RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 RALBP1Q15311 655 aa22.34■■□□□ 1.17
HMGN1-203ENST00000380748 SUPT20HL1Q3ZLR7 823 aa22.34■■□□□ 1.17
HMGN1-203ENST00000380748 CD209Q9NNX6 404 aa22.34■■□□□ 1.17
HMGN1-203ENST00000380748 PTCH2Q9Y6C5 1203 aa22.34■■□□□ 1.17
HMGN1-203ENST00000380748 RANBP2P49792 3224 aaKnown RBP22.34■■□□□ 1.17
HMGN1-203ENST00000380748 USP2O75604 605 aaPredicted RBP22.33■■□□□ 1.17
HMGN1-203ENST00000380748 IREB2P48200 963 aaKnown RBP22.33■■□□□ 1.17
HMGN1-203ENST00000380748 VEZTQ9HBM0 779 aa22.33■■□□□ 1.17
HMGN1-203ENST00000380748 SPDYE2BA6NHP3 402 aa22.32■■□□□ 1.16
HMGN1-203ENST00000380748 F8W031 263 aaPredicted RBP22.32■■□□□ 1.16
HMGN1-203ENST00000380748 H0YGN5 161 aa22.32■■□□□ 1.16
HMGN1-203ENST00000380748 MYCP01106 439 aaPredicted RBP22.32■■□□□ 1.16
HMGN1-203ENST00000380748 SPDYE6P0CI01 402 aa22.32■■□□□ 1.16
HMGN1-203ENST00000380748 CWF19L2Q2TBE0 894 aaKnown RBP22.32■■□□□ 1.16
HMGN1-203ENST00000380748 CFAP100Q494V2 611 aa22.32■■□□□ 1.16
HMGN1-203ENST00000380748 SLC9C1Q4G0N8 1177 aa22.32■■□□□ 1.16
HMGN1-203ENST00000380748 ANKRD13AQ8IZ07 590 aa22.32■■□□□ 1.16
HMGN1-203ENST00000380748 C8orf58Q8NAV2 365 aa22.32■■□□□ 1.16
HMGN1-203ENST00000380748 ANKRD2Q9GZV1 360 aa22.32■■□□□ 1.16
HMGN1-203ENST00000380748 PI4KAP2A4QPH2 592 aa22.31■■□□□ 1.16
HMGN1-203ENST00000380748 SNAP23O00161 211 aa22.31■■□□□ 1.16
HMGN1-203ENST00000380748 KCNJ4P48050 445 aa22.31■■□□□ 1.16
HMGN1-203ENST00000380748 WDR43Q15061 677 aaKnown RBP eCLIP22.31■■□□□ 1.16
HMGN1-203ENST00000380748 SLC4A8Q2Y0W8 1093 aa22.31■■□□□ 1.16
HMGN1-203ENST00000380748 KSR2Q6VAB6 950 aa22.31■■□□□ 1.16
HMGN1-203ENST00000380748 UBE3BQ7Z3V4 1068 aa22.31■■□□□ 1.16
HMGN1-203ENST00000380748 PI4KAP1Q8N8J0 262 aa22.31■■□□□ 1.16
HMGN1-203ENST00000380748 OTUD5Q96G74 571 aa22.31■■□□□ 1.16
HMGN1-203ENST00000380748 PRMT6Q96LA8 375 aaPredicted RBP22.31■■□□□ 1.16
HMGN1-203ENST00000380748 ELP3Q9H9T3 547 aa22.31■■□□□ 1.16
HMGN1-203ENST00000380748 ADAMTS8Q9UP79 889 aa22.31■■□□□ 1.16
HMGN1-203ENST00000380748 MYO1BO43795 1136 aa22.3■■□□□ 1.16
HMGN1-203ENST00000380748 ITGA6P23229 1130 aa22.3■■□□□ 1.16
HMGN1-203ENST00000380748 OPTNQ96CV9 577 aa22.3■■□□□ 1.16
HMGN1-203ENST00000380748 MS4A4AQ96JQ5 239 aa22.3■■□□□ 1.16
HMGN1-203ENST00000380748 MPHOSPH8Q99549 860 aa22.3■■□□□ 1.16
HMGN1-203ENST00000380748 IFT57Q9NWB7 429 aa22.3■■□□□ 1.16
HMGN1-203ENST00000380748 IRS2Q9Y4H2 1338 aa22.3■■□□□ 1.16
HMGN1-203ENST00000380748 NEURL1BA8MQ27 555 aa22.29■■□□□ 1.16
HMGN1-203ENST00000380748 CHRNDQ07001 517 aa22.29■■□□□ 1.16
HMGN1-203ENST00000380748 RASA3Q14644 834 aa22.29■■□□□ 1.16
HMGN1-203ENST00000380748 CCDC30Q5VVM6 783 aa22.29■■□□□ 1.16
HMGN1-203ENST00000380748 NBPF11Q86T75 865 aa22.29■■□□□ 1.16
HMGN1-203ENST00000380748 CNKSR2Q8WXI2 1034 aa22.28■■□□□ 1.16
HMGN1-203ENST00000380748 BRI3BPQ8WY22 251 aa22.28■■□□□ 1.16
HMGN1-203ENST00000380748 JAG2Q9Y219 1238 aa22.28■■□□□ 1.16
HMGN1-203ENST00000380748 ZSWIM8A7E2V4 1837 aa22.27■■□□□ 1.16
HMGN1-203ENST00000380748 H7C1W4 665 aa22.27■■□□□ 1.16
HMGN1-203ENST00000380748 GNAI1P63096 354 aa22.27■■□□□ 1.16
HMGN1-203ENST00000380748 NEXNQ0ZGT2 675 aa22.27■■□□□ 1.16
HMGN1-203ENST00000380748 TAF1CQ15572 869 aaPredicted RBP22.27■■□□□ 1.16
HMGN1-203ENST00000380748 MYBBP1AQ9BQG0 1328 aaKnown RBP22.27■■□□□ 1.16
HMGN1-203ENST00000380748 CHRDL2Q6WN34 429 aa22.26■■□□□ 1.15
HMGN1-203ENST00000380748 TSPYL6Q8N831 410 aa22.26■■□□□ 1.15
HMGN1-203ENST00000380748 SH3TC2Q8TF17 1288 aa22.26■■□□□ 1.15
HMGN1-203ENST00000380748 A0A1B0GUL6 1792 aa22.25■■□□□ 1.15
HMGN1-203ENST00000380748 TAF5LO75529 589 aa22.25■■□□□ 1.15
HMGN1-203ENST00000380748 RBM5P52756 815 aaKnown RBP eCLIP22.25■■□□□ 1.15
HMGN1-203ENST00000380748 ARHGEF6Q15052 776 aa22.25■■□□□ 1.15
HMGN1-203ENST00000380748 CDAN1Q8IWY9 1227 aa22.25■■□□□ 1.15
HMGN1-203ENST00000380748 FAM43AQ8N2R8 423 aa22.25■■□□□ 1.15
HMGN1-203ENST00000380748 HELBQ8NG08 1087 aaPredicted RBP22.25■■□□□ 1.15
HMGN1-203ENST00000380748 PLA2G12BQ9BX93 195 aa22.25■■□□□ 1.15
HMGN1-203ENST00000380748 ZFYVE28Q9HCC9 887 aa22.25■■□□□ 1.15
HMGN1-203ENST00000380748 CCL15-CCL14A0A0B4J2E2 113 aa22.24■■□□□ 1.15
HMGN1-203ENST00000380748 CCL15Q16663 113 aa22.24■■□□□ 1.15
HMGN1-203ENST00000380748 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.24■■□□□ 1.15
HMGN1-203ENST00000380748 C15orf52Q6ZUT6 534 aaKnown RBP22.24■■□□□ 1.15
HMGN1-203ENST00000380748 ARHGAP39Q9C0H5 1083 aa22.24■■□□□ 1.15
HMGN1-203ENST00000380748 CSF1RP07333 972 aa22.23■■□□□ 1.15
HMGN1-203ENST00000380748 IL1R1P14778 569 aa22.23■■□□□ 1.15
HMGN1-203ENST00000380748 FKBP1AP62942 108 aaKnown RBP22.23■■□□□ 1.15
HMGN1-203ENST00000380748 CASP7P55210 303 aa22.22■■□□□ 1.15
HMGN1-203ENST00000380748 VGLL4Q14135 290 aa22.22■■□□□ 1.15
HMGN1-203ENST00000380748 GCKRQ14397 625 aa22.22■■□□□ 1.15
HMGN1-203ENST00000380748 ZNF804AQ7Z570 1209 aa22.22■■□□□ 1.15
HMGN1-203ENST00000380748 RBM27Q9P2N5 1060 aaKnown RBP22.22■■□□□ 1.15
HMGN1-203ENST00000380748 APAF1O14727 1248 aa22.21■■□□□ 1.15
HMGN1-203ENST00000380748 GTF2A2P52657 109 aa22.21■■□□□ 1.15
HMGN1-203ENST00000380748 CALD1Q05682 793 aaKnown RBP22.21■■□□□ 1.15
HMGN1-203ENST00000380748 SPDYE2Q495Y8 402 aa22.21■■□□□ 1.15
HMGN1-203ENST00000380748 G2E3Q7L622 706 aa22.21■■□□□ 1.15
HMGN1-203ENST00000380748 TEPSINQ96N21 525 aa22.21■■□□□ 1.15
HMGN1-203ENST00000380748 ZNF70Q9UC06 446 aaPredicted RBP22.21■■□□□ 1.15
HMGN1-203ENST00000380748 SHISA4Q96DD7 197 aa22.2■■□□□ 1.14
HMGN1-203ENST00000380748 CHMP4AQ9BY43 222 aa22.2■■□□□ 1.14
HMGN1-203ENST00000380748 TDRD3Q9H7E2 651 aaKnown RBP22.2■■□□□ 1.14
HMGN1-203ENST00000380748 A0A0C4DFX4 3053 aa22.2■■□□□ 1.14
HMGN1-203ENST00000380748 ANKRD18BA2A2Z9 1011 aa22.19■■□□□ 1.14
HMGN1-203ENST00000380748 TNFAIP1Q13829 316 aa22.19■■□□□ 1.14
HMGN1-203ENST00000380748 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.19■■□□□ 1.14
HMGN1-203ENST00000380748 COL6A3P12111 3177 aa22.18■■□□□ 1.14
HMGN1-203ENST00000380748 ARAP2Q8WZ64 1704 aa22.18■■□□□ 1.14
HMGN1-203ENST00000380748 LACTBP83111 547 aaPredicted RBP22.18■■□□□ 1.14
HMGN1-203ENST00000380748 DPF3Q92784 378 aa22.18■■□□□ 1.14
HMGN1-203ENST00000380748 STK31Q9BXU1 1019 aa22.18■■□□□ 1.14
HMGN1-203ENST00000380748 TMEM39BQ9GZU3 492 aa22.18■■□□□ 1.14
HMGN1-203ENST00000380748 TCP10L2B9ZVM9 353 aa22.17■■□□□ 1.14
HMGN1-203ENST00000380748 TLR2O60603 784 aa22.17■■□□□ 1.14
HMGN1-203ENST00000380748 ECM2O94769 699 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms