RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 PDILTQ8N807 584 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 XAGE2Q96GT9 111 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 PUS7Q96PZ0 661 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 MAF1Q9H063 256 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 HOMER3Q9NSC5 361 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 TRPM1Q7Z4N2 1603 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 REREQ9P2R6 1566 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 EPB41L2O43491 1005 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 ZEB2O60315 1214 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 TMPOP42166 694 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 PDE1AP54750 535 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 SF3B2Q13435 895 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 STIM1Q13586 685 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 GNPTABQ3T906 1256 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 RINLQ6ZS11 566 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 RIPOR2Q9Y4F9 1068 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 EIF3HO15372 352 aaKnown RBP eCLIP9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 PRPF6O94906 941 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 PPFIA1Q13136 1202 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 DBN1Q16643 649 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 KIF4BQ2VIQ3 1234 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 FILIP1LQ4L180 1135 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 NCAPG2Q86XI2 1143 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 CCDC13Q8IYE1 715 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 DDX54Q8TDD1 881 aaKnown RBP9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 PGBD1Q96JS3 809 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 BATF3Q9NR55 127 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 RTEL1Q9NZ71 1219 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 PCDHGA4Q9Y5G9 962 aa9.69□□□□□ -0.86
NHLRC3-201ENST00000379599 SETD1BQ9UPS6 1966 aaKnown RBP9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 GOLGA6L7A0A1B0GV03 622 aa9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 MAP4K4O95819 1239 aaPredicted RBP9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 GGCXP38435 758 aa9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 CCDC50Q8IVM0 306 aa9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 BLOC1S6Q9UL45 172 aa9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 SHOX2O60902 331 aaPredicted RBP9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 LMOD1P29536 600 aaPredicted RBP9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 SLC8A1P32418 973 aa9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 ACCSLQ4AC99 568 aa9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 HSP90AB2PQ58FF8 381 aa9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 PRPF40BQ6NWY9 871 aaKnown RBP9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 CCDC73Q6ZRK6 1079 aa9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 ARL10Q8N8L6 244 aa9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 OR8K1Q8NGG5 319 aa9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 ZNF396Q96N95 335 aaPredicted RBP9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 SLC39A2Q9NP94 309 aa9.68□□□□□ -0.86
NHLRC3-201ENST00000379599 BUB1BO60566 1050 aaPredicted RBP9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 MYBL1P10243 752 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 MYO1EQ12965 1108 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 IFT88Q13099 833 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 CYB5D1Q6P9G0 228 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 MSANTD4Q8NCY6 345 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 VCPKMTQ9H867 229 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 LZTFL1Q9NQ48 299 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 TPX2Q9ULW0 747 aaKnown RBP9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 IQSEC2Q5JU85 1478 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 GOLGA6L9A6NEM1 432 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 RASSF9O75901 435 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 FCHSD2O94868 740 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 RRP12Q5JTH9 1297 aaKnown RBP9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 KIAA0825Q8IV33 1275 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 TMTC2Q8N394 836 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 NSMCE1Q8WV22 266 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 SDF4Q9BRK5 362 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 DESI2Q9BSY9 194 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 RGL1Q9NZL6 768 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 TRIM35Q9UPQ4 493 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 PRDM15P57071 1507 aaPredicted RBP9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 CTAGE15A4D2H0 777 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 ATP2C2O75185 946 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 SERPINC1P01008 464 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 TFRCP02786 760 aaKnown RBP9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 CTAGE8P0CG41 777 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 CTAGE6Q86UF2 777 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 CCAR1Q8IX12 1150 aaKnown RBP9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 CTAGE4Q8IX94 777 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 MAB21L3Q8N8X9 362 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 TCP11Q8WWU5 503 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 TBC1D5Q92609 795 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 SPAG5Q96R06 1193 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 EPAS1Q99814 870 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 TRIM4Q9C037 500 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 TTC21AQ8NDW8 1320 aa9.67□□□□□ -0.86
NHLRC3-201ENST00000379599 WDR62O43379 1518 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 BIN1O00499 593 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 IMPDH2P12268 514 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 PAX3P23760 479 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 ZRSR2Q15696 482 aaKnown RBP9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 CFAP100Q494V2 611 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 PROCA1Q8NCQ7 364 aaPredicted RBP9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 KIFC2Q96AC6 838 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 CEP170Q5SW79 1584 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 YTHDC2Q9H6S0 1430 aaKnown RBP9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 ARHGAP6O43182 974 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 HSPA4P34932 840 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 PAPOLAP51003 745 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms