RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 LIN9Q5TKA1 542 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 VCX3AQ9NNX9 186 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 SEC62Q99442 399 aaKnown RBP12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 I3L4J1 428 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 RPAP2Q8IXW5 612 aaPredicted RBP12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 FAM8A1Q9UBU6 413 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 SSFA2P28290 1259 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 SH2D4AQ9H788 454 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 ZNF277Q9NRM2 450 aaPredicted RBP12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 PARP3Q9Y6F1 533 aa12.62□□□□□ -0.39
PTCHD1-201ENST00000379361 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 ALDH1L2Q3SY69 923 aa12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 ZSCAN16Q9H4T2 348 aaPredicted RBP12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 UBASH3AP57075 661 aa12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 GBP6Q6ZN66 633 aa12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 RIOK1Q9BRS2 568 aaKnown RBP12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 ARID5AQ03989 594 aa12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 FERMT3Q86UX7 667 aa12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 EXOC6BQ9Y2D4 811 aa12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 PFDN6O15212 129 aa12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 VAV2P52735 878 aa12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 OATP04181 439 aa12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 LGSNQ5TDP6 509 aa12.61□□□□□ -0.39
PTCHD1-201ENST00000379361 APC2O95996 2303 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 KIF14Q15058 1648 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 CALCOCO2Q13137 446 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 SLC5A4Q9NY91 659 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 EXOC7Q9UPT5 735 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 CCDC25Q86WR0 208 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 UBL4BQ8N7F7 174 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 FYB2Q5VWT5 728 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 CCDC26Q8TAB7 109 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 KCNK9Q9NPC2 374 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 NKIRAS1Q9NYS0 192 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 HVCN1Q96D96 273 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 TPRP12270 2363 aaKnown RBP12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 MAPK8IP2Q13387 824 aaPredicted RBP12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 SRRTQ9BXP5 876 aaKnown RBP12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 NR1I2O75469 434 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 ANKRD24Q8TF21 1146 aa12.6□□□□□ -0.39
PTCHD1-201ENST00000379361 ARFGAP3Q9NP61 516 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 UTP11Q9Y3A2 253 aaKnown RBP12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 GTF2F1P35269 517 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 KRT79Q5XKE5 535 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 CLGNO14967 610 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 SLC12A2P55011 1212 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 KIF22Q14807 665 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 SDCCAG8Q86SQ7 713 aaPredicted RBP12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 C10orf67Q8IYJ2 551 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 EYA3Q99504 573 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 PIK3R4Q99570 1358 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 BIN1O00499 593 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 KIF11P52732 1056 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 ABCC11Q96J66 1382 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 ZBTB43O43298 467 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 RSRC1Q96IZ7 334 aaKnown RBP12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 IPO11Q9UI26 975 aaKnown RBP12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 ATP5J2-PTCD1G3V325 749 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 BIRC3Q13489 604 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 ATP2A3Q93084 1043 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 GPTP24298 496 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 DKC1O60832 514 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 CCDC88CQ9P219 2028 aa12.59□□□□□ -0.39
PTCHD1-201ENST00000379361 ARHGEF6Q15052 776 aa12.58□□□□□ -0.39
PTCHD1-201ENST00000379361 TTC21BQ7Z4L5 1316 aa12.58□□□□□ -0.39
PTCHD1-201ENST00000379361 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.39
PTCHD1-201ENST00000379361 INPP1P49441 399 aa12.58□□□□□ -0.39
PTCHD1-201ENST00000379361 INTS8Q75QN2 995 aaKnown RBP12.58□□□□□ -0.39
PTCHD1-201ENST00000379361 BCAP29Q9UHQ4 241 aa12.58□□□□□ -0.39
PTCHD1-201ENST00000379361 NAIPQ13075 1403 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 ZSCAN30Q86W11 494 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 KRT86O43790 486 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 AKNAD1Q5T1N1 836 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 ARHGAP24Q8N264 748 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 NEK1Q96PY6 1258 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 CCDC42Q96M95 316 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 PALM3A6NDB9 673 aaPredicted RBP12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 CERS3Q8IU89 383 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 ESYT2A0FGR8 921 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 TYW5A2RUC4 315 aaKnown RBP12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 CPLX4Q7Z7G2 160 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 NLRP3Q96P20 1036 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 P4HA1P13674 534 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 TNNC1P63316 161 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 KCNG4Q8TDN1 519 aa12.58□□□□□ -0.4
PTCHD1-201ENST00000379361 DIXDC1Q155Q3 683 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 NAA25Q14CX7 972 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 MAP3K2Q9Y2U5 619 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 PPP1R21Q6ZMI0 780 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 PPP4R1Q8TF05 950 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 ARID1BQ8NFD5 2236 aaPredicted RBP12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 ATAD2BQ9ULI0 1458 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 HMGB3O15347 200 aaKnown RBP12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 CYP7A1P22680 504 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 KRT2P35908 639 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 CASC4Q6P4E1 433 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 LDHAL6AQ6ZMR3 332 aa12.57□□□□□ -0.4
PTCHD1-201ENST00000379361 RABGAP1Q9Y3P9 1069 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms