RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 CHRNDQ07001 517 aa17.04■□□□□ 0.32
UPK1A-202ENST00000379013 B4GALNT3Q6L9W6 998 aa17.04■□□□□ 0.32
UPK1A-202ENST00000379013 USP48Q86UV5 1035 aa17.04■□□□□ 0.32
UPK1A-202ENST00000379013 KLHDC4Q8TBB5 520 aa17.04■□□□□ 0.32
UPK1A-202ENST00000379013 GPR108Q9NPR9 543 aa17.04■□□□□ 0.32
UPK1A-202ENST00000379013 IGHDP01880 384 aa17.03■□□□□ 0.32
UPK1A-202ENST00000379013 KCNJ4P48050 445 aa17.03■□□□□ 0.32
UPK1A-202ENST00000379013 RSBN1LQ6PCB5 846 aaPredicted RBP17.03■□□□□ 0.32
UPK1A-202ENST00000379013 RHPN1Q8TCX5 695 aa17.03■□□□□ 0.32
UPK1A-202ENST00000379013 ZC3H15Q8WU90 426 aaKnown RBP17.03■□□□□ 0.32
UPK1A-202ENST00000379013 RIPOR2Q9Y4F9 1068 aa17.03■□□□□ 0.32
UPK1A-202ENST00000379013 ZNF280AP59817 542 aaPredicted RBP17.02■□□□□ 0.32
UPK1A-202ENST00000379013 PUM3Q15397 648 aaKnown RBP17.02■□□□□ 0.32
UPK1A-202ENST00000379013 DEFB115Q30KQ5 88 aa17.02■□□□□ 0.32
UPK1A-202ENST00000379013 GPATCH3Q96I76 525 aa17.02■□□□□ 0.32
UPK1A-202ENST00000379013 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
UPK1A-202ENST00000379013 POLR2AP24928 1970 aaKnown RBP17.02■□□□□ 0.31
UPK1A-202ENST00000379013 MYH13Q9UKX3 1938 aa17.02■□□□□ 0.31
UPK1A-202ENST00000379013 ZNF804BA4D1E1 1349 aa17.01■□□□□ 0.31
UPK1A-202ENST00000379013 PDE8BO95263 885 aa17.01■□□□□ 0.31
UPK1A-202ENST00000379013 RPS12P25398 132 aaKnown RBP17.01■□□□□ 0.31
UPK1A-202ENST00000379013 LRRC24Q50LG9 513 aa17.01■□□□□ 0.31
UPK1A-202ENST00000379013 DACT2Q5SW24 774 aa17.01■□□□□ 0.31
UPK1A-202ENST00000379013 ANKRD45Q5TZF3 282 aa17.01■□□□□ 0.31
UPK1A-202ENST00000379013 ATG9AQ7Z3C6 839 aa17.01■□□□□ 0.31
UPK1A-202ENST00000379013 PODNQ7Z5L7 613 aa17.01■□□□□ 0.31
UPK1A-202ENST00000379013 SCAF8Q9UPN6 1271 aaKnown RBP17.01■□□□□ 0.31
UPK1A-202ENST00000379013 LEMD3Q9Y2U8 911 aa17.01■□□□□ 0.31
UPK1A-202ENST00000379013 USP17L3A6NCW0 530 aa17■□□□□ 0.31
UPK1A-202ENST00000379013 USP17L4A6NCW7 530 aa17■□□□□ 0.31
UPK1A-202ENST00000379013 G3V3G9 751 aa17■□□□□ 0.31
UPK1A-202ENST00000379013 APBB1O00213 710 aa17■□□□□ 0.31
UPK1A-202ENST00000379013 ZNF609O15014 1411 aa17■□□□□ 0.31
UPK1A-202ENST00000379013 CELF2O95319 508 aaKnown RBP17■□□□□ 0.31
UPK1A-202ENST00000379013 IFIT1P09914 478 aaKnown RBP17■□□□□ 0.31
UPK1A-202ENST00000379013 SLC5A1P13866 664 aa17■□□□□ 0.31
UPK1A-202ENST00000379013 NUCB1Q02818 461 aa17■□□□□ 0.31
UPK1A-202ENST00000379013 UBE4AQ14139 1066 aa17■□□□□ 0.31
UPK1A-202ENST00000379013 DCAF8Q5TAQ9 597 aa17■□□□□ 0.31
UPK1A-202ENST00000379013 USP17L1Q7RTZ2 530 aa17■□□□□ 0.31
UPK1A-202ENST00000379013 ABT1Q9ULW3 272 aaKnown RBP17■□□□□ 0.31
UPK1A-202ENST00000379013 MED23Q9ULK4 1368 aa17■□□□□ 0.31
UPK1A-202ENST00000379013 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
UPK1A-202ENST00000379013 IFIT2P09913 472 aaKnown RBP16.99■□□□□ 0.31
UPK1A-202ENST00000379013 ATP2B3Q16720 1220 aa16.99■□□□□ 0.31
UPK1A-202ENST00000379013 IFFO2Q5TF58 517 aa16.99■□□□□ 0.31
UPK1A-202ENST00000379013 CYP4F22Q6NT55 531 aa16.99■□□□□ 0.31
UPK1A-202ENST00000379013 CDC37L1Q7L3B6 337 aa16.99■□□□□ 0.31
UPK1A-202ENST00000379013 CHD1LQ86WJ1 897 aa16.99■□□□□ 0.31
UPK1A-202ENST00000379013 LPIN2Q92539 896 aa16.99■□□□□ 0.31
UPK1A-202ENST00000379013 TLL2Q9Y6L7 1015 aa16.99■□□□□ 0.31
UPK1A-202ENST00000379013 WDR33Q9C0J8 1336 aaKnown RBP16.98■□□□□ 0.31
UPK1A-202ENST00000379013 FOXN1O15353 648 aa16.98■□□□□ 0.31
UPK1A-202ENST00000379013 SASH1O94885 1247 aa16.98■□□□□ 0.31
UPK1A-202ENST00000379013 TFCP2Q12800 502 aa16.98■□□□□ 0.31
UPK1A-202ENST00000379013 SCARF1Q14162 830 aa16.98■□□□□ 0.31
UPK1A-202ENST00000379013 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
UPK1A-202ENST00000379013 SAPCD2Q86UD0 394 aa16.98■□□□□ 0.31
UPK1A-202ENST00000379013 AGBL3Q8NEM8 1001 aa16.98■□□□□ 0.31
UPK1A-202ENST00000379013 COA1Q9GZY4 146 aa16.98■□□□□ 0.31
UPK1A-202ENST00000379013 AOC2O75106 756 aa16.97■□□□□ 0.31
UPK1A-202ENST00000379013 TNNI3KQ59H18 835 aa16.97■□□□□ 0.31
UPK1A-202ENST00000379013 VGLL2Q8N8G2 317 aa16.97■□□□□ 0.31
UPK1A-202ENST00000379013 ZIC5Q96T25 663 aa16.97■□□□□ 0.31
UPK1A-202ENST00000379013 ZNF408Q9H9D4 720 aa16.97■□□□□ 0.31
UPK1A-202ENST00000379013 CD209Q9NNX6 404 aa16.97■□□□□ 0.31
UPK1A-202ENST00000379013 WBP1LQ9NX94 342 aa16.97■□□□□ 0.31
UPK1A-202ENST00000379013 FPGT-TNNI3KV9GXZ4 949 aa16.97■□□□□ 0.31
UPK1A-202ENST00000379013 USP17L8P0C7I0 530 aa16.96■□□□□ 0.31
UPK1A-202ENST00000379013 NBPF9Q3BBW0 867 aa16.96■□□□□ 0.31
UPK1A-202ENST00000379013 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.31
UPK1A-202ENST00000379013 GORABQ5T7V8 394 aa16.96■□□□□ 0.31
UPK1A-202ENST00000379013 KRT26Q7Z3Y9 468 aa16.96■□□□□ 0.31
UPK1A-202ENST00000379013 AACSQ86V21 672 aa16.96■□□□□ 0.31
UPK1A-202ENST00000379013 CERS5Q8N5B7 392 aa16.96■□□□□ 0.31
UPK1A-202ENST00000379013 IL1RAPL2Q9NP60 686 aa16.96■□□□□ 0.31
UPK1A-202ENST00000379013 A0A1B0GUL7 405 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 GTF2IP78347 998 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 CCDC158Q5M9N0 1113 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 STRIP1Q5VSL9 837 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 C15orf52Q6ZUT6 534 aaKnown RBP16.95■□□□□ 0.3
UPK1A-202ENST00000379013 VPS37DQ86XT2 251 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 CAPNS2Q96L46 248 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 NEUROD6Q96NK8 337 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 LNPKQ9C0E8 428 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 MYOZ2Q9NPC6 264 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
UPK1A-202ENST00000379013 GGA3Q9NZ52 723 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 PCDHAC2Q9Y5I4 1007 aa16.95■□□□□ 0.3
UPK1A-202ENST00000379013 AK9Q5TCS8 1911 aa16.94■□□□□ 0.3
UPK1A-202ENST00000379013 ERC2O15083 957 aa16.94■□□□□ 0.3
UPK1A-202ENST00000379013 GRM1Q13255 1194 aa16.94■□□□□ 0.3
UPK1A-202ENST00000379013 ANGEL2Q5VTE6 544 aaKnown RBP16.94■□□□□ 0.3
UPK1A-202ENST00000379013 PRAMEF18Q5VWM3 479 aa16.94■□□□□ 0.3
UPK1A-202ENST00000379013 JAG2Q9Y219 1238 aa16.94■□□□□ 0.3
UPK1A-202ENST00000379013 AOX1Q06278 1338 aa16.94■□□□□ 0.3
UPK1A-202ENST00000379013 TTC41PQ6P2S7 1318 aa16.94■□□□□ 0.3
UPK1A-202ENST00000379013 ZNF646O15015 1829 aaPredicted RBP16.93■□□□□ 0.3
UPK1A-202ENST00000379013 TRPM7Q96QT4 1865 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms