RNA–Protein interactions for RNA: ENST00000378206.5

DFFB-204, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-204ENST00000378206 ZNF335Q9H4Z2 1342 aaPredicted RBP17.65■□□□□ 0.42
DFFB-204ENST00000378206 CPDO75976 1380 aa17.64■□□□□ 0.42
DFFB-204ENST00000378206 CARMIL3Q8ND23 1372 aa17.64■□□□□ 0.42
DFFB-204ENST00000378206 CIAO1O76071 339 aa17.64■□□□□ 0.41
DFFB-204ENST00000378206 NKX1-1Q15270 411 aaPredicted RBP17.64■□□□□ 0.41
DFFB-204ENST00000378206 IMMTQ16891 758 aaKnown RBP17.64■□□□□ 0.41
DFFB-204ENST00000378206 BTG4Q9NY30 223 aa17.64■□□□□ 0.41
DFFB-204ENST00000378206 ORC3Q9UBD5 711 aaPredicted RBP17.64■□□□□ 0.41
DFFB-204ENST00000378206 ZBTB1Q9Y2K1 713 aa17.64■□□□□ 0.41
DFFB-204ENST00000378206 KIF28PB7ZC32 967 aa17.64■□□□□ 0.41
DFFB-204ENST00000378206 PHKA1P46020 1223 aa17.64■□□□□ 0.41
DFFB-204ENST00000378206 NAA16Q6N069 864 aaPredicted RBP17.64■□□□□ 0.41
DFFB-204ENST00000378206 KIF6Q6ZMV9 814 aa17.64■□□□□ 0.41
DFFB-204ENST00000378206 NBPF3Q9H094 633 aa17.64■□□□□ 0.41
DFFB-204ENST00000378206 PIH1D3Q9NQM4 214 aaKnown RBP17.64■□□□□ 0.41
DFFB-204ENST00000378206 SPTLC3Q9NUV7 552 aa17.64■□□□□ 0.41
DFFB-204ENST00000378206 TRMT112Q9UI30 125 aaKnown RBP17.64■□□□□ 0.41
DFFB-204ENST00000378206 RIPOR2Q9Y4F9 1068 aa17.64■□□□□ 0.41
DFFB-204ENST00000378206 SALL1Q9NSC2 1324 aa17.64■□□□□ 0.41
DFFB-204ENST00000378206 ZNF213O14771 459 aa17.63■□□□□ 0.41
DFFB-204ENST00000378206 MARCKSP29966 332 aaPredicted RBP17.63■□□□□ 0.41
DFFB-204ENST00000378206 NDUFA8P51970 172 aa17.63■□□□□ 0.41
DFFB-204ENST00000378206 FILIP1Q7Z7B0 1213 aa17.63■□□□□ 0.41
DFFB-204ENST00000378206 ZBTB38Q8NAP3 1195 aaPredicted RBP17.63■□□□□ 0.41
DFFB-204ENST00000378206 MYRIPQ8NFW9 859 aa17.63■□□□□ 0.41
DFFB-204ENST00000378206 PHKBQ93100 1093 aa17.63■□□□□ 0.41
DFFB-204ENST00000378206 ZNF274Q96GC6 653 aaPredicted RBP17.63■□□□□ 0.41
DFFB-204ENST00000378206 SDF4Q9BRK5 362 aa17.63■□□□□ 0.41
DFFB-204ENST00000378206 CLIP2Q9UDT6 1046 aa17.63■□□□□ 0.41
DFFB-204ENST00000378206 HMGN5P82970 282 aaKnown RBP17.63■□□□□ 0.41
DFFB-204ENST00000378206 IQCB1Q15051 598 aa17.63■□□□□ 0.41
DFFB-204ENST00000378206 ZNF710Q8N1W2 664 aa17.63■□□□□ 0.41
DFFB-204ENST00000378206 CCDC73Q6ZRK6 1079 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 NLRP10Q86W26 655 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 ENGASEQ8NFI3 743 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 C8orf76Q96K31 380 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 GLI3P10071 1580 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 DYNC1I1O14576 645 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 CPLX1O14810 134 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 KINO60870 393 aaKnown RBP17.62■□□□□ 0.41
DFFB-204ENST00000378206 PDIA4P13667 645 aaKnown RBP17.62■□□□□ 0.41
DFFB-204ENST00000378206 SF3A1Q15459 793 aaKnown RBP17.62■□□□□ 0.41
DFFB-204ENST00000378206 ZSCAN25Q6NSZ9 544 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 CYB5R4Q7L1T6 521 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 WWC3Q9ULE0 1092 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 IRS4O14654 1257 aaPredicted RBP17.62■□□□□ 0.41
DFFB-204ENST00000378206 RIOK3O14730 519 aaKnown RBP17.62■□□□□ 0.41
DFFB-204ENST00000378206 PCCAP05165 728 aaPredicted RBP17.62■□□□□ 0.41
DFFB-204ENST00000378206 CSF1RP07333 972 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 PLA2G4DQ86XP0 818 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 TBC1D10CQ8IV04 446 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 CCDC82Q8N4S0 544 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 AKAP2Q9Y2D5 859 aa17.62■□□□□ 0.41
DFFB-204ENST00000378206 B4E1Z4 1266 aa17.61■□□□□ 0.41
DFFB-204ENST00000378206 RALYLQ86SE5 291 aaKnown RBP17.61■□□□□ 0.41
DFFB-204ENST00000378206 MB21D2Q8IYB1 491 aaPredicted RBP17.61■□□□□ 0.41
DFFB-204ENST00000378206 TDRD7Q8NHU6 1098 aaKnown RBP17.61■□□□□ 0.41
DFFB-204ENST00000378206 APPBP2Q92624 585 aa17.61■□□□□ 0.41
DFFB-204ENST00000378206 KIF1AQ12756 1690 aa17.61■□□□□ 0.41
DFFB-204ENST00000378206 COL5A2P05997 1499 aaPredicted RBP17.61■□□□□ 0.41
DFFB-204ENST00000378206 GOLGA6L19H0YKK7 550 aa17.61■□□□□ 0.41
DFFB-204ENST00000378206 NAA30Q147X3 362 aaPredicted RBP17.61■□□□□ 0.41
DFFB-204ENST00000378206 KCPQ6ZWJ8 1503 aa17.6■□□□□ 0.41
DFFB-204ENST00000378206 RFX7Q2KHR2 1363 aa17.6■□□□□ 0.41
DFFB-204ENST00000378206 WTIPA6NIX2 430 aaPredicted RBP17.6■□□□□ 0.41
DFFB-204ENST00000378206 BECN2A8MW95 431 aa17.6■□□□□ 0.41
DFFB-204ENST00000378206 GOLGA6L6A8MZA4 724 aa17.6■□□□□ 0.41
DFFB-204ENST00000378206 PTPN21Q16825 1174 aa17.6■□□□□ 0.41
DFFB-204ENST00000378206 GIGYF2Q6Y7W6 1299 aaKnown RBP17.6■□□□□ 0.41
DFFB-204ENST00000378206 MICU3Q86XE3 530 aa17.6■□□□□ 0.41
DFFB-204ENST00000378206 IQSEC3Q9UPP2 1182 aaPredicted RBP17.6■□□□□ 0.41
DFFB-204ENST00000378206 STARD3NLO95772 234 aa17.6■□□□□ 0.41
DFFB-204ENST00000378206 STK38Q15208 465 aa17.6■□□□□ 0.41
DFFB-204ENST00000378206 AOPEPQ8N6M6 819 aa17.6■□□□□ 0.41
DFFB-204ENST00000378206 USP27XA6NNY8 438 aa17.59■□□□□ 0.41
DFFB-204ENST00000378206 NCOA7Q8NI08 942 aa17.59■□□□□ 0.41
DFFB-204ENST00000378206 ZNF532Q9HCE3 1301 aa17.59■□□□□ 0.41
DFFB-204ENST00000378206 FAM160A1Q05DH4 1040 aa17.59■□□□□ 0.41
DFFB-204ENST00000378206 CMTR1Q8N1G2 835 aaKnown RBP17.59■□□□□ 0.41
DFFB-204ENST00000378206 LINC00301Q8NCQ3 95 aa17.59■□□□□ 0.41
DFFB-204ENST00000378206 FBXO18Q8NFZ0 1043 aa17.59■□□□□ 0.41
DFFB-204ENST00000378206 ZNF396Q96N95 335 aaPredicted RBP17.59■□□□□ 0.41
DFFB-204ENST00000378206 SEC31BQ9NQW1 1179 aa17.59■□□□□ 0.41
DFFB-204ENST00000378206 CTNNA3Q9UI47 895 aa17.59■□□□□ 0.41
DFFB-204ENST00000378206 MAP3K15Q6ZN16 1313 aa17.58■□□□□ 0.41
DFFB-204ENST00000378206 SMIM22K7EJ46 135 aa17.58■□□□□ 0.41
DFFB-204ENST00000378206 CDC27P30260 824 aa17.58■□□□□ 0.41
DFFB-204ENST00000378206 DPCR1Q3MIW9 517 aa17.58■□□□□ 0.41
DFFB-204ENST00000378206 CCDC102BQ68D86 513 aa17.58■□□□□ 0.41
DFFB-204ENST00000378206 DHX40Q8IX18 779 aaKnown RBP17.58■□□□□ 0.41
DFFB-204ENST00000378206 ZNF592Q92610 1267 aa17.58■□□□□ 0.41
DFFB-204ENST00000378206 ZKSCAN3Q9BRR0 538 aa17.58■□□□□ 0.41
DFFB-204ENST00000378206 LMTK3Q96Q04 1460 aa17.58■□□□□ 0.41
DFFB-204ENST00000378206 CTDSPL2Q05D32 466 aa17.58■□□□□ 0.4
DFFB-204ENST00000378206 FMR1NBQ8N0W7 255 aaPredicted RBP17.58■□□□□ 0.4
DFFB-204ENST00000378206 TRMT1Q9NXH9 659 aaKnown RBP17.58■□□□□ 0.4
DFFB-204ENST00000378206 SOS2Q07890 1332 aaPredicted RBP17.58■□□□□ 0.4
DFFB-204ENST00000378206 TACC3Q9Y6A5 838 aa17.57■□□□□ 0.4
DFFB-204ENST00000378206 ANKRD18BA2A2Z9 1011 aa17.57■□□□□ 0.4
DFFB-204ENST00000378206 PRKAB2O43741 272 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms