RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 SLU7O95391 586 aaKnown RBP20.95■□□□□ 0.95
GNE-201ENST00000377902 SNRPA1P09661 255 aaKnown RBP20.95■□□□□ 0.95
GNE-201ENST00000377902 OSBP2Q969R2 916 aa20.95■□□□□ 0.95
GNE-201ENST00000377902 ZNF274Q96GC6 653 aaPredicted RBP20.95■□□□□ 0.95
GNE-201ENST00000377902 OSBPL5Q9H0X9 879 aaPredicted RBP20.95■□□□□ 0.94
GNE-201ENST00000377902 RGPD5Q99666 1765 aa20.95■□□□□ 0.94
GNE-201ENST00000377902 KIF28PB7ZC32 967 aa20.94■□□□□ 0.94
GNE-201ENST00000377902 LMOD1P29536 600 aaPredicted RBP20.94■□□□□ 0.94
GNE-201ENST00000377902 FKBP4Q02790 459 aaKnown RBP eCLIP20.94■□□□□ 0.94
GNE-201ENST00000377902 TTC5Q8N0Z6 440 aa20.94■□□□□ 0.94
GNE-201ENST00000377902 ATL3Q6DD88 541 aa20.94■□□□□ 0.94
GNE-201ENST00000377902 PUS3Q9BZE2 481 aaKnown RBP20.94■□□□□ 0.94
GNE-201ENST00000377902 AFDNP55196 1824 aaKnown RBP20.94■□□□□ 0.94
GNE-201ENST00000377902 IFIT1P09914 478 aaKnown RBP20.93■□□□□ 0.94
GNE-201ENST00000377902 ATP1A3P13637 1013 aa20.93■□□□□ 0.94
GNE-201ENST00000377902 GSDMDP57764 484 aa20.93■□□□□ 0.94
GNE-201ENST00000377902 ZRSR1Q15695 479 aaKnown RBP20.93■□□□□ 0.94
GNE-201ENST00000377902 KRT222Q8N1A0 295 aa20.93■□□□□ 0.94
GNE-201ENST00000377902 C8orf76Q96K31 380 aa20.93■□□□□ 0.94
GNE-201ENST00000377902 FOXP2O15409 715 aa20.93■□□□□ 0.94
GNE-201ENST00000377902 ZNF202O95125 648 aa20.93■□□□□ 0.94
GNE-201ENST00000377902 MARCKSP29966 332 aaPredicted RBP20.93■□□□□ 0.94
GNE-201ENST00000377902 SPTLC2O15270 562 aa20.92■□□□□ 0.94
GNE-201ENST00000377902 RNF113AO15541 343 aaKnown RBP20.92■□□□□ 0.94
GNE-201ENST00000377902 GOLGA8FQ08AF8 430 aa20.92■□□□□ 0.94
GNE-201ENST00000377902 GOLGA8DPQ0D2H9 430 aa20.92■□□□□ 0.94
GNE-201ENST00000377902 NCAPHQ15003 741 aa20.92■□□□□ 0.94
GNE-201ENST00000377902 GORABQ5T7V8 394 aa20.92■□□□□ 0.94
GNE-201ENST00000377902 PHRF1Q9P1Y6 1649 aaKnown RBP20.92■□□□□ 0.94
GNE-201ENST00000377902 SLC3A2P08195 630 aaKnown RBP20.92■□□□□ 0.94
GNE-201ENST00000377902 A0A1B0GUL7 405 aa20.92■□□□□ 0.94
GNE-201ENST00000377902 GABPB1Q06547 395 aaPredicted RBP20.92■□□□□ 0.94
GNE-201ENST00000377902 TERF2Q15554 542 aa20.92■□□□□ 0.94
GNE-201ENST00000377902 TTLL7Q6ZT98 887 aa20.92■□□□□ 0.94
GNE-201ENST00000377902 AIFM3Q96NN9 605 aa20.92■□□□□ 0.94
GNE-201ENST00000377902 DENND2AQ9ULE3 1009 aa20.92■□□□□ 0.94
GNE-201ENST00000377902 HPS5Q9UPZ3 1129 aa20.92■□□□□ 0.94
GNE-201ENST00000377902 KLF18A0A0U1RQI7 1052 aa20.91■□□□□ 0.94
GNE-201ENST00000377902 A0A1W2PQ27 194 aa20.91■□□□□ 0.94
GNE-201ENST00000377902 A0A1W2PQ64 194 aa20.91■□□□□ 0.94
GNE-201ENST00000377902 A0A1W2PQD8 194 aa20.91■□□□□ 0.94
GNE-201ENST00000377902 SFPQP23246 707 aaKnown RBP eCLIP20.91■□□□□ 0.94
GNE-201ENST00000377902 ORC3Q9UBD5 711 aaPredicted RBP20.91■□□□□ 0.94
GNE-201ENST00000377902 ABCC6O95255 1503 aa20.91■□□□□ 0.94
GNE-201ENST00000377902 WDHD1O75717 1129 aaPredicted RBP20.91■□□□□ 0.94
GNE-201ENST00000377902 MYSM1Q5VVJ2 828 aa20.91■□□□□ 0.94
GNE-201ENST00000377902 NKX2-3Q8TAU0 364 aa20.91■□□□□ 0.94
GNE-201ENST00000377902 IMPACTQ9P2X3 320 aa20.91■□□□□ 0.94
GNE-201ENST00000377902 MROH7-TTC4A0A0A0MT08 1334 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 GOLGA8BA8MQT2 603 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 CYP27B1O15528 508 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 WASHC4Q2M389 1173 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 FBXO18Q8NFZ0 1043 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 DPF2Q92785 391 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 KCND1Q9NSA2 647 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 NBPF26B4DH59 902 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 PFKFB1P16118 471 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 NBPF14Q5TI25 921 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 NBPF10Q6P3W6 841 aaKnown RBP20.9■□□□□ 0.94
GNE-201ENST00000377902 KRT28Q7Z3Y7 464 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 NBPF15Q8N660 670 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 PLBD2Q8NHP8 589 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 CCDC85AQ96PX6 553 aaPredicted RBP20.9■□□□□ 0.94
GNE-201ENST00000377902 HSD3B7Q9H2F3 369 aa20.9■□□□□ 0.94
GNE-201ENST00000377902 H7C1W4 665 aa20.89■□□□□ 0.93
GNE-201ENST00000377902 PRC1O43663 620 aa20.89■□□□□ 0.93
GNE-201ENST00000377902 TATP17735 454 aaPredicted RBP20.89■□□□□ 0.93
GNE-201ENST00000377902 AXDND1Q5T1B0 1012 aaPredicted RBP20.89■□□□□ 0.93
GNE-201ENST00000377902 FAM53CQ9NYF3 392 aa20.89■□□□□ 0.93
GNE-201ENST00000377902 FGAP02671 866 aa20.89■□□□□ 0.93
GNE-201ENST00000377902 ADORA1P30542 326 aa20.89■□□□□ 0.93
GNE-201ENST00000377902 KCNG4Q8TDN1 519 aa20.89■□□□□ 0.93
GNE-201ENST00000377902 POLR3EQ9NVU0 708 aa20.89■□□□□ 0.93
GNE-201ENST00000377902 MEGF6O75095 1541 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 ADAMTS7Q9UKP4 1686 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 RXRAP19793 462 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 ANTXR2P58335 489 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 NLRP12P59046 1061 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 PI16Q6UXB8 463 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 DDX17Q92841 729 aaKnown RBP20.88■□□□□ 0.93
GNE-201ENST00000377902 L2HGDHQ9H9P8 463 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 FANCGO15287 622 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 FANCCQ00597 558 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 SCARF1Q14162 830 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 CCDC93Q567U6 631 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 HOMER1Q86YM7 354 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 IFNL2Q8IZJ0 200 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 ZBTB3Q9H5J0 574 aa20.88■□□□□ 0.93
GNE-201ENST00000377902 SLIT3O75094 1523 aa20.87■□□□□ 0.93
GNE-201ENST00000377902 SYNE3Q6ZMZ3 975 aa20.87■□□□□ 0.93
GNE-201ENST00000377902 CCDC150Q8NCX0 1101 aa20.87■□□□□ 0.93
GNE-201ENST00000377902 DNAI1Q9UI46 699 aa20.87■□□□□ 0.93
GNE-201ENST00000377902 ARFGEF2Q9Y6D5 1785 aa20.87■□□□□ 0.93
GNE-201ENST00000377902 HSP90AA4PQ58FG1 418 aa20.87■□□□□ 0.93
GNE-201ENST00000377902 ANO1Q5XXA6 986 aa20.87■□□□□ 0.93
GNE-201ENST00000377902 BPIFA3Q9BQP9 254 aa20.87■□□□□ 0.93
GNE-201ENST00000377902 PUS7LQ9H0K6 701 aaKnown RBP20.87■□□□□ 0.93
GNE-201ENST00000377902 ERICH4A6NGS2 130 aa20.86■□□□□ 0.93
GNE-201ENST00000377902 EYA2O00167 538 aa20.86■□□□□ 0.93
GNE-201ENST00000377902 CPLX1O14810 134 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms