RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 TSGA10Q9BZW7 698 aa10□□□□□ -0.81
PCDH9-202ENST00000377865 DDX21Q9NR30 783 aaKnown RBP eCLIP10□□□□□ -0.81
PCDH9-202ENST00000377865 ZNF569Q5MCW4 686 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 DSCC1Q9BVC3 393 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 RAB34Q9BZG1 259 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 LRRC27Q9C0I9 530 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 ZNF287Q9HBT7 754 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 LRRC7Q96NW7 1537 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 MLH3Q9UHC1 1453 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 KRT86O43790 486 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 CWF19L2Q2TBE0 894 aaKnown RBP9.99□□□□□ -0.81
PCDH9-202ENST00000377865 ADALQ6DHV7 355 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 COPS6Q7L5N1 327 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 CCDC43Q96MW1 224 aaKnown RBP9.99□□□□□ -0.81
PCDH9-202ENST00000377865 JADE2Q9NQC1 790 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 SPTLC3Q9NUV7 552 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 EFCAB8A8MWE9 144 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 KIF5BP33176 963 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 BRD3Q15059 726 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 KIF2CQ99661 725 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 TPCN1Q9ULQ1 816 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 CHMP4BP1P59074 171 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 VPS36Q86VN1 386 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 MLKLQ8NB16 471 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 CARD6Q9BX69 1037 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 YEATS2Q9ULM3 1422 aa9.99□□□□□ -0.81
PCDH9-202ENST00000377865 CCDC194A0A1B0GVG4 234 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 A6NNZ2 444 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 PFKFB2O60825 505 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 NR1I2O75469 434 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 DDIT3P35638 169 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 KARSQ15046 597 aaKnown RBP9.98□□□□□ -0.81
PCDH9-202ENST00000377865 TUBB8Q3ZCM7 444 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 TTC6Q86TZ1 520 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 CCDC144CPQ8IYA2 1237 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 IP6K1Q92551 441 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 NAPGQ99747 312 aaPredicted RBP9.98□□□□□ -0.81
PCDH9-202ENST00000377865 IFI16Q16666 785 aaKnown RBP9.98□□□□□ -0.81
PCDH9-202ENST00000377865 TMEM266Q2M3C6 531 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 USP44Q9H0E7 712 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 MTMR7Q9Y216 660 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 ABCC3O15438 1527 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 ATP5J2-PTCD1G3V325 749 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 PTCD1O75127 700 aaKnown RBP9.98□□□□□ -0.81
PCDH9-202ENST00000377865 TACC1O75410 805 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 ZNF202O95125 648 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 GNAT2P19087 354 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 PTH1RQ03431 593 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 RNF187Q5TA31 235 aaPredicted RBP9.98□□□□□ -0.81
PCDH9-202ENST00000377865 TSC1Q92574 1164 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 CHD1O14646 1710 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 MINDY4BA8MYZ0 360 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 RAD21O60216 631 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 OAS2P29728 719 aaKnown RBP9.98□□□□□ -0.81
PCDH9-202ENST00000377865 LMBR1LQ6UX01 489 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 ZNF274Q96GC6 653 aaPredicted RBP9.98□□□□□ -0.81
PCDH9-202ENST00000377865 TRIM47Q96LD4 638 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 MKRN1Q9UHC7 482 aaKnown RBP9.98□□□□□ -0.81
PCDH9-202ENST00000377865 LMTK2Q8IWU2 1503 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 USP32Q8NFA0 1604 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 TRIM75PA6NK02 468 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 ATP5JP18859 108 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 MAPK8IP2Q13387 824 aaPredicted RBP9.98□□□□□ -0.81
PCDH9-202ENST00000377865 FAM173BQ6P4H8 233 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 RAB11FIP4Q86YS3 637 aa9.98□□□□□ -0.81
PCDH9-202ENST00000377865 NEURL4Q96JN8 1562 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 CALM1P0DP23 149 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 CALM2P0DP24 149 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 CALM3P0DP25 149 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 AFAP1L1Q8TED9 768 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 SEC63Q9UGP8 760 aaKnown RBP9.97□□□□□ -0.81
PCDH9-202ENST00000377865 RBM6P78332 1123 aaKnown RBP9.97□□□□□ -0.81
PCDH9-202ENST00000377865 CALML4Q96GE6 196 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 TMEM87BQ96K49 555 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 METTL22Q9BUU2 404 aaPredicted RBP9.97□□□□□ -0.81
PCDH9-202ENST00000377865 TCP11L1Q9NUJ3 509 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 TMOD3Q9NYL9 352 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 PUF60Q9UHX1 559 aaKnown RBP9.97□□□□□ -0.81
PCDH9-202ENST00000377865 NSFL1CQ9UNZ2 370 aaKnown RBP9.97□□□□□ -0.81
PCDH9-202ENST00000377865 PHLPP2Q6ZVD8 1323 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 EBAG9O00559 213 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 KRT2P35908 639 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 LRMPQ12912 555 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 CYP26C1Q6V0L0 522 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 KBTBD3Q8NAB2 608 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 FAM76AQ8TAV0 307 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 XPO4Q9C0E2 1151 aaKnown RBP9.97□□□□□ -0.81
PCDH9-202ENST00000377865 LZTFL1Q9NQ48 299 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 KIAA1468Q9P260 1216 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 GCOM1H8Y6P7 765 aaPredicted RBP9.97□□□□□ -0.81
PCDH9-202ENST00000377865 MYZAPP0CAP1 466 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 CAVIN4Q5BKX8 364 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 RILPL1Q5EBL4 403 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 SNRKQ9NRH2 765 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 EXOC1Q9NV70 894 aa9.97□□□□□ -0.81
PCDH9-202ENST00000377865 ZNF215Q9UL58 517 aaPredicted RBP9.97□□□□□ -0.81
PCDH9-202ENST00000377865 PNPLA6Q8IY17 1366 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 GOLGA6L10A0A0M3HER8 536 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 A0A1W2PQ27 194 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms