RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CWC27Q6UX04 472 aaKnown RBP5.61□□□□□ -1.51
PCDH9-201ENST00000377861 SYCE1Q8N0S2 351 aa5.61□□□□□ -1.51
PCDH9-201ENST00000377861 MBD5Q9P267 1494 aa5.61□□□□□ -1.51
PCDH9-201ENST00000377861 CAPN15O75808 1086 aa5.61□□□□□ -1.51
PCDH9-201ENST00000377861 LRRFIP2Q9Y608 721 aaKnown RBP5.61□□□□□ -1.51
PCDH9-201ENST00000377861 SART1O43290 800 aaKnown RBP5.61□□□□□ -1.51
PCDH9-201ENST00000377861 THAP12O43422 761 aa5.61□□□□□ -1.51
PCDH9-201ENST00000377861 SLC4A3P48751 1232 aa5.61□□□□□ -1.51
PCDH9-201ENST00000377861 ST5P78524 1137 aa5.61□□□□□ -1.51
PCDH9-201ENST00000377861 TNIP1Q15025 636 aa5.61□□□□□ -1.51
PCDH9-201ENST00000377861 AIDAQ96BJ3 306 aa5.61□□□□□ -1.51
PCDH9-201ENST00000377861 IFT20Q8IY31 132 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 KBTBD3Q8NAB2 608 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 STRN4Q9NRL3 753 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 SYCE3A1L190 88 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 PRPF6O94906 941 aaKnown RBP5.6□□□□□ -1.51
PCDH9-201ENST00000377861 KIAA1524Q8TCG1 905 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 FAM69CQ0P6D2 419 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 ERBB3P21860 1342 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 PI4KAP2A4QPH2 592 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 TACC1O75410 805 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 ODF2Q5BJF6 829 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 PI4KAP1Q8N8J0 262 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 PLBD2Q8NHP8 589 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.6□□□□□ -1.51
PCDH9-201ENST00000377861 NPHP1O15259 732 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 TCP1P17987 556 aaKnown RBP5.6□□□□□ -1.51
PCDH9-201ENST00000377861 LMNB1P20700 586 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 MNAT1P51948 309 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 RRS1Q15050 365 aaKnown RBP5.6□□□□□ -1.51
PCDH9-201ENST00000377861 PSD3Q9NYI0 1048 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 ADGRF5Q8IZF2 1346 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 EPS15P42566 896 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 CALML4Q96GE6 196 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 USP42Q9H9J4 1324 aaKnown RBP5.6□□□□□ -1.51
PCDH9-201ENST00000377861 KIRREL3Q8IZU9 778 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 PSMD2Q13200 908 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 MFSD6Q6ZSS7 791 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 SREK1Q8WXA9 508 aaKnown RBP5.6□□□□□ -1.51
PCDH9-201ENST00000377861 HNRNPCL1O60812 293 aaKnown RBP5.6□□□□□ -1.51
PCDH9-201ENST00000377861 CACNA2D4Q7Z3S7 1137 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 NEUROD6Q96NK8 337 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 ARHGEF5Q12774 1597 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 RPS6KB1P23443 525 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 DACT1Q9NYF0 836 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 PHLPP2Q6ZVD8 1323 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 NYXQ9GZU5 481 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 MTUS1Q9ULD2 1270 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 FAM184BQ9ULE4 1060 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 GABPB2Q8TAK5 448 aaPredicted RBP5.6□□□□□ -1.51
PCDH9-201ENST00000377861 TYRO3Q06418 890 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 MORC4Q8TE76 937 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 CCDC9Q9Y3X0 531 aaKnown RBP5.6□□□□□ -1.51
PCDH9-201ENST00000377861 TBC1D5Q92609 795 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 ZNF592Q92610 1267 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 COL17A1Q9UMD9 1497 aaPredicted RBP5.6□□□□□ -1.51
PCDH9-201ENST00000377861 H0YCG3 227 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 FBXO18Q8NFZ0 1043 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 TDRD7Q8NHU6 1098 aaKnown RBP5.6□□□□□ -1.51
PCDH9-201ENST00000377861 EMILIN1Q9Y6C2 1016 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 TMCO5BA8MYB1 307 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 SLC39A14Q15043 492 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 CLSTN2Q9H4D0 955 aa5.6□□□□□ -1.51
PCDH9-201ENST00000377861 OSBPL5Q9H0X9 879 aaPredicted RBP5.59□□□□□ -1.51
PCDH9-201ENST00000377861 PRLRP16471 622 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 PRIM1P49642 420 aaKnown RBP5.59□□□□□ -1.51
PCDH9-201ENST00000377861 DNM2P50570 870 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 TEKT1Q969V4 418 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 IFT122Q9HBG6 1241 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 DEXIO95424 95 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 PCSK2P16519 638 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 OR8K1Q8NGG5 319 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 USP16Q9Y5T5 823 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 MLH3Q9UHC1 1453 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 RNF113AO15541 343 aaKnown RBP5.59□□□□□ -1.51
PCDH9-201ENST00000377861 CCDC110Q8TBZ0 833 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 CSRNP2Q9H175 543 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 MAN1A1P33908 653 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 TTC39AQ5SRH9 613 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 METTL14Q9HCE5 456 aaKnown RBP5.59□□□□□ -1.51
PCDH9-201ENST00000377861 RIC8AQ9NPQ8 531 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 ORC3Q9UBD5 711 aaPredicted RBP5.59□□□□□ -1.51
PCDH9-201ENST00000377861 EIF4G3O43432 1585 aaKnown RBP5.59□□□□□ -1.51
PCDH9-201ENST00000377861 GJB2P29033 226 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 IGHMBP2P38935 993 aaKnown RBP5.59□□□□□ -1.51
PCDH9-201ENST00000377861 SLC20A2Q08357 652 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 WWC2Q6AWC2 1192 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 BRPF3Q9ULD4 1205 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 UBE3CQ15386 1083 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 KCNB2Q92953 911 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 ENOX1Q8TC92 643 aaKnown RBP5.59□□□□□ -1.51
PCDH9-201ENST00000377861 MYOM2P54296 1465 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 ATP5HO75947 161 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 SPRYD3Q8NCJ5 442 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 DHTKD1Q96HY7 919 aaPredicted RBP5.59□□□□□ -1.51
PCDH9-201ENST00000377861 KIAA0753Q2KHM9 967 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 HOOK2Q96ED9 719 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 GGA2Q9UJY4 613 aa5.59□□□□□ -1.51
PCDH9-201ENST00000377861 ANGEL1Q9UNK9 670 aaKnown RBP5.59□□□□□ -1.51
PCDH9-201ENST00000377861 PHF8Q9UPP1 1060 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms