RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 NHSQ6T4R5 1651 aa7.39□□□□□ -1.23
SSX1-201ENST00000376919 COL3A1P02461 1466 aaPredicted RBP7.39□□□□□ -1.23
SSX1-201ENST00000376919 IGSF1Q8N6C5 1336 aa7.39□□□□□ -1.23
SSX1-201ENST00000376919 FAM13AO94988 1023 aa7.39□□□□□ -1.23
SSX1-201ENST00000376919 NCLP19338 710 aaKnown RBP7.39□□□□□ -1.23
SSX1-201ENST00000376919 USP4Q13107 963 aa7.39□□□□□ -1.23
SSX1-201ENST00000376919 C1orf141Q5JVX7 400 aa7.39□□□□□ -1.23
SSX1-201ENST00000376919 FAM196AQ6ZSG2 479 aa7.39□□□□□ -1.23
SSX1-201ENST00000376919 ZCRB1Q8TBF4 217 aaKnown RBP7.39□□□□□ -1.23
SSX1-201ENST00000376919 KCTD15Q96SI1 283 aaPredicted RBP7.39□□□□□ -1.23
SSX1-201ENST00000376919 SBF2Q86WG5 1849 aa7.38□□□□□ -1.23
SSX1-201ENST00000376919 MAPK8IP3Q9UPT6 1336 aa7.38□□□□□ -1.23
SSX1-201ENST00000376919 NPR3P17342 541 aa7.38□□□□□ -1.23
SSX1-201ENST00000376919 IL13P35225 146 aa7.38□□□□□ -1.23
SSX1-201ENST00000376919 MMRN1Q13201 1228 aa7.38□□□□□ -1.23
SSX1-201ENST00000376919 PLEKHO1Q53GL0 409 aaPredicted RBP7.38□□□□□ -1.23
SSX1-201ENST00000376919 IFFO2Q5TF58 517 aa7.38□□□□□ -1.23
SSX1-201ENST00000376919 LIAT1Q6ZQX7 453 aa7.38□□□□□ -1.23
SSX1-201ENST00000376919 TMC7Q7Z402 723 aa7.38□□□□□ -1.23
SSX1-201ENST00000376919 EHBP1Q8NDI1 1231 aa7.38□□□□□ -1.23
SSX1-201ENST00000376919 PIK3R5Q8WYR1 880 aa7.38□□□□□ -1.23
SSX1-201ENST00000376919 PRKRIP1Q9H875 184 aaPredicted RBP7.38□□□□□ -1.23
SSX1-201ENST00000376919 VIRMAQ69YN4 1812 aaKnown RBP7.38□□□□□ -1.23
SSX1-201ENST00000376919 KAT6BQ8WYB5 2073 aa7.37□□□□□ -1.23
SSX1-201ENST00000376919 NCAPD2Q15021 1401 aa7.37□□□□□ -1.23
SSX1-201ENST00000376919 NDUFB5O43674 189 aa7.37□□□□□ -1.23
SSX1-201ENST00000376919 LGR5O75473 907 aa7.37□□□□□ -1.23
SSX1-201ENST00000376919 TRIM37O94972 964 aa7.37□□□□□ -1.23
SSX1-201ENST00000376919 BAG6P46379 1132 aa7.37□□□□□ -1.23
SSX1-201ENST00000376919 FMR1Q06787 632 aaKnown RBP eCLIP7.37□□□□□ -1.23
SSX1-201ENST00000376919 AMOTQ4VCS5 1084 aa7.37□□□□□ -1.23
SSX1-201ENST00000376919 RC3H1Q5TC82 1133 aaKnown RBP7.37□□□□□ -1.23
SSX1-201ENST00000376919 ZNF530Q6P9A1 599 aaPredicted RBP7.37□□□□□ -1.23
SSX1-201ENST00000376919 VASH1Q7L8A9 365 aaPredicted RBP7.37□□□□□ -1.23
SSX1-201ENST00000376919 TSEN2Q8NCE0 465 aaKnown RBP7.37□□□□□ -1.23
SSX1-201ENST00000376919 EMID1Q96A84 441 aaPredicted RBP7.37□□□□□ -1.23
SSX1-201ENST00000376919 ACSBG1Q96GR2 724 aa7.37□□□□□ -1.23
SSX1-201ENST00000376919 CDK15Q96Q40 435 aa7.37□□□□□ -1.23
SSX1-201ENST00000376919 PNNQ9H307 717 aaKnown RBP7.37□□□□□ -1.23
SSX1-201ENST00000376919 PCDHB11Q9Y5F2 797 aa7.37□□□□□ -1.23
SSX1-201ENST00000376919 BTAF1O14981 1849 aa7.36□□□□□ -1.23
SSX1-201ENST00000376919 TOGARAM1Q9Y4F4 1720 aa7.36□□□□□ -1.23
SSX1-201ENST00000376919 TREHO43280 583 aa7.36□□□□□ -1.23
SSX1-201ENST00000376919 PRKAR2BP31323 418 aa7.36□□□□□ -1.23
SSX1-201ENST00000376919 INTS6LQ5JSJ4 861 aaKnown RBP7.36□□□□□ -1.23
SSX1-201ENST00000376919 CAPN12Q6ZSI9 719 aa7.36□□□□□ -1.23
SSX1-201ENST00000376919 IFNL2Q8IZJ0 200 aa7.36□□□□□ -1.23
SSX1-201ENST00000376919 MPNDQ8N594 471 aa7.36□□□□□ -1.23
SSX1-201ENST00000376919 MARCH10Q8NA82 808 aaPredicted RBP7.36□□□□□ -1.23
SSX1-201ENST00000376919 MRS2Q9HD23 443 aa7.36□□□□□ -1.23
SSX1-201ENST00000376919 ITGB4P16144 1822 aa7.36□□□□□ -1.23
SSX1-201ENST00000376919 KDRP35968 1356 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 PLEKHG2Q9H7P9 1386 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 APBA3O96018 575 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 HSP90AB1P08238 724 aaKnown RBP7.35□□□□□ -1.23
SSX1-201ENST00000376919 IGFBP4P22692 258 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 C9orf131Q5VYM1 1079 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 TMEM87AQ8NBN3 555 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 GAS2L2Q8NHY3 880 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 PURBQ96QR8 312 aaKnown RBP7.35□□□□□ -1.23
SSX1-201ENST00000376919 CITED4Q96RK1 184 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 TANGO6Q9C0B7 1094 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 METTL5Q9NRN9 209 aaKnown RBP7.35□□□□□ -1.23
SSX1-201ENST00000376919 EP400Q96L91 3159 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 RGPD3A6NKT7 1758 aaPredicted RBP7.35□□□□□ -1.23
SSX1-201ENST00000376919 RGPD4Q7Z3J3 1758 aa7.35□□□□□ -1.23
SSX1-201ENST00000376919 SCN11AQ9UI33 1791 aa7.34□□□□□ -1.23
SSX1-201ENST00000376919 ERVH48-1M5A8F1 160 aa7.34□□□□□ -1.23
SSX1-201ENST00000376919 PRPF40AO75400 957 aaKnown RBP7.34□□□□□ -1.23
SSX1-201ENST00000376919 PHKG2P15735 406 aa7.34□□□□□ -1.23
SSX1-201ENST00000376919 SLC19A1P41440 591 aa7.34□□□□□ -1.23
SSX1-201ENST00000376919 RAB15P59190 212 aa7.34□□□□□ -1.23
SSX1-201ENST00000376919 NAA30Q147X3 362 aaPredicted RBP7.34□□□□□ -1.23
SSX1-201ENST00000376919 DIEXFQ68CQ4 756 aaKnown RBP7.34□□□□□ -1.23
SSX1-201ENST00000376919 DPH6Q7L8W6 267 aa7.34□□□□□ -1.23
SSX1-201ENST00000376919 NT5DC4Q86YG4 428 aa7.34□□□□□ -1.23
SSX1-201ENST00000376919 RTF1Q92541 710 aaKnown RBP7.34□□□□□ -1.23
SSX1-201ENST00000376919 BRPF3Q9ULD4 1205 aa7.34□□□□□ -1.23
SSX1-201ENST00000376919 DLG5Q8TDM6 1919 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 SIAH2O43255 324 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 LDHBP07195 334 aaKnown RBP7.33□□□□□ -1.24
SSX1-201ENST00000376919 MPSTP25325 297 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 GRM5P41594 1212 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 ARID5BQ14865 1188 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 LDLRAD1Q5T700 205 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 MPRIPQ6WCQ1 1025 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 TMC4Q7Z404 712 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 ANKRD13AQ8IZ07 590 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 DMRTB1Q96MA1 342 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 TINF2Q9BSI4 451 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 TGIF2Q9GZN2 237 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 TMOD3Q9NYL9 352 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 MAP3K5Q99683 1374 aa7.33□□□□□ -1.24
SSX1-201ENST00000376919 RREB1Q92766 1687 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 WNT7AO00755 349 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 CYP27B1O15528 508 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 SORBS3O60504 671 aa7.32□□□□□ -1.24
SSX1-201ENST00000376919 MYCP01106 439 aaPredicted RBP7.32□□□□□ -1.24
SSX1-201ENST00000376919 CABP4P57796 275 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 653.8 ms