RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 BEGAINQ9BUH8 593 aa12.53□□□□□ -0.4
MDC1-201ENST00000376406 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.53□□□□□ -0.4
MDC1-201ENST00000376406 CROCC2H7BZ55 1655 aa12.53□□□□□ -0.4
MDC1-201ENST00000376406 ISM2Q6H9L7 571 aa12.52□□□□□ -0.4
MDC1-201ENST00000376406 CABLES1Q8TDN4 633 aa12.52□□□□□ -0.4
MDC1-201ENST00000376406 GLT8D2Q9H1C3 349 aa12.52□□□□□ -0.4
MDC1-201ENST00000376406 EXOC1Q9NV70 894 aa12.52□□□□□ -0.4
MDC1-201ENST00000376406 MAGEB6P1A0A0J9YX57 407 aa12.52□□□□□ -0.4
MDC1-201ENST00000376406 UBA7P41226 1012 aa12.52□□□□□ -0.4
MDC1-201ENST00000376406 DACT1Q9NYF0 836 aa12.52□□□□□ -0.4
MDC1-201ENST00000376406 PRC1O43663 620 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 TFCP2Q12800 502 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 WDR66Q8TBY9 1149 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 LAMC1P11047 1609 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 PLBD2Q8NHP8 589 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 PKNOX2Q96KN3 472 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 PICK1Q9NRD5 415 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 TAX1BP1Q86VP1 789 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 FERMT2Q96AC1 680 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 NAA15Q9BXJ9 866 aaKnown RBP12.52□□□□□ -0.41
MDC1-201ENST00000376406 TYRO3Q06418 890 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 TTC6Q86TZ1 520 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 LUZP1Q86V48 1076 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 UBA5Q9GZZ9 404 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 ZKSCAN5Q9Y2L8 839 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 PRDM15P57071 1507 aaPredicted RBP12.52□□□□□ -0.41
MDC1-201ENST00000376406 MAP3K19Q56UN5 1328 aa12.52□□□□□ -0.41
MDC1-201ENST00000376406 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 NAP1L4Q99733 375 aaKnown RBP12.51□□□□□ -0.41
MDC1-201ENST00000376406 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 BRAPQ7Z569 592 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 CCDC172P0C7W6 258 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 CWF19L2Q2TBE0 894 aaKnown RBP12.51□□□□□ -0.41
MDC1-201ENST00000376406 FERMT1Q9BQL6 677 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 SH3TC1Q8TE82 1336 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 STAT6P42226 847 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 TDRD12Q587J7 1177 aaKnown RBP12.51□□□□□ -0.41
MDC1-201ENST00000376406 SLC9C2Q5TAH2 1124 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 DHX32Q7L7V1 743 aaKnown RBP12.51□□□□□ -0.41
MDC1-201ENST00000376406 TMX1Q9H3N1 280 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 STX8Q9UNK0 236 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 CDC42BPGQ6DT37 1551 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 PLEKHG3A1L390 1219 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 BRDTQ58F21 947 aaPredicted RBP12.51□□□□□ -0.41
MDC1-201ENST00000376406 TBC1D22AQ8WUA7 517 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 NSFL1CQ9UNZ2 370 aaKnown RBP12.51□□□□□ -0.41
MDC1-201ENST00000376406 MYOM2P54296 1465 aa12.51□□□□□ -0.41
MDC1-201ENST00000376406 ATP7BP35670 1465 aa12.5□□□□□ -0.41
MDC1-201ENST00000376406 SPTLC2O15270 562 aa12.5□□□□□ -0.41
MDC1-201ENST00000376406 CCDC40Q4G0X9 1142 aa12.5□□□□□ -0.41
MDC1-201ENST00000376406 AOPEPQ8N6M6 819 aa12.5□□□□□ -0.41
MDC1-201ENST00000376406 PDE8AO60658 829 aa12.5□□□□□ -0.41
MDC1-201ENST00000376406 TCEANC2Q96MN5 208 aa12.5□□□□□ -0.41
MDC1-201ENST00000376406 PANK2Q9BZ23 570 aa12.5□□□□□ -0.41
MDC1-201ENST00000376406 DNAJC25Q9H1X3 360 aa12.5□□□□□ -0.41
MDC1-201ENST00000376406 IQGAP3Q86VI3 1631 aa12.5□□□□□ -0.41
MDC1-201ENST00000376406 SKILP12757 684 aa12.5□□□□□ -0.41
MDC1-201ENST00000376406 SSR1P43307 286 aaKnown RBP12.49□□□□□ -0.41
MDC1-201ENST00000376406 BMS1Q14692 1282 aaKnown RBP12.49□□□□□ -0.41
MDC1-201ENST00000376406 RPS6KB1P23443 525 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 ARHGEF10LQ9HCE6 1279 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 GGA1Q9UJY5 639 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 SAMM50Q9Y512 469 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 KIAA0232Q92628 1395 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 KRT2P35908 639 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 RRAGBQ5VZM2 374 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 TRIM47Q96LD4 638 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 ZNF830Q96NB3 372 aaPredicted RBP12.49□□□□□ -0.41
MDC1-201ENST00000376406 SPDYE3A6NKU9 549 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 CHL1O00533 1208 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 N4BP3O15049 544 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 PPFIA3O75145 1194 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 C6orf50Q9HD87 102 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 CKAP4Q07065 602 aaKnown RBP12.49□□□□□ -0.41
MDC1-201ENST00000376406 APOBRQ0VD83 1088 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 IFI16Q16666 785 aaKnown RBP12.49□□□□□ -0.41
MDC1-201ENST00000376406 SLC52A2Q9HAB3 445 aa12.49□□□□□ -0.41
MDC1-201ENST00000376406 GNG11P61952 73 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 PUM3Q15397 648 aaKnown RBP12.48□□□□□ -0.41
MDC1-201ENST00000376406 TMOD4Q9NZQ9 345 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 SPAG1Q07617 926 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 FAM196AQ6ZSG2 479 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 PTPDC1A2A3K4 754 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 RBM28Q9NW13 759 aaKnown RBP12.48□□□□□ -0.41
MDC1-201ENST00000376406 ANKRD62A6NC57 917 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 GCOM1H8Y6P7 765 aaPredicted RBP12.48□□□□□ -0.41
MDC1-201ENST00000376406 MYZAPP0CAP1 466 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
MDC1-201ENST00000376406 LRRC45Q96CN5 670 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 GNA11P29992 359 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 VAT1LQ9HCJ6 419 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 SBNO2Q9Y2G9 1366 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 APBA3O96018 575 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 CCDC186Q7Z3E2 898 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 VEZTQ9HBM0 779 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 CALCOCO1Q9P1Z2 691 aa12.48□□□□□ -0.41
MDC1-201ENST00000376406 AFMP43652 599 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms