RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 FOXO4P98177 505 aa17.78■□□□□ 0.44
MSH5-203ENST00000375750 RABL6Q3YEC7 729 aaPredicted RBP17.78■□□□□ 0.44
MSH5-203ENST00000375750 CCDC191Q8NCU4 936 aa17.78■□□□□ 0.44
MSH5-203ENST00000375750 CCDC112Q8NEF3 446 aa17.78■□□□□ 0.44
MSH5-203ENST00000375750 TAOK2Q9UL54 1235 aa17.78■□□□□ 0.44
MSH5-203ENST00000375750 TCIRG1Q13488 830 aa17.78■□□□□ 0.44
MSH5-203ENST00000375750 SNW1Q13573 536 aaKnown RBP17.78■□□□□ 0.44
MSH5-203ENST00000375750 HLFQ16534 295 aa17.78■□□□□ 0.44
MSH5-203ENST00000375750 UTP14CQ5TAP6 766 aaKnown RBP17.78■□□□□ 0.44
MSH5-203ENST00000375750 CEP135Q66GS9 1140 aa17.78■□□□□ 0.44
MSH5-203ENST00000375750 KIF6Q6ZMV9 814 aa17.78■□□□□ 0.44
MSH5-203ENST00000375750 NSUN7Q8NE18 718 aaKnown RBP17.78■□□□□ 0.44
MSH5-203ENST00000375750 GPHNQ9NQX3 736 aaPredicted RBP17.78■□□□□ 0.44
MSH5-203ENST00000375750 LRP6O75581 1613 aa17.78■□□□□ 0.44
MSH5-203ENST00000375750 PTPDC1A2A3K4 754 aa17.77■□□□□ 0.44
MSH5-203ENST00000375750 NPHP1O15259 732 aa17.77■□□□□ 0.44
MSH5-203ENST00000375750 DOT1LQ8TEK3 1739 aa17.77■□□□□ 0.43
MSH5-203ENST00000375750 ATP5JP18859 108 aa17.77■□□□□ 0.43
MSH5-203ENST00000375750 DHX40Q8IX18 779 aaKnown RBP17.77■□□□□ 0.43
MSH5-203ENST00000375750 CTNNA3Q9UI47 895 aa17.77■□□□□ 0.43
MSH5-203ENST00000375750 SKILP12757 684 aa17.76■□□□□ 0.43
MSH5-203ENST00000375750 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.76■□□□□ 0.43
MSH5-203ENST00000375750 RAB11FIP4Q86YS3 637 aa17.76■□□□□ 0.43
MSH5-203ENST00000375750 ISCA1Q9BUE6 129 aa17.76■□□□□ 0.43
MSH5-203ENST00000375750 NUP188Q5SRE5 1749 aa17.76■□□□□ 0.43
MSH5-203ENST00000375750 VPS72Q15906 364 aa17.76■□□□□ 0.43
MSH5-203ENST00000375750 ILDR1Q86SU0 546 aaPredicted RBP17.76■□□□□ 0.43
MSH5-203ENST00000375750 AOPEPQ8N6M6 819 aa17.76■□□□□ 0.43
MSH5-203ENST00000375750 CERKQ8TCT0 537 aa17.76■□□□□ 0.43
MSH5-203ENST00000375750 COPRSQ9NQ92 184 aa17.76■□□□□ 0.43
MSH5-203ENST00000375750 NWD2Q9ULI1 1742 aa17.76■□□□□ 0.43
MSH5-203ENST00000375750 CCDC69A6NI79 296 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 ATP6V1AP38606 617 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 MCMDC2Q4G0Z9 681 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 AEBP2Q6ZN18 517 aaPredicted RBP17.75■□□□□ 0.43
MSH5-203ENST00000375750 NEUROD6Q96NK8 337 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 CFAP45Q9UL16 551 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 BECN2A8MW95 431 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 GOLIM4O00461 696 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 ME1P48163 572 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 KRT32Q14532 448 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 FSIP1Q8NA03 581 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 ZNF215Q9UL58 517 aaPredicted RBP17.75■□□□□ 0.43
MSH5-203ENST00000375750 TBC1D2BQ9UPU7 963 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 MAP3K15Q6ZN16 1313 aa17.75■□□□□ 0.43
MSH5-203ENST00000375750 GPTP24298 496 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 TIMM10P62072 90 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 TTLL5Q6EMB2 1281 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 FNBP4Q8N3X1 1017 aaPredicted RBP17.74■□□□□ 0.43
MSH5-203ENST00000375750 SMARCC2Q8TAQ2 1214 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 FAM89AQ96GI7 184 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 GJB4Q9NTQ9 266 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 USP21Q9UK80 565 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 A0A1B0GVL5 298 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 STX1AQ16623 288 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 RCOR1Q9UKL0 485 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
MSH5-203ENST00000375750 PFKFB2O60825 505 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 SYNE4Q8N205 404 aa17.74■□□□□ 0.43
MSH5-203ENST00000375750 ZSCAN16Q9H4T2 348 aaPredicted RBP17.74■□□□□ 0.43
MSH5-203ENST00000375750 LOC102724428A0A0B4J2F2 783 aa17.73■□□□□ 0.43
MSH5-203ENST00000375750 SIK1P57059 783 aa17.73■□□□□ 0.43
MSH5-203ENST00000375750 CCZ1BP86790 482 aa17.73■□□□□ 0.43
MSH5-203ENST00000375750 CCZ1P86791 482 aaPredicted RBP17.73■□□□□ 0.43
MSH5-203ENST00000375750 GIGYF2Q6Y7W6 1299 aaKnown RBP17.73■□□□□ 0.43
MSH5-203ENST00000375750 GTPBP4Q9BZE4 634 aaKnown RBP17.73■□□□□ 0.43
MSH5-203ENST00000375750 BIN1O00499 593 aa17.72■□□□□ 0.43
MSH5-203ENST00000375750 PDIA4P13667 645 aaKnown RBP17.72■□□□□ 0.43
MSH5-203ENST00000375750 ISM2Q6H9L7 571 aa17.72■□□□□ 0.43
MSH5-203ENST00000375750 CCDC73Q6ZRK6 1079 aa17.72■□□□□ 0.43
MSH5-203ENST00000375750 ENGASEQ8NFI3 743 aa17.72■□□□□ 0.43
MSH5-203ENST00000375750 CCDC85AQ96PX6 553 aaPredicted RBP17.72■□□□□ 0.43
MSH5-203ENST00000375750 KINO60870 393 aaKnown RBP17.72■□□□□ 0.43
MSH5-203ENST00000375750 HSPA1LP34931 641 aa17.72■□□□□ 0.43
MSH5-203ENST00000375750 ITPK1Q13572 414 aa17.72■□□□□ 0.43
MSH5-203ENST00000375750 PTPN14Q15678 1187 aa17.72■□□□□ 0.43
MSH5-203ENST00000375750 FAM182BQ5T319 152 aa17.72■□□□□ 0.43
MSH5-203ENST00000375750 DHX32Q7L7V1 743 aaKnown RBP17.72■□□□□ 0.43
MSH5-203ENST00000375750 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
MSH5-203ENST00000375750 ZNF594Q96JF6 807 aaPredicted RBP17.72■□□□□ 0.43
MSH5-203ENST00000375750 HAUS7Q99871 368 aa17.72■□□□□ 0.43
MSH5-203ENST00000375750 POLR3DP05423 398 aaPredicted RBP17.71■□□□□ 0.43
MSH5-203ENST00000375750 INTS5Q6P9B9 1019 aaKnown RBP17.71■□□□□ 0.43
MSH5-203ENST00000375750 PCDHA7Q9UN72 937 aa17.71■□□□□ 0.43
MSH5-203ENST00000375750 PAXBP1Q9Y5B6 917 aa17.71■□□□□ 0.43
MSH5-203ENST00000375750 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.71■□□□□ 0.43
MSH5-203ENST00000375750 CDC25BP30305 580 aa17.71■□□□□ 0.43
MSH5-203ENST00000375750 KMT5BQ4FZB7 885 aa17.71■□□□□ 0.43
MSH5-203ENST00000375750 DZIP3Q86Y13 1208 aaKnown RBP17.71■□□□□ 0.43
MSH5-203ENST00000375750 LRRN4CLQ8ND94 238 aa17.71■□□□□ 0.43
MSH5-203ENST00000375750 OGFRQ9NZT2 677 aa17.71■□□□□ 0.43
MSH5-203ENST00000375750 IL6STP40189 918 aaPredicted RBP17.7■□□□□ 0.42
MSH5-203ENST00000375750 CRKLP46109 303 aaKnown RBP17.7■□□□□ 0.42
MSH5-203ENST00000375750 TRIM28Q13263 835 aaKnown RBP17.7■□□□□ 0.42
MSH5-203ENST00000375750 SARM1Q6SZW1 724 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 NBPF11Q86T75 865 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 MRFAP1L1Q96HT8 127 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 E7EWF7 191 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 KCNQ4P56696 695 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms