RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 ANKS4BQ8N8V4 417 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 MAIP1Q8WWC4 291 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.21□□□□□ -1.58
SCN1A-202ENST00000375405 SUCLA2Q9P2R7 463 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-202ENST00000375405 TRAK1Q9UPV9 953 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 WASHC2CQ9Y4E1 1318 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 KRT87PA6NCN2 255 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 B4DLN1 442 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 EIF3CLB5ME19 914 aaKnown RBP5.21□□□□□ -1.58
SCN1A-202ENST00000375405 IDEP14735 1019 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 MRPL12P52815 198 aaKnown RBP5.21□□□□□ -1.58
SCN1A-202ENST00000375405 OGFOD1Q8N543 542 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 PRPF38AQ8NAV1 312 aaKnown RBP5.21□□□□□ -1.58
SCN1A-202ENST00000375405 C22orf23Q9BZE7 217 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 DDX41Q9UJV9 622 aaKnown RBP5.21□□□□□ -1.58
SCN1A-202ENST00000375405 ZHX1Q9UKY1 873 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-202ENST00000375405 F8W031 263 aaPredicted RBP5.21□□□□□ -1.58
SCN1A-202ENST00000375405 PPFIA4O75335 1185 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 NPM3O75607 178 aaKnown RBP5.21□□□□□ -1.58
SCN1A-202ENST00000375405 NEK4P51957 841 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 PRKCQQ04759 706 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 KRT77Q7Z794 578 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 NUDCD3Q8IVD9 361 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 MICALL1Q8N3F8 863 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 MPHOSPH9Q99550 1183 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 OSBPL10Q9BXB5 764 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 FAM204AQ9H8W3 233 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 ATP8A1Q9Y2Q0 1164 aa5.21□□□□□ -1.58
SCN1A-202ENST00000375405 CDKL5O76039 1030 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 MYSM1Q5VVJ2 828 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 ZSCAN25Q6NSZ9 544 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 NBPF10Q6P3W6 841 aaKnown RBP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 MIER3Q7Z3K6 550 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 EFCAB13Q8IY85 973 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 C1orf115Q9H7X2 142 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 RIMBP2O15034 1052 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 CETN3O15182 167 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 TEX28O15482 410 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 LUC7L3O95232 432 aaKnown RBP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 TCF3P15923 654 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 SLC12A2P55011 1212 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 NONOQ15233 471 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 ANGPTL8Q6UXH0 198 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 TAOK1Q7L7X3 1001 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 LEMD2Q8NC56 503 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 CDC26Q8NHZ8 85 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 OTULINQ96BN8 352 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 FAM193BQ96PV7 902 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 FAM8A1Q9UBU6 413 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 EEA1Q15075 1411 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 NDUFB5O43674 189 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 NR1I2O75469 434 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 COG7P83436 770 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 TRIM60Q495X7 471 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 MYLK4Q86YV6 388 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 FGD4Q96M96 766 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 ARHGAP35Q9NRY4 1499 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 HNRNPMP52272 730 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 ANGPT1Q15389 498 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 ESCO1Q5FWF5 840 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 NXNQ6DKJ4 435 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 CCDC186Q7Z3E2 898 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 TAGAPQ8N103 731 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 ALKBH8Q96BT7 664 aaKnown RBP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 TRIM11Q96F44 468 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 CALML4Q96GE6 196 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 NEK1Q96PY6 1258 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 ZBBXA8MT70 800 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 NVLO15381 856 aaKnown RBP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 MCM3P25205 808 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 GPR162Q16538 588 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 AHI1Q8N157 1196 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 DNAAF4Q8WXU2 420 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 OPTNQ96CV9 577 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 MMTAG2Q9BU76 263 aaKnown RBP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 BACH1O14867 736 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 NBNO60934 754 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 BRD1O95696 1058 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 APOEP02649 317 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 KRT5P13647 590 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 CAPZA2P47755 286 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 TTF1Q15361 905 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 PPP1R7Q15435 360 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 CLUL1Q15846 466 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 NAALADL2Q58DX5 795 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 E4F1Q66K89 784 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 JADE1Q6IE81 842 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 KRT80Q6KB66 452 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 CHMP1BQ7LBR1 199 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 SIX5Q8N196 739 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 MYD88Q99836 296 aa5.2□□□□□ -1.58
SCN1A-202ENST00000375405 ZNF277Q9NRM2 450 aaPredicted RBP5.2□□□□□ -1.58
SCN1A-202ENST00000375405 SETSIPP0DME0 302 aa5.19□□□□□ -1.58
SCN1A-202ENST00000375405 TTC22Q5TAA0 569 aa5.19□□□□□ -1.58
SCN1A-202ENST00000375405 BSPRYQ5W0U4 402 aa5.19□□□□□ -1.58
SCN1A-202ENST00000375405 KLHL24Q6TFL4 600 aa5.19□□□□□ -1.58
SCN1A-202ENST00000375405 FNBP4Q8N3X1 1017 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-202ENST00000375405 SMCR8Q8TEV9 937 aaPredicted RBP5.19□□□□□ -1.58
SCN1A-202ENST00000375405 DIS3LQ8TF46 1054 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms