RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 IQUBQ8NA54 791 aa24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 LMBR1Q8WVP7 490 aa24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 EDC4Q6P2E9 1401 aaKnown RBP24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 RILPL1Q5EBL4 403 aa24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 PPP1R2P41236 205 aa24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 HOOK3Q86VS8 718 aa24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 LUC7L2Q9Y383 392 aaKnown RBP24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 ZPR1O75312 459 aa24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 HSP90AA4PQ58FG1 418 aa24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 KLHL34Q8N239 644 aa24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 ERMNQ8TAM6 284 aa24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 ZRANB1Q9UGI0 708 aa24.05■■□□□ 1.44
TGFBR1-202ENST00000374994 CCDC152Q4G0S7 254 aa24.04■■□□□ 1.44
TGFBR1-202ENST00000374994 VPS18Q9P253 973 aa24.04■■□□□ 1.44
TGFBR1-202ENST00000374994 STMN4Q9H169 189 aaPredicted RBP24.04■■□□□ 1.44
TGFBR1-202ENST00000374994 GSTO1P78417 241 aa24.04■■□□□ 1.44
TGFBR1-202ENST00000374994 ANKIB1Q9P2G1 1089 aa24.04■■□□□ 1.44
TGFBR1-202ENST00000374994 DDX21Q9NR30 783 aaKnown RBP eCLIP24.04■■□□□ 1.44
TGFBR1-202ENST00000374994 RNF216Q9NWF9 866 aaPredicted RBP24.04■■□□□ 1.44
TGFBR1-202ENST00000374994 TTF2Q9UNY4 1162 aaKnown RBP24.04■■□□□ 1.44
TGFBR1-202ENST00000374994 KDM5DQ9BY66 1539 aa24.04■■□□□ 1.44
TGFBR1-202ENST00000374994 GTF2A1P52655 376 aaPredicted RBP24.03■■□□□ 1.44
TGFBR1-202ENST00000374994 PPP2R3AQ06190 1150 aa24.03■■□□□ 1.44
TGFBR1-202ENST00000374994 TFCP2Q12800 502 aa24.03■■□□□ 1.44
TGFBR1-202ENST00000374994 LZTFL1Q9NQ48 299 aa24.03■■□□□ 1.44
TGFBR1-202ENST00000374994 G2E3Q7L622 706 aa24.03■■□□□ 1.44
TGFBR1-202ENST00000374994 JARID2Q92833 1246 aaPredicted RBP24.03■■□□□ 1.44
TGFBR1-202ENST00000374994 TRPM2O94759 1503 aa24.03■■□□□ 1.44
TGFBR1-202ENST00000374994 A6NNZ2 444 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 KRT2P35908 639 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 TUBB8Q3ZCM7 444 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 A0A1B0GVL5 298 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 VAV2P52735 878 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 PRPF4BQ13523 1007 aaKnown RBP24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 CWF19L2Q2TBE0 894 aaKnown RBP24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 CYP7A1P22680 504 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 RASAL2Q9UJF2 1139 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 SBNO2Q9Y2G9 1366 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 KARSQ15046 597 aaKnown RBP24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 ANO1Q5XXA6 986 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 GCC2Q8IWJ2 1684 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 CPA1P15085 419 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 ASIC1P78348 528 aa24.02■■□□□ 1.44
TGFBR1-202ENST00000374994 TSGA10Q9BZW7 698 aa24.01■■□□□ 1.43
TGFBR1-202ENST00000374994 IBTKQ9P2D0 1353 aaPredicted RBP24.01■■□□□ 1.43
TGFBR1-202ENST00000374994 CNKSR2Q8WXI2 1034 aa24.01■■□□□ 1.43
TGFBR1-202ENST00000374994 ARHGAP6O43182 974 aa24.01■■□□□ 1.43
TGFBR1-202ENST00000374994 RASSF4Q9H2L5 321 aa24.01■■□□□ 1.43
TGFBR1-202ENST00000374994 GADD45BO75293 160 aaPredicted RBP24.01■■□□□ 1.43
TGFBR1-202ENST00000374994 TBCAO75347 108 aaKnown RBP24.01■■□□□ 1.43
TGFBR1-202ENST00000374994 UBXN1Q04323 297 aa24.01■■□□□ 1.43
TGFBR1-202ENST00000374994 CTNNBL1Q8WYA6 563 aaPredicted RBP24.01■■□□□ 1.43
TGFBR1-202ENST00000374994 GUCA1BQ9UMX6 200 aa24.01■■□□□ 1.43
TGFBR1-202ENST00000374994 TMEM87BQ96K49 555 aa24■■□□□ 1.43
TGFBR1-202ENST00000374994 MLKLQ8NB16 471 aa24■■□□□ 1.43
TGFBR1-202ENST00000374994 WDR7Q9Y4E6 1490 aa24■■□□□ 1.43
TGFBR1-202ENST00000374994 FANCCQ00597 558 aa24■■□□□ 1.43
TGFBR1-202ENST00000374994 ATRIPQ8WXE1 791 aa24■■□□□ 1.43
TGFBR1-202ENST00000374994 DNAI2Q9GZS0 605 aa24■■□□□ 1.43
TGFBR1-202ENST00000374994 TRAF1Q13077 416 aa23.99■■□□□ 1.43
TGFBR1-202ENST00000374994 FAM76AQ8TAV0 307 aa23.99■■□□□ 1.43
TGFBR1-202ENST00000374994 TBC1D5Q92609 795 aa23.99■■□□□ 1.43
TGFBR1-202ENST00000374994 BICC1Q9H694 974 aaKnown RBP23.99■■□□□ 1.43
TGFBR1-202ENST00000374994 PUF60Q9UHX1 559 aaKnown RBP23.99■■□□□ 1.43
TGFBR1-202ENST00000374994 CCDC129Q6ZRS4 1044 aa23.99■■□□□ 1.43
TGFBR1-202ENST00000374994 NF2P35240 595 aa23.99■■□□□ 1.43
TGFBR1-202ENST00000374994 U2AF2P26368 475 aaKnown RBP eCLIP23.99■■□□□ 1.43
TGFBR1-202ENST00000374994 TTC31Q49AM3 519 aaPredicted RBP23.98■■□□□ 1.43
TGFBR1-202ENST00000374994 MAP3K19Q56UN5 1328 aa23.98■■□□□ 1.43
TGFBR1-202ENST00000374994 CUTAO60888 179 aa23.98■■□□□ 1.43
TGFBR1-202ENST00000374994 SBNO1A3KN83 1393 aa23.98■■□□□ 1.43
TGFBR1-202ENST00000374994 NLRP12P59046 1061 aa23.98■■□□□ 1.43
TGFBR1-202ENST00000374994 PPP4R3AQ6IN85 833 aa23.98■■□□□ 1.43
TGFBR1-202ENST00000374994 RBM28Q9NW13 759 aaKnown RBP23.98■■□□□ 1.43
TGFBR1-202ENST00000374994 ZNF521Q96K83 1311 aa23.97■■□□□ 1.43
TGFBR1-202ENST00000374994 NAPGQ99747 312 aaPredicted RBP23.97■■□□□ 1.43
TGFBR1-202ENST00000374994 EXOC5O00471 708 aa23.97■■□□□ 1.43
TGFBR1-202ENST00000374994 GTF3C6Q969F1 213 aa23.97■■□□□ 1.43
TGFBR1-202ENST00000374994 ANKS4BQ8N8V4 417 aa23.97■■□□□ 1.43
TGFBR1-202ENST00000374994 KCNH3Q9ULD8 1083 aa23.97■■□□□ 1.43
TGFBR1-202ENST00000374994 CCDC77Q9BR77 488 aa23.97■■□□□ 1.43
TGFBR1-202ENST00000374994 C6orf50Q9HD87 102 aa23.97■■□□□ 1.43
TGFBR1-202ENST00000374994 RHOXF2BP0C7M4 288 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 CCDC121Q6ZUS5 278 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 OTUD6BQ8N6M0 293 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 RHOXF2Q9BQY4 288 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 GSPT1P15170 499 aaKnown RBP23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 TNNC1P63316 161 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 MICALL1Q8N3F8 863 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 MMRN2Q9H8L6 949 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 SLC39A6Q13433 755 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 TNNI3KQ59H18 835 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 GPATCH11Q8N954 259 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 TTC14Q96N46 770 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 FPGT-TNNI3KV9GXZ4 949 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 ASXL2Q76L83 1435 aa23.96■■□□□ 1.43
TGFBR1-202ENST00000374994 STX17P56962 302 aa23.95■■□□□ 1.43
TGFBR1-202ENST00000374994 IGSF22Q8N9C0 903 aa23.95■■□□□ 1.43
TGFBR1-202ENST00000374994 RNMTO43148 476 aaKnown RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms