RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 PPP1R1BQ9UD71 204 aaPredicted RBP20.85■□□□□ 0.93
HLA-DMA-201ENST00000374843 SALL1Q9NSC2 1324 aa20.84■□□□□ 0.93
HLA-DMA-201ENST00000374843 FER1L6Q2WGJ9 1857 aa20.84■□□□□ 0.93
HLA-DMA-201ENST00000374843 IGSF3O75054 1194 aa20.84■□□□□ 0.93
HLA-DMA-201ENST00000374843 LRRFIP1Q32MZ4 808 aaKnown RBP20.84■□□□□ 0.93
HLA-DMA-201ENST00000374843 NLGN2Q8NFZ4 835 aa20.84■□□□□ 0.93
HLA-DMA-201ENST00000374843 COA1Q9GZY4 146 aa20.84■□□□□ 0.93
HLA-DMA-201ENST00000374843 CD209Q9NNX6 404 aa20.84■□□□□ 0.93
HLA-DMA-201ENST00000374843 SEC24BO95487 1268 aa20.83■□□□□ 0.93
HLA-DMA-201ENST00000374843 ZFYP08048 801 aaPredicted RBP20.83■□□□□ 0.93
HLA-DMA-201ENST00000374843 KLHL34Q8N239 644 aa20.83■□□□□ 0.93
HLA-DMA-201ENST00000374843 ZC3H12CQ9C0D7 883 aaKnown RBP20.83■□□□□ 0.93
HLA-DMA-201ENST00000374843 SGSM2O43147 1006 aa20.82■□□□□ 0.92
HLA-DMA-201ENST00000374843 KIAA2012Q0VF49 1180 aa20.82■□□□□ 0.92
HLA-DMA-201ENST00000374843 WASHC4Q2M389 1173 aa20.82■□□□□ 0.92
HLA-DMA-201ENST00000374843 RUFY2Q8WXA3 655 aa20.82■□□□□ 0.92
HLA-DMA-201ENST00000374843 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.82■□□□□ 0.92
HLA-DMA-201ENST00000374843 ZNF219Q9P2Y4 722 aaPredicted RBP20.82■□□□□ 0.92
HLA-DMA-201ENST00000374843 IQSEC3Q9UPP2 1182 aaPredicted RBP20.82■□□□□ 0.92
HLA-DMA-201ENST00000374843 FAM205AQ6ZU69 1335 aa20.81■□□□□ 0.92
HLA-DMA-201ENST00000374843 ZNF646O15015 1829 aaPredicted RBP20.81■□□□□ 0.92
HLA-DMA-201ENST00000374843 RNF113AO15541 343 aaKnown RBP20.81■□□□□ 0.92
HLA-DMA-201ENST00000374843 NMIQ13287 307 aaPredicted RBP20.81■□□□□ 0.92
HLA-DMA-201ENST00000374843 ZMYM1Q5SVZ6 1142 aa20.81■□□□□ 0.92
HLA-DMA-201ENST00000374843 TMED8Q6PL24 325 aaPredicted RBP20.81■□□□□ 0.92
HLA-DMA-201ENST00000374843 FHDC1Q9C0D6 1143 aaPredicted RBP20.81■□□□□ 0.92
HLA-DMA-201ENST00000374843 VPS33BQ9H267 617 aa20.81■□□□□ 0.92
HLA-DMA-201ENST00000374843 TSHZ2Q9NRE2 1034 aa20.81■□□□□ 0.92
HLA-DMA-201ENST00000374843 LTBP3Q9NS15 1303 aa20.8■□□□□ 0.92
HLA-DMA-201ENST00000374843 A0A0D9SFI3 127 aa20.8■□□□□ 0.92
HLA-DMA-201ENST00000374843 ZSCAN25Q6NSZ9 544 aa20.8■□□□□ 0.92
HLA-DMA-201ENST00000374843 WDR66Q8TBY9 1149 aa20.8■□□□□ 0.92
HLA-DMA-201ENST00000374843 IL25Q9H293 177 aa20.8■□□□□ 0.92
HLA-DMA-201ENST00000374843 MYO5AQ9Y4I1 1855 aaKnown RBP20.79■□□□□ 0.92
HLA-DMA-201ENST00000374843 EPB41L2O43491 1005 aaKnown RBP20.79■□□□□ 0.92
HLA-DMA-201ENST00000374843 FRAT2O75474 233 aaPredicted RBP20.79■□□□□ 0.92
HLA-DMA-201ENST00000374843 REC8O95072 547 aa20.79■□□□□ 0.92
HLA-DMA-201ENST00000374843 ADD2P35612 726 aa20.79■□□□□ 0.92
HLA-DMA-201ENST00000374843 MAP3K12Q12852 859 aa20.79■□□□□ 0.92
HLA-DMA-201ENST00000374843 UBE3CQ15386 1083 aa20.79■□□□□ 0.92
HLA-DMA-201ENST00000374843 ZGPATQ8N5A5 531 aaKnown RBP20.79■□□□□ 0.92
HLA-DMA-201ENST00000374843 FAM227BQ96M60 508 aa20.79■□□□□ 0.92
HLA-DMA-201ENST00000374843 TCRBV5S4A2TA0A5A2 114 aa20.78■□□□□ 0.92
HLA-DMA-201ENST00000374843 RIMBP2O15034 1052 aa20.78■□□□□ 0.92
HLA-DMA-201ENST00000374843 PDE6AP16499 860 aa20.78■□□□□ 0.92
HLA-DMA-201ENST00000374843 MFAP1P55081 439 aaKnown RBP20.78■□□□□ 0.92
HLA-DMA-201ENST00000374843 CWC27Q6UX04 472 aaKnown RBP20.78■□□□□ 0.92
HLA-DMA-201ENST00000374843 PODNQ7Z5L7 613 aa20.78■□□□□ 0.92
HLA-DMA-201ENST00000374843 APPBP2Q92624 585 aa20.78■□□□□ 0.92
HLA-DMA-201ENST00000374843 HELLSQ9NRZ9 838 aa20.78■□□□□ 0.92
HLA-DMA-201ENST00000374843 WWC3Q9ULE0 1092 aa20.78■□□□□ 0.92
HLA-DMA-201ENST00000374843 COL4A5P29400 1685 aa20.77■□□□□ 0.92
HLA-DMA-201ENST00000374843 PSME4Q14997 1843 aa20.77■□□□□ 0.92
HLA-DMA-201ENST00000374843 IDH1O75874 414 aaKnown RBP20.77■□□□□ 0.92
HLA-DMA-201ENST00000374843 CHAF1AQ13111 956 aaPredicted RBP20.77■□□□□ 0.92
HLA-DMA-201ENST00000374843 UPF2Q9HAU5 1272 aaKnown RBP20.77■□□□□ 0.92
HLA-DMA-201ENST00000374843 CHD4Q14839 1912 aa20.76■□□□□ 0.91
HLA-DMA-201ENST00000374843 NFKBIEO00221 500 aa20.76■□□□□ 0.91
HLA-DMA-201ENST00000374843 CHGBP05060 677 aa20.76■□□□□ 0.91
HLA-DMA-201ENST00000374843 TBC1D22AQ8WUA7 517 aa20.76■□□□□ 0.91
HLA-DMA-201ENST00000374843 TAOK3Q9H2K8 898 aa20.76■□□□□ 0.91
HLA-DMA-201ENST00000374843 BCS1LQ9Y276 419 aa20.76■□□□□ 0.91
HLA-DMA-201ENST00000374843 MAST3O60307 1309 aa20.76■□□□□ 0.91
HLA-DMA-201ENST00000374843 PPIP5K2O43314 1243 aa20.75■□□□□ 0.91
HLA-DMA-201ENST00000374843 AOC3Q16853 763 aa20.75■□□□□ 0.91
HLA-DMA-201ENST00000374843 MCMDC2Q4G0Z9 681 aa20.75■□□□□ 0.91
HLA-DMA-201ENST00000374843 SLC9C2Q5TAH2 1124 aa20.75■□□□□ 0.91
HLA-DMA-201ENST00000374843 SPTY2D1Q68D10 685 aaPredicted RBP20.75■□□□□ 0.91
HLA-DMA-201ENST00000374843 SYT17Q9BSW7 474 aa20.75■□□□□ 0.91
HLA-DMA-201ENST00000374843 LRP2BPQ9P2M1 347 aa20.75■□□□□ 0.91
HLA-DMA-201ENST00000374843 SCN9AQ15858 1988 aa20.74■□□□□ 0.91
HLA-DMA-201ENST00000374843 ECE2O60344 883 aa20.74■□□□□ 0.91
HLA-DMA-201ENST00000374843 FKBP1AP62942 108 aaKnown RBP20.74■□□□□ 0.91
HLA-DMA-201ENST00000374843 DOK7Q18PE1 504 aa20.74■□□□□ 0.91
HLA-DMA-201ENST00000374843 ERICH6Q7L0X2 663 aa20.74■□□□□ 0.91
HLA-DMA-201ENST00000374843 ZNF589Q86UQ0 364 aaPredicted RBP20.74■□□□□ 0.91
HLA-DMA-201ENST00000374843 TBC1D32Q96NH3 1257 aa20.74■□□□□ 0.91
HLA-DMA-201ENST00000374843 LSG1Q9H089 658 aaKnown RBP20.74■□□□□ 0.91
HLA-DMA-201ENST00000374843 SUGT1Q9Y2Z0 365 aa20.74■□□□□ 0.91
HLA-DMA-201ENST00000374843 CCDC171Q6TFL3 1326 aa20.74■□□□□ 0.91
HLA-DMA-201ENST00000374843 ZNF532Q9HCE3 1301 aa20.74■□□□□ 0.91
HLA-DMA-201ENST00000374843 MAGEB6Q8N7X4 407 aa20.73■□□□□ 0.91
HLA-DMA-201ENST00000374843 OSBP2Q969R2 916 aa20.73■□□□□ 0.91
HLA-DMA-201ENST00000374843 USP26Q9BXU7 913 aa20.73■□□□□ 0.91
HLA-DMA-201ENST00000374843 DBNDD1Q9H9R9 158 aa20.73■□□□□ 0.91
HLA-DMA-201ENST00000374843 ABCF2Q9UG63 623 aa20.73■□□□□ 0.91
HLA-DMA-201ENST00000374843 CCDC88AQ3V6T2 1871 aa20.73■□□□□ 0.91
HLA-DMA-201ENST00000374843 M0R2C6 588 aa20.72■□□□□ 0.91
HLA-DMA-201ENST00000374843 PRDX5P30044 214 aa20.72■□□□□ 0.91
HLA-DMA-201ENST00000374843 IARSP41252 1262 aaKnown RBP20.72■□□□□ 0.91
HLA-DMA-201ENST00000374843 RBM25P49756 843 aaKnown RBP20.72■□□□□ 0.91
HLA-DMA-201ENST00000374843 SLFNL1Q499Z3 407 aa20.72■□□□□ 0.91
HLA-DMA-201ENST00000374843 ZNF384Q8TF68 577 aa20.72■□□□□ 0.91
HLA-DMA-201ENST00000374843 NSUN4Q96CB9 384 aaKnown RBP20.72■□□□□ 0.91
HLA-DMA-201ENST00000374843 SEC62Q99442 399 aaKnown RBP20.72■□□□□ 0.91
HLA-DMA-201ENST00000374843 ANO2Q9NQ90 1003 aa20.72■□□□□ 0.91
HLA-DMA-201ENST00000374843 ZNF277Q9NRM2 450 aaPredicted RBP20.72■□□□□ 0.91
HLA-DMA-201ENST00000374843 RAI14Q9P0K7 980 aa20.72■□□□□ 0.91
HLA-DMA-201ENST00000374843 G3V3G9 751 aa20.71■□□□□ 0.91
HLA-DMA-201ENST00000374843 GTF2IP78347 998 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms