RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 COA1Q9GZY4 146 aa17.11■□□□□ 0.33
TCEA3-201ENST00000374601 SNRKQ9NRH2 765 aa17.11■□□□□ 0.33
TCEA3-201ENST00000374601 GNL3LQ9NVN8 582 aaKnown RBP17.11■□□□□ 0.33
TCEA3-201ENST00000374601 SEMA3EO15041 775 aa17.1■□□□□ 0.33
TCEA3-201ENST00000374601 MAP4K4O95819 1239 aaPredicted RBP17.1■□□□□ 0.33
TCEA3-201ENST00000374601 BMP2KLQ5H9B9 411 aa17.1■□□□□ 0.33
TCEA3-201ENST00000374601 SPATA5Q8NB90 893 aa17.1■□□□□ 0.33
TCEA3-201ENST00000374601 EDC3Q96F86 508 aaKnown RBP17.1■□□□□ 0.33
TCEA3-201ENST00000374601 VPS33BQ9H267 617 aa17.1■□□□□ 0.33
TCEA3-201ENST00000374601 DBNDD1Q9H9R9 158 aa17.1■□□□□ 0.33
TCEA3-201ENST00000374601 PDS5AQ29RF7 1337 aaKnown RBP17.1■□□□□ 0.33
TCEA3-201ENST00000374601 ECE2O60344 883 aa17.09■□□□□ 0.33
TCEA3-201ENST00000374601 ZAP70P43403 619 aa17.09■□□□□ 0.33
TCEA3-201ENST00000374601 ARHGAP27Q6ZUM4 889 aa17.09■□□□□ 0.33
TCEA3-201ENST00000374601 DNAJC2Q99543 621 aaKnown RBP17.09■□□□□ 0.33
TCEA3-201ENST00000374601 ADAMTSL1Q8N6G6 1762 aa17.09■□□□□ 0.33
TCEA3-201ENST00000374601 MYH2Q9UKX2 1941 aa17.08■□□□□ 0.33
TCEA3-201ENST00000374601 LARGE2Q8N3Y3 721 aa17.08■□□□□ 0.32
TCEA3-201ENST00000374601 ANTXR1Q9H6X2 564 aa17.08■□□□□ 0.32
TCEA3-201ENST00000374601 PAG1Q9NWQ8 432 aa17.08■□□□□ 0.32
TCEA3-201ENST00000374601 DENND2AQ9ULE3 1009 aa17.08■□□□□ 0.32
TCEA3-201ENST00000374601 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
TCEA3-201ENST00000374601 FAM205AQ6ZU69 1335 aa17.07■□□□□ 0.32
TCEA3-201ENST00000374601 YDJCA8MPS7 323 aa17.07■□□□□ 0.32
TCEA3-201ENST00000374601 GOLIM4O00461 696 aa17.07■□□□□ 0.32
TCEA3-201ENST00000374601 CYP2E1P05181 493 aaPredicted RBP17.07■□□□□ 0.32
TCEA3-201ENST00000374601 SDSP20132 328 aa17.07■□□□□ 0.32
TCEA3-201ENST00000374601 PIH1D3Q9NQM4 214 aaKnown RBP17.07■□□□□ 0.32
TCEA3-201ENST00000374601 JAG2Q9Y219 1238 aa17.07■□□□□ 0.32
TCEA3-201ENST00000374601 CHAF1AQ13111 956 aaPredicted RBP17.06■□□□□ 0.32
TCEA3-201ENST00000374601 GPR162Q16538 588 aa17.06■□□□□ 0.32
TCEA3-201ENST00000374601 PODNQ7Z5L7 613 aa17.06■□□□□ 0.32
TCEA3-201ENST00000374601 KCNQ5Q9NR82 932 aa17.06■□□□□ 0.32
TCEA3-201ENST00000374601 TRIM6-TRIM34B2RNG4 842 aa17.05■□□□□ 0.32
TCEA3-201ENST00000374601 G3V3G9 751 aa17.05■□□□□ 0.32
TCEA3-201ENST00000374601 FRAT2O75474 233 aaPredicted RBP17.05■□□□□ 0.32
TCEA3-201ENST00000374601 DCAF8Q5TAQ9 597 aa17.05■□□□□ 0.32
TCEA3-201ENST00000374601 TBC1D9Q6ZT07 1266 aa17.05■□□□□ 0.32
TCEA3-201ENST00000374601 NIM1KQ8IY84 436 aa17.05■□□□□ 0.32
TCEA3-201ENST00000374601 EVI5LQ96CN4 794 aa17.05■□□□□ 0.32
TCEA3-201ENST00000374601 SALL1Q9NSC2 1324 aa17.04■□□□□ 0.32
TCEA3-201ENST00000374601 CDK5RAP2Q96SN8 1893 aa17.04■□□□□ 0.32
TCEA3-201ENST00000374601 GTF2IP78347 998 aa17.04■□□□□ 0.32
TCEA3-201ENST00000374601 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
TCEA3-201ENST00000374601 RILPL2Q969X0 211 aa17.04■□□□□ 0.32
TCEA3-201ENST00000374601 RFX7Q2KHR2 1363 aa17.03■□□□□ 0.32
TCEA3-201ENST00000374601 LMNB1P20700 586 aa17.03■□□□□ 0.32
TCEA3-201ENST00000374601 KBTBD3Q8NAB2 608 aa17.03■□□□□ 0.32
TCEA3-201ENST00000374601 WDR66Q8TBY9 1149 aa17.03■□□□□ 0.32
TCEA3-201ENST00000374601 ZNRF3Q9ULT6 936 aa17.03■□□□□ 0.32
TCEA3-201ENST00000374601 ECM29Q5VYK3 1845 aa17.03■□□□□ 0.32
TCEA3-201ENST00000374601 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
TCEA3-201ENST00000374601 GRIK5Q16478 980 aa17.02■□□□□ 0.32
TCEA3-201ENST00000374601 DACT2Q5SW24 774 aa17.02■□□□□ 0.32
TCEA3-201ENST00000374601 CERS5Q8N5B7 392 aa17.02■□□□□ 0.32
TCEA3-201ENST00000374601 FSD1Q9BTV5 496 aa17.02■□□□□ 0.32
TCEA3-201ENST00000374601 MXD3Q9BW11 206 aa17.02■□□□□ 0.32
TCEA3-201ENST00000374601 USP17L3A6NCW0 530 aa17.01■□□□□ 0.31
TCEA3-201ENST00000374601 USP17L4A6NCW7 530 aa17.01■□□□□ 0.31
TCEA3-201ENST00000374601 GRIN3BO60391 1043 aa17.01■□□□□ 0.31
TCEA3-201ENST00000374601 MFSD14BQ5SR56 506 aa17.01■□□□□ 0.31
TCEA3-201ENST00000374601 STRIP1Q5VSL9 837 aa17.01■□□□□ 0.31
TCEA3-201ENST00000374601 TTLL5Q6EMB2 1281 aa17.01■□□□□ 0.31
TCEA3-201ENST00000374601 USP17L1Q7RTZ2 530 aa17.01■□□□□ 0.31
TCEA3-201ENST00000374601 JDP2Q8WYK2 163 aa17.01■□□□□ 0.31
TCEA3-201ENST00000374601 FBXW7Q969H0 707 aa17.01■□□□□ 0.31
TCEA3-201ENST00000374601 FZD9O00144 591 aa17■□□□□ 0.31
TCEA3-201ENST00000374601 RAD17O75943 681 aa17■□□□□ 0.31
TCEA3-201ENST00000374601 CHGBP05060 677 aa17■□□□□ 0.31
TCEA3-201ENST00000374601 PRDX5P30044 214 aa17■□□□□ 0.31
TCEA3-201ENST00000374601 CXCL9Q07325 125 aa17■□□□□ 0.31
TCEA3-201ENST00000374601 TBC1D22AQ8WUA7 517 aa17■□□□□ 0.31
TCEA3-201ENST00000374601 ABCF2Q9UG63 623 aa17■□□□□ 0.31
TCEA3-201ENST00000374601 FOCADQ5VW36 1801 aa17■□□□□ 0.31
TCEA3-201ENST00000374601 ZNF541Q9H0D2 1346 aa16.99■□□□□ 0.31
TCEA3-201ENST00000374601 PSMD14O00487 310 aa16.99■□□□□ 0.31
TCEA3-201ENST00000374601 CDC45O75419 566 aa16.99■□□□□ 0.31
TCEA3-201ENST00000374601 IDH1O75874 414 aaKnown RBP16.99■□□□□ 0.31
TCEA3-201ENST00000374601 FKBP1AP62942 108 aaKnown RBP16.99■□□□□ 0.31
TCEA3-201ENST00000374601 SLFNL1Q499Z3 407 aa16.99■□□□□ 0.31
TCEA3-201ENST00000374601 ZNF384Q8TF68 577 aa16.99■□□□□ 0.31
TCEA3-201ENST00000374601 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
TCEA3-201ENST00000374601 LRP2BPQ9P2M1 347 aa16.99■□□□□ 0.31
TCEA3-201ENST00000374601 PDE6AP16499 860 aa16.98■□□□□ 0.31
TCEA3-201ENST00000374601 CHMLP26374 656 aa16.98■□□□□ 0.31
TCEA3-201ENST00000374601 C9orf131Q5VYM1 1079 aa16.98■□□□□ 0.31
TCEA3-201ENST00000374601 ERICH6Q7L0X2 663 aa16.98■□□□□ 0.31
TCEA3-201ENST00000374601 ZGPATQ8N5A5 531 aaKnown RBP16.98■□□□□ 0.31
TCEA3-201ENST00000374601 TCRBV5S4A2TA0A5A2 114 aa16.97■□□□□ 0.31
TCEA3-201ENST00000374601 LDHBP07195 334 aaKnown RBP16.97■□□□□ 0.31
TCEA3-201ENST00000374601 VIL1P09327 827 aaKnown RBP16.97■□□□□ 0.31
TCEA3-201ENST00000374601 ADD2P35612 726 aa16.97■□□□□ 0.31
TCEA3-201ENST00000374601 MECOMQ03112 1051 aa16.97■□□□□ 0.31
TCEA3-201ENST00000374601 MAP3K12Q12852 859 aa16.97■□□□□ 0.31
TCEA3-201ENST00000374601 C8orf34Q49A92 452 aa16.97■□□□□ 0.31
TCEA3-201ENST00000374601 SPTY2D1Q68D10 685 aaPredicted RBP16.97■□□□□ 0.31
TCEA3-201ENST00000374601 TICAM2Q86XR7 235 aa16.97■□□□□ 0.31
TCEA3-201ENST00000374601 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.97■□□□□ 0.31
TCEA3-201ENST00000374601 RAI14Q9P0K7 980 aa16.97■□□□□ 0.31
TCEA3-201ENST00000374601 A0A0D9SFI3 127 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms