RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
PTPN20-204ENST00000374346 ABCC12Q96J65 1359 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 M0R2C6 588 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 GSDMDP57764 484 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 GUCY1B3Q02153 619 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 TAF7LQ5H9L4 462 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 PPP4R3BQ5MIZ7 849 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 SYNE3Q6ZMZ3 975 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 CHST3Q7LGC8 479 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 RGS22Q8NE09 1264 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 NCOA7Q8NI08 942 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 ZNF594Q96JF6 807 aaPredicted RBP13.3□□□□□ -0.28
PTPN20-204ENST00000374346 FTOQ9C0B1 505 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTPN20-204ENST00000374346 YEATS4O95619 227 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 SLFNL1Q499Z3 407 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTPN20-204ENST00000374346 POLR3EQ9NVU0 708 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 PCDHA7Q9UN72 937 aa13.3□□□□□ -0.28
PTPN20-204ENST00000374346 RBM6P78332 1123 aaKnown RBP13.29□□□□□ -0.28
PTPN20-204ENST00000374346 ANKRD7Q92527 254 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 OSBP2Q969R2 916 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 PKNOX2Q96KN3 472 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 WDR19Q8NEZ3 1342 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 ZNF213O14771 459 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 NRDCO43847 1150 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 A1BGP04217 495 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 TRDNQ13061 729 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 CCDC144BQ3MJ40 725 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 TOM1L2Q6ZVM7 507 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 DHX40Q8IX18 779 aaKnown RBP13.29□□□□□ -0.28
PTPN20-204ENST00000374346 CCDC144CPQ8IYA2 1237 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 FMR1NBQ8N0W7 255 aaPredicted RBP13.29□□□□□ -0.28
PTPN20-204ENST00000374346 APPBP2Q92624 585 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 DDX17Q92841 729 aaKnown RBP13.29□□□□□ -0.28
PTPN20-204ENST00000374346 XAGE2Q96GT9 111 aa13.29□□□□□ -0.28
PTPN20-204ENST00000374346 GOLGA8BA8MQT2 603 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 PRC1O43663 620 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 SKILP12757 684 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 CEP135Q66GS9 1140 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 LINC00301Q8NCQ3 95 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 FBXO18Q8NFZ0 1043 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 BPIFA3Q9BQP9 254 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 IMPACTQ9P2X3 320 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 SPATA31A3Q5VYP0 1347 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 MYH7P12883 1935 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 KLF18A0A0U1RQI7 1052 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 FAM177BA6PVY3 158 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 KIF2AO00139 706 aaPredicted RBP13.28□□□□□ -0.28
PTPN20-204ENST00000374346 SPTLC2O15270 562 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 FDPSP14324 419 aaKnown RBP13.28□□□□□ -0.28
PTPN20-204ENST00000374346 PTPN14Q15678 1187 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 TTLL5Q6EMB2 1281 aa13.28□□□□□ -0.28
PTPN20-204ENST00000374346 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
PTPN20-204ENST00000374346 ORC3Q9UBD5 711 aaPredicted RBP13.28□□□□□ -0.28
PTPN20-204ENST00000374346 FGAP02671 866 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 IFIT5Q13325 482 aaKnown RBP13.27□□□□□ -0.29
PTPN20-204ENST00000374346 TCIRG1Q13488 830 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 FILIP1Q7Z7B0 1213 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 AOPEPQ8N6M6 819 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 PUS3Q9BZE2 481 aaKnown RBP13.27□□□□□ -0.29
PTPN20-204ENST00000374346 KIAA1468Q9P260 1216 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 WDR17Q8IZU2 1322 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 A0A1B0GVL5 298 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 CCDC69A6NI79 296 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 CDKL5O76039 1030 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 HAND2P61296 217 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 KIF6Q6ZMV9 814 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 FEZ1Q99689 392 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 ISCA1Q9BUE6 129 aa13.27□□□□□ -0.29
PTPN20-204ENST00000374346 KCPQ6ZWJ8 1503 aa13.26□□□□□ -0.29
PTPN20-204ENST00000374346 A0A0G2JLW4 131 aa13.26□□□□□ -0.29
PTPN20-204ENST00000374346 POLR3DP05423 398 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-204ENST00000374346 NKX1-1Q15270 411 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-204ENST00000374346 MYSM1Q5VVJ2 828 aa13.26□□□□□ -0.29
PTPN20-204ENST00000374346 CPLX2Q6PUV4 134 aaKnown RBP13.26□□□□□ -0.29
PTPN20-204ENST00000374346 MB21D2Q8IYB1 491 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-204ENST00000374346 PAPPAQ13219 1627 aa13.26□□□□□ -0.29
PTPN20-204ENST00000374346 PPFIA3O75145 1194 aa13.25□□□□□ -0.29
PTPN20-204ENST00000374346 SLC3A2P08195 630 aaKnown RBP13.25□□□□□ -0.29
PTPN20-204ENST00000374346 NDUFA8P51970 172 aa13.25□□□□□ -0.29
PTPN20-204ENST00000374346 TRIM28Q13263 835 aaKnown RBP13.25□□□□□ -0.29
PTPN20-204ENST00000374346 TTF1Q15361 905 aaPredicted RBP13.25□□□□□ -0.29
PTPN20-204ENST00000374346 JMYQ8N9B5 988 aa13.25□□□□□ -0.29
PTPN20-204ENST00000374346 ZNF592Q92610 1267 aa13.25□□□□□ -0.29
PTPN20-204ENST00000374346 TEX13AQ9BXU3 409 aaPredicted RBP13.25□□□□□ -0.29
PTPN20-204ENST00000374346 PRDM11Q9NQV5 511 aa13.25□□□□□ -0.29
PTPN20-204ENST00000374346 CGNQ9P2M7 1197 aaKnown RBP13.25□□□□□ -0.29
PTPN20-204ENST00000374346 NWD2Q9ULI1 1742 aa13.25□□□□□ -0.29
PTPN20-204ENST00000374346 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.25□□□□□ -0.29
PTPN20-204ENST00000374346 PCCAP05165 728 aaPredicted RBP13.25□□□□□ -0.29
PTPN20-204ENST00000374346 PLA2G12BQ9BX93 195 aa13.25□□□□□ -0.29
PTPN20-204ENST00000374346 GPAA1O43292 621 aa13.24□□□□□ -0.29
PTPN20-204ENST00000374346 IL2RBP14784 551 aa13.24□□□□□ -0.29
PTPN20-204ENST00000374346 CCDC150Q8NCX0 1101 aa13.24□□□□□ -0.29
PTPN20-204ENST00000374346 KCND1Q9NSA2 647 aa13.24□□□□□ -0.29
PTPN20-204ENST00000374346 CLIC4Q9Y696 253 aa13.24□□□□□ -0.29
PTPN20-204ENST00000374346 CMA1P23946 247 aa13.24□□□□□ -0.29
PTPN20-204ENST00000374346 NCBP1Q09161 790 aaKnown RBP13.24□□□□□ -0.29
PTPN20-204ENST00000374346 GNL2Q13823 731 aaKnown RBP13.24□□□□□ -0.29
PTPN20-204ENST00000374346 ANO1Q5XXA6 986 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms