RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 GLI3P10071 1580 aa12.67□□□□□ -0.38
LCN2-202ENST00000372998 MAST3O60307 1309 aa12.66□□□□□ -0.38
LCN2-202ENST00000372998 A0A1B0GUL7 405 aa12.66□□□□□ -0.38
LCN2-202ENST00000372998 IKBKBO14920 756 aa12.66□□□□□ -0.38
LCN2-202ENST00000372998 NKX1-1Q15270 411 aaPredicted RBP12.66□□□□□ -0.38
LCN2-202ENST00000372998 SLFNL1Q499Z3 407 aa12.66□□□□□ -0.38
LCN2-202ENST00000372998 HSP90AB3PQ58FF7 597 aa12.66□□□□□ -0.38
LCN2-202ENST00000372998 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
LCN2-202ENST00000372998 FMR1NBQ8N0W7 255 aaPredicted RBP12.66□□□□□ -0.38
LCN2-202ENST00000372998 WASF1Q92558 559 aa12.66□□□□□ -0.38
LCN2-202ENST00000372998 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
LCN2-202ENST00000372998 USP28Q96RU2 1077 aa12.66□□□□□ -0.38
LCN2-202ENST00000372998 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.66□□□□□ -0.38
LCN2-202ENST00000372998 ZNF213O14771 459 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 CYP27B1O15528 508 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 PPP6R2O75170 966 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 KIF20AO95235 890 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 CTDNEP1O95476 244 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 CMA1P23946 247 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 NLRP12P59046 1061 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.38
LCN2-202ENST00000372998 CCDC129Q6ZRS4 1044 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 STOX1Q6ZVD7 989 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 LINC00301Q8NCQ3 95 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 FBXO18Q8NFZ0 1043 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 EDC3Q96F86 508 aaKnown RBP12.65□□□□□ -0.38
LCN2-202ENST00000372998 ERO1AQ96HE7 468 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 TMEM87BQ96K49 555 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 KIAA1468Q9P260 1216 aa12.65□□□□□ -0.38
LCN2-202ENST00000372998 MAP3K15Q6ZN16 1313 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 ATRNO75882 1429 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 ATP5J2-PTCD1G3V325 749 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 SPTLC2O15270 562 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 PTCD1O75127 700 aaKnown RBP12.64□□□□□ -0.39
LCN2-202ENST00000372998 SLC3A2P08195 630 aaKnown RBP12.64□□□□□ -0.39
LCN2-202ENST00000372998 SKILP12757 684 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 GABPB1Q06547 395 aaPredicted RBP12.64□□□□□ -0.39
LCN2-202ENST00000372998 DMTNQ08495 405 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 TRIM29Q14134 588 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 TAF7LQ5H9L4 462 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 FCHSD1Q86WN1 690 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 ZCRB1Q8TBF4 217 aaKnown RBP12.64□□□□□ -0.39
LCN2-202ENST00000372998 CACTINQ8WUQ7 758 aaKnown RBP12.64□□□□□ -0.39
LCN2-202ENST00000372998 SEC62Q99442 399 aaKnown RBP12.64□□□□□ -0.39
LCN2-202ENST00000372998 MTA3Q9BTC8 594 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 DACH1Q9UI36 760 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 NAP1L2Q9ULW6 460 aaPredicted RBP12.64□□□□□ -0.39
LCN2-202ENST00000372998 TAF6LQ9Y6J9 622 aa12.64□□□□□ -0.39
LCN2-202ENST00000372998 ZMYM6O95789 1325 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 CDHR2Q9BYE9 1310 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 GOLGA6L9A6NEM1 432 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 CCDC69A6NI79 296 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 PRC1O43663 620 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 PCCAP05165 728 aaPredicted RBP12.63□□□□□ -0.39
LCN2-202ENST00000372998 TPM1P09493 284 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 UQCRFS1P1P0C7P4 283 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 CCT2P78371 535 aaKnown RBP12.63□□□□□ -0.39
LCN2-202ENST00000372998 TCIRG1Q13488 830 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 WASHC4Q2M389 1173 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 CT47A1Q5JQC4 288 aaPredicted RBP12.63□□□□□ -0.39
LCN2-202ENST00000372998 MYSM1Q5VVJ2 828 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 TAF3Q5VWG9 929 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 NYAP1Q6ZVC0 841 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 DHX40Q8IX18 779 aaKnown RBP12.63□□□□□ -0.39
LCN2-202ENST00000372998 C17orf53Q8N3J3 647 aaPredicted RBP12.63□□□□□ -0.39
LCN2-202ENST00000372998 MPNDQ8N594 471 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 ZNF397Q8NF99 534 aaPredicted RBP12.63□□□□□ -0.39
LCN2-202ENST00000372998 C16orf45Q96MC5 204 aaPredicted RBP12.63□□□□□ -0.39
LCN2-202ENST00000372998 ISCA1Q9BUE6 129 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 SRRTQ9BXP5 876 aaKnown RBP12.63□□□□□ -0.39
LCN2-202ENST00000372998 ORC3Q9UBD5 711 aaPredicted RBP12.63□□□□□ -0.39
LCN2-202ENST00000372998 PCDHA7Q9UN72 937 aa12.63□□□□□ -0.39
LCN2-202ENST00000372998 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 TNS2Q63HR2 1409 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 FAM237AA0A1B0GTK4 181 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 IFIT5Q13325 482 aaKnown RBP12.62□□□□□ -0.39
LCN2-202ENST00000372998 ANO1Q5XXA6 986 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 OLFM4Q6UX06 510 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 C11orf57Q6ZUT1 292 aaPredicted RBP12.62□□□□□ -0.39
LCN2-202ENST00000372998 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
LCN2-202ENST00000372998 AOPEPQ8N6M6 819 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 C4AP0C0L4 1744 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 WDR17Q8IZU2 1322 aa12.62□□□□□ -0.39
LCN2-202ENST00000372998 MYH3P11055 1940 aa12.61□□□□□ -0.39
LCN2-202ENST00000372998 KLF18A0A0U1RQI7 1052 aa12.61□□□□□ -0.39
LCN2-202ENST00000372998 GOLGA8BA8MQT2 603 aa12.61□□□□□ -0.39
LCN2-202ENST00000372998 SLU7O95391 586 aaKnown RBP12.61□□□□□ -0.39
LCN2-202ENST00000372998 SFPQP23246 707 aaKnown RBP eCLIP12.61□□□□□ -0.39
LCN2-202ENST00000372998 RCAN1P53805 252 aa12.61□□□□□ -0.39
LCN2-202ENST00000372998 TIMM10P62072 90 aa12.61□□□□□ -0.39
LCN2-202ENST00000372998 CEBPZQ03701 1054 aaKnown RBP12.61□□□□□ -0.39
LCN2-202ENST00000372998 SLC39A14Q15043 492 aa12.61□□□□□ -0.39
LCN2-202ENST00000372998 UBE3CQ15386 1083 aa12.61□□□□□ -0.39
LCN2-202ENST00000372998 ALX1Q15699 326 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms