RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 CCDC66A2RUB6 948 aa17.22■□□□□ 0.35
COL9A2-202ENST00000372748 DCAF5Q96JK2 942 aa17.22■□□□□ 0.35
COL9A2-202ENST00000372748 L2HGDHQ9H9P8 463 aa17.22■□□□□ 0.35
COL9A2-202ENST00000372748 TAOK2Q9UL54 1235 aa17.22■□□□□ 0.35
COL9A2-202ENST00000372748 CAMTA1Q9Y6Y1 1673 aa17.21■□□□□ 0.35
COL9A2-202ENST00000372748 KIF2AO00139 706 aaPredicted RBP17.21■□□□□ 0.35
COL9A2-202ENST00000372748 H2AFXP16104 143 aaPredicted RBP17.21■□□□□ 0.35
COL9A2-202ENST00000372748 SF3A1Q15459 793 aaKnown RBP17.21■□□□□ 0.35
COL9A2-202ENST00000372748 NOL10Q9BSC4 688 aaKnown RBP17.21■□□□□ 0.35
COL9A2-202ENST00000372748 ATF3P18847 181 aa17.21■□□□□ 0.35
COL9A2-202ENST00000372748 TIMM10P62072 90 aa17.21■□□□□ 0.35
COL9A2-202ENST00000372748 PTPN21Q16825 1174 aa17.21■□□□□ 0.35
COL9A2-202ENST00000372748 FHOD1Q9Y613 1164 aa17.21■□□□□ 0.35
COL9A2-202ENST00000372748 CLIC4Q9Y696 253 aa17.21■□□□□ 0.35
COL9A2-202ENST00000372748 SCN11AQ9UI33 1791 aa17.21■□□□□ 0.34
COL9A2-202ENST00000372748 GTF2E1P29083 439 aaPredicted RBP17.2■□□□□ 0.34
COL9A2-202ENST00000372748 LMOD1P29536 600 aaPredicted RBP17.2■□□□□ 0.34
COL9A2-202ENST00000372748 KIAA1468Q9P260 1216 aa17.2■□□□□ 0.34
COL9A2-202ENST00000372748 DNAI1Q9UI46 699 aa17.2■□□□□ 0.34
COL9A2-202ENST00000372748 BMS1Q14692 1282 aaKnown RBP17.2■□□□□ 0.34
COL9A2-202ENST00000372748 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
COL9A2-202ENST00000372748 TRERF1Q96PN7 1200 aa17.2■□□□□ 0.34
COL9A2-202ENST00000372748 GPHNQ9NQX3 736 aaPredicted RBP17.2■□□□□ 0.34
COL9A2-202ENST00000372748 GJB4Q9NTQ9 266 aa17.2■□□□□ 0.34
COL9A2-202ENST00000372748 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.2■□□□□ 0.34
COL9A2-202ENST00000372748 GOLIM4O00461 696 aa17.19■□□□□ 0.34
COL9A2-202ENST00000372748 TTLL7Q6ZT98 887 aa17.19■□□□□ 0.34
COL9A2-202ENST00000372748 IMPACTQ9P2X3 320 aa17.19■□□□□ 0.34
COL9A2-202ENST00000372748 ADAMTS7Q9UKP4 1686 aa17.19■□□□□ 0.34
COL9A2-202ENST00000372748 ZNF142P52746 1687 aaPredicted RBP17.19■□□□□ 0.34
COL9A2-202ENST00000372748 STK38Q15208 465 aa17.19■□□□□ 0.34
COL9A2-202ENST00000372748 CCDC93Q567U6 631 aa17.19■□□□□ 0.34
COL9A2-202ENST00000372748 RAB11FIP4Q86YS3 637 aa17.19■□□□□ 0.34
COL9A2-202ENST00000372748 KCND1Q9NSA2 647 aa17.19■□□□□ 0.34
COL9A2-202ENST00000372748 NBPF26B4DH59 902 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 ATP1A3P13637 1013 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 PDIA3P30101 505 aaKnown RBP17.18■□□□□ 0.34
COL9A2-202ENST00000372748 NBPF14Q5TI25 921 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 ADALQ6DHV7 355 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 NBPF10Q6P3W6 841 aaKnown RBP17.18■□□□□ 0.34
COL9A2-202ENST00000372748 NBPF15Q8N660 670 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 CCDC150Q8NCX0 1101 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 ZNF594Q96JF6 807 aaPredicted RBP17.18■□□□□ 0.34
COL9A2-202ENST00000372748 HAUS7Q99871 368 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 PNMA6AP0CW24 399 aaPredicted RBP17.18■□□□□ 0.34
COL9A2-202ENST00000372748 FDPSP14324 419 aaKnown RBP17.18■□□□□ 0.34
COL9A2-202ENST00000372748 IRX5P78411 483 aaPredicted RBP17.18■□□□□ 0.34
COL9A2-202ENST00000372748 GOLGA8FQ08AF8 430 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 GOLGA8DPQ0D2H9 430 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 PLBD2Q8NHP8 589 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 TIGD1Q96MW7 591 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 CARMIL3Q8ND23 1372 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 CASP7P55210 303 aa17.18■□□□□ 0.34
COL9A2-202ENST00000372748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■□□□ 13.4
COL9A2-202ENST00000372748 AFDNP55196 1824 aaKnown RBP17.17■□□□□ 0.34
COL9A2-202ENST00000372748 E7EWF7 191 aa17.17■□□□□ 0.34
COL9A2-202ENST00000372748 POLR3GO15318 223 aaPredicted RBP17.17■□□□□ 0.34
COL9A2-202ENST00000372748 HMGB1P09429 215 aaKnown RBP17.17■□□□□ 0.34
COL9A2-202ENST00000372748 EXOSC10Q01780 885 aaKnown RBP17.17■□□□□ 0.34
COL9A2-202ENST00000372748 FAM177A1Q8N128 213 aaPredicted RBP17.17■□□□□ 0.34
COL9A2-202ENST00000372748 EPC1Q9H2F5 836 aa17.17■□□□□ 0.34
COL9A2-202ENST00000372748 ZBTB3Q9H5J0 574 aa17.17■□□□□ 0.34
COL9A2-202ENST00000372748 SALL1Q9NSC2 1324 aa17.17■□□□□ 0.34
COL9A2-202ENST00000372748 PSDA5PKW4 1024 aaPredicted RBP17.17■□□□□ 0.34
COL9A2-202ENST00000372748 VGLL3A8MV65 326 aa17.17■□□□□ 0.34
COL9A2-202ENST00000372748 A1BGP04217 495 aa17.17■□□□□ 0.34
COL9A2-202ENST00000372748 SLC3A2P08195 630 aaKnown RBP17.17■□□□□ 0.34
COL9A2-202ENST00000372748 FOXO4P98177 505 aa17.17■□□□□ 0.34
COL9A2-202ENST00000372748 TTLL5Q6EMB2 1281 aa17.17■□□□□ 0.34
COL9A2-202ENST00000372748 LINC00301Q8NCQ3 95 aa17.17■□□□□ 0.34
COL9A2-202ENST00000372748 MRC1P22897 1456 aa17.17■□□□□ 0.34
COL9A2-202ENST00000372748 NEDD4P46934 1319 aa17.16■□□□□ 0.34
COL9A2-202ENST00000372748 PLA2G4AP47712 749 aa17.16■□□□□ 0.34
COL9A2-202ENST00000372748 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
COL9A2-202ENST00000372748 UBXN4Q92575 508 aa17.16■□□□□ 0.34
COL9A2-202ENST00000372748 RTEL1Q9NZ71 1219 aa17.16■□□□□ 0.34
COL9A2-202ENST00000372748 FANCGO15287 622 aa17.16■□□□□ 0.34
COL9A2-202ENST00000372748 SEC31AO94979 1220 aaKnown RBP17.16■□□□□ 0.34
COL9A2-202ENST00000372748 NCAPHQ15003 741 aa17.16■□□□□ 0.34
COL9A2-202ENST00000372748 LRRC24Q50LG9 513 aa17.16■□□□□ 0.34
COL9A2-202ENST00000372748 KBTBD3Q8NAB2 608 aa17.16■□□□□ 0.34
COL9A2-202ENST00000372748 ZNF335Q9H4Z2 1342 aaPredicted RBP17.16■□□□□ 0.34
COL9A2-202ENST00000372748 URI1O94763 535 aaPredicted RBP17.15■□□□□ 0.34
COL9A2-202ENST00000372748 ETF1P62495 437 aaKnown RBP17.15■□□□□ 0.34
COL9A2-202ENST00000372748 ATL3Q6DD88 541 aa17.15■□□□□ 0.34
COL9A2-202ENST00000372748 ATG9AQ7Z3C6 839 aa17.15■□□□□ 0.34
COL9A2-202ENST00000372748 ZNF202O95125 648 aa17.15■□□□□ 0.34
COL9A2-202ENST00000372748 NRDCO43847 1150 aa17.14■□□□□ 0.34
COL9A2-202ENST00000372748 FANCCQ00597 558 aa17.14■□□□□ 0.34
COL9A2-202ENST00000372748 DPF2Q92785 391 aa17.14■□□□□ 0.34
COL9A2-202ENST00000372748 TMX1Q9H3N1 280 aa17.14■□□□□ 0.34
COL9A2-202ENST00000372748 PAG1Q9NWQ8 432 aa17.14■□□□□ 0.34
COL9A2-202ENST00000372748 ZNF330Q9Y3S2 320 aaPredicted RBP17.14■□□□□ 0.34
COL9A2-202ENST00000372748 SPTLC2O15270 562 aa17.14■□□□□ 0.33
COL9A2-202ENST00000372748 HSPD1P10809 573 aaKnown RBP17.14■□□□□ 0.33
COL9A2-202ENST00000372748 CYP2C19P33261 490 aa17.14■□□□□ 0.33
COL9A2-202ENST00000372748 MNS1Q8NEH6 495 aa17.14■□□□□ 0.33
COL9A2-202ENST00000372748 UTP14AQ9BVJ6 771 aaKnown RBP17.14■□□□□ 0.33
COL9A2-202ENST00000372748 TMEM94Q12767 1356 aa17.14■□□□□ 0.33
COL9A2-202ENST00000372748 A0A1W2PQ27 194 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms