RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 TTLL6Q8N841 843 aa22.2■■□□□ 1.14
VEGFA-206ENST00000372077 MED23Q9ULK4 1368 aa22.2■■□□□ 1.14
VEGFA-206ENST00000372077 SGSM2O43147 1006 aa22.2■■□□□ 1.14
VEGFA-206ENST00000372077 CD2APQ9Y5K6 639 aa22.2■■□□□ 1.14
VEGFA-206ENST00000372077 CC2D2BQ6DHV5 1058 aa22.19■■□□□ 1.14
VEGFA-206ENST00000372077 RUFY2Q8WXA3 655 aa22.19■■□□□ 1.14
VEGFA-206ENST00000372077 IL25Q9H293 177 aa22.19■■□□□ 1.14
VEGFA-206ENST00000372077 DENND2AQ9ULE3 1009 aa22.19■■□□□ 1.14
VEGFA-206ENST00000372077 PDS5AQ29RF7 1337 aaKnown RBP22.19■■□□□ 1.14
VEGFA-206ENST00000372077 HSCBQ8IWL3 235 aa22.19■■□□□ 1.14
VEGFA-206ENST00000372077 GPR101Q96P66 508 aaPredicted RBP22.19■■□□□ 1.14
VEGFA-206ENST00000372077 SNED1Q8TER0 1413 aa22.19■■□□□ 1.14
VEGFA-206ENST00000372077 NMIQ13287 307 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-206ENST00000372077 CWC27Q6UX04 472 aaKnown RBP22.18■■□□□ 1.14
VEGFA-206ENST00000372077 DPP8Q6V1X1 898 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-206ENST00000372077 PIH1D3Q9NQM4 214 aaKnown RBP22.18■■□□□ 1.14
VEGFA-206ENST00000372077 COL1A1P02452 1464 aaPredicted RBP22.18■■□□□ 1.14
VEGFA-206ENST00000372077 C6orf229H3BNL8 230 aa22.18■■□□□ 1.14
VEGFA-206ENST00000372077 ZNF804AQ7Z570 1209 aa22.17■■□□□ 1.14
VEGFA-206ENST00000372077 FAM227BQ96M60 508 aa22.17■■□□□ 1.14
VEGFA-206ENST00000372077 IQSEC3Q9UPP2 1182 aaPredicted RBP22.17■■□□□ 1.14
VEGFA-206ENST00000372077 REC8O95072 547 aa22.17■■□□□ 1.14
VEGFA-206ENST00000372077 TDRD7Q8NHU6 1098 aaKnown RBP22.17■■□□□ 1.14
VEGFA-206ENST00000372077 LRRFIP1Q32MZ4 808 aaKnown RBP22.16■■□□□ 1.14
VEGFA-206ENST00000372077 RAD50Q92878 1312 aa22.16■■□□□ 1.14
VEGFA-206ENST00000372077 RNF113AO15541 343 aaKnown RBP22.16■■□□□ 1.14
VEGFA-206ENST00000372077 RTFDC1Q9BY42 306 aaPredicted RBP22.16■■□□□ 1.14
VEGFA-206ENST00000372077 SPON1Q9HCB6 807 aa22.16■■□□□ 1.14
VEGFA-206ENST00000372077 DOCK2Q92608 1830 aa22.16■■□□□ 1.14
VEGFA-206ENST00000372077 A0A0D9SFI3 127 aa22.16■■□□□ 1.14
VEGFA-206ENST00000372077 USP26Q9BXU7 913 aa22.16■■□□□ 1.14
VEGFA-206ENST00000372077 CHGBP05060 677 aa22.15■■□□□ 1.14
VEGFA-206ENST00000372077 ZFYP08048 801 aaPredicted RBP22.15■■□□□ 1.14
VEGFA-206ENST00000372077 MCM4P33991 863 aa22.15■■□□□ 1.14
VEGFA-206ENST00000372077 GRIPAP1Q4V328 841 aa22.15■■□□□ 1.14
VEGFA-206ENST00000372077 PIM2Q9P1W9 311 aa22.15■■□□□ 1.14
VEGFA-206ENST00000372077 ZMYM1Q5SVZ6 1142 aa22.15■■□□□ 1.14
VEGFA-206ENST00000372077 CD209Q9NNX6 404 aa22.15■■□□□ 1.14
VEGFA-206ENST00000372077 EPB41L2O43491 1005 aaKnown RBP22.14■■□□□ 1.14
VEGFA-206ENST00000372077 IL1R1P14778 569 aa22.14■■□□□ 1.14
VEGFA-206ENST00000372077 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.14■■□□□ 1.131e-12■■■□□ 17.3
VEGFA-206ENST00000372077 ZNF219Q9P2Y4 722 aaPredicted RBP22.14■■□□□ 1.13
VEGFA-206ENST00000372077 MYO5AQ9Y4I1 1855 aaKnown RBP22.13■■□□□ 1.13
VEGFA-206ENST00000372077 C21orf2O43822 256 aa22.13■■□□□ 1.13
VEGFA-206ENST00000372077 ZSCAN25Q6NSZ9 544 aa22.13■■□□□ 1.13
VEGFA-206ENST00000372077 EYA3Q99504 573 aa22.13■■□□□ 1.13
VEGFA-206ENST00000372077 HELLSQ9NRZ9 838 aa22.13■■□□□ 1.13
VEGFA-206ENST00000372077 MYH7P12883 1935 aa22.13■■□□□ 1.13
VEGFA-206ENST00000372077 MYH13Q9UKX3 1938 aa22.13■■□□□ 1.13
VEGFA-206ENST00000372077 BRCA1P38398 1863 aaKnown RBP22.13■■□□□ 1.13
VEGFA-206ENST00000372077 ADD2P35612 726 aa22.12■■□□□ 1.13
VEGFA-206ENST00000372077 RBM25P49756 843 aaKnown RBP22.12■■□□□ 1.13
VEGFA-206ENST00000372077 ZC3H12CQ9C0D7 883 aaKnown RBP22.12■■□□□ 1.13
VEGFA-206ENST00000372077 WASHC4Q2M389 1173 aa22.12■■□□□ 1.13
VEGFA-206ENST00000372077 SLFNL1Q499Z3 407 aa22.12■■□□□ 1.13
VEGFA-206ENST00000372077 MCMDC2Q4G0Z9 681 aa22.12■■□□□ 1.13
VEGFA-206ENST00000372077 COA1Q9GZY4 146 aa22.12■■□□□ 1.13
VEGFA-206ENST00000372077 LSG1Q9H089 658 aaKnown RBP22.12■■□□□ 1.13
VEGFA-206ENST00000372077 IDH1O75874 414 aaKnown RBP22.11■■□□□ 1.13
VEGFA-206ENST00000372077 UBE3CQ15386 1083 aa22.11■■□□□ 1.13
VEGFA-206ENST00000372077 CCDC93Q567U6 631 aa22.11■■□□□ 1.13
VEGFA-206ENST00000372077 PPP1R1BQ9UD71 204 aaPredicted RBP22.11■■□□□ 1.13
VEGFA-206ENST00000372077 TRAK2O60296 914 aa22.11■■□□□ 1.13
VEGFA-206ENST00000372077 MAP3K12Q12852 859 aa22.11■■□□□ 1.13
VEGFA-206ENST00000372077 SEC62Q99442 399 aaKnown RBP22.11■■□□□ 1.13
VEGFA-206ENST00000372077 ANO2Q9NQ90 1003 aa22.11■■□□□ 1.13
VEGFA-206ENST00000372077 RIMBP2O15034 1052 aa22.1■■□□□ 1.13
VEGFA-206ENST00000372077 APPBP2Q92624 585 aa22.1■■□□□ 1.13
VEGFA-206ENST00000372077 WWC3Q9ULE0 1092 aa22.1■■□□□ 1.13
VEGFA-206ENST00000372077 SALL1Q9NSC2 1324 aa22.1■■□□□ 1.13
VEGFA-206ENST00000372077 SLC9C2Q5TAH2 1124 aa22.1■■□□□ 1.13
VEGFA-206ENST00000372077 RTKN2Q8IZC4 609 aa22.1■■□□□ 1.13
VEGFA-206ENST00000372077 TCRBV5S4A2TA0A5A2 114 aa22.09■■□□□ 1.13
VEGFA-206ENST00000372077 PDE6AP16499 860 aa22.09■■□□□ 1.13
VEGFA-206ENST00000372077 DALRD3Q5D0E6 543 aaKnown RBP22.09■■□□□ 1.13
VEGFA-206ENST00000372077 ZNF589Q86UQ0 364 aaPredicted RBP22.09■■□□□ 1.13
VEGFA-206ENST00000372077 SUPT20HQ8NEM7 779 aa22.09■■□□□ 1.13
VEGFA-206ENST00000372077 OSBP2Q969R2 916 aa22.09■■□□□ 1.13
VEGFA-206ENST00000372077 SOGA3Q5TF21 947 aa22.09■■□□□ 1.13
VEGFA-206ENST00000372077 WDR66Q8TBY9 1149 aa22.09■■□□□ 1.13
VEGFA-206ENST00000372077 LRP2BPQ9P2M1 347 aa22.09■■□□□ 1.13
VEGFA-206ENST00000372077 CHAF1AQ13111 956 aaPredicted RBP22.08■■□□□ 1.13
VEGFA-206ENST00000372077 FOXD4L5Q5VV16 416 aaPredicted RBP22.08■■□□□ 1.13
VEGFA-206ENST00000372077 KIAA1211Q6ZU35 1233 aa22.08■■□□□ 1.13
VEGFA-206ENST00000372077 FOXD4L4Q8WXT5 416 aaPredicted RBP22.08■■□□□ 1.13
VEGFA-206ENST00000372077 CHMP5Q9NZZ3 219 aa22.08■■□□□ 1.13
VEGFA-206ENST00000372077 IGSF3O75054 1194 aa22.08■■□□□ 1.13
VEGFA-206ENST00000372077 KLHL34Q8N239 644 aa22.08■■□□□ 1.13
VEGFA-206ENST00000372077 CHAMP1Q96JM3 812 aa22.08■■□□□ 1.13
VEGFA-206ENST00000372077 PSMD1Q99460 953 aa22.08■■□□□ 1.13
VEGFA-206ENST00000372077 ABCF2Q9UG63 623 aa22.08■■□□□ 1.13
VEGFA-206ENST00000372077 MAST3O60307 1309 aa22.08■■□□□ 1.12
VEGFA-206ENST00000372077 XRCC6P12956 609 aaKnown RBP eCLIP22.07■■□□□ 1.127e-11■□□□□ 8.3
VEGFA-206ENST00000372077 FAM205AQ6ZU69 1335 aa22.07■■□□□ 1.12
VEGFA-206ENST00000372077 ZNF532Q9HCE3 1301 aa22.07■■□□□ 1.12
VEGFA-206ENST00000372077 CCDC171Q6TFL3 1326 aa22.07■■□□□ 1.12
VEGFA-206ENST00000372077 PTH1RQ03431 593 aa22.07■■□□□ 1.12
VEGFA-206ENST00000372077 M0R2C6 588 aa22.06■■□□□ 1.12
VEGFA-206ENST00000372077 CCDC129Q6ZRS4 1044 aa22.06■■□□□ 1.12
VEGFA-206ENST00000372077 ZGPATQ8N5A5 531 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms