RNA–Protein interactions for RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 DDR1Q08345 913 aa33.64■■■□□ 2.98
SDCCAG3-204ENST00000371725 CCDC102BQ68D86 513 aa33.64■■■□□ 2.98
SDCCAG3-204ENST00000371725 CCDC129Q6ZRS4 1044 aa33.64■■■□□ 2.98
SDCCAG3-204ENST00000371725 RUFY3Q7L099 469 aa33.64■■■□□ 2.98
SDCCAG3-204ENST00000371725 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.64■■■□□ 2.98
SDCCAG3-204ENST00000371725 FAM184AQ8NB25 1140 aa33.63■■■□□ 2.97
SDCCAG3-204ENST00000371725 KCNB2Q92953 911 aa33.63■■■□□ 2.97
SDCCAG3-204ENST00000371725 MED23Q9ULK4 1368 aa33.63■■■□□ 2.97
SDCCAG3-204ENST00000371725 SERPINB2P05120 415 aa33.62■■■□□ 2.97
SDCCAG3-204ENST00000371725 UVSSAQ2YD98 709 aa33.62■■■□□ 2.97
SDCCAG3-204ENST00000371725 BSDC1Q9NW68 430 aaPredicted RBP33.62■■■□□ 2.97
SDCCAG3-204ENST00000371725 CSPP1Q1MSJ5 1256 aa33.61■■■□□ 2.97
SDCCAG3-204ENST00000371725 GDPD2Q9HCC8 539 aa33.61■■■□□ 2.97
SDCCAG3-204ENST00000371725 MINPP1Q9UNW1 487 aa33.61■■■□□ 2.97
SDCCAG3-204ENST00000371725 MYO5AQ9Y4I1 1855 aaKnown RBP33.61■■■□□ 2.97
SDCCAG3-204ENST00000371725 CCDC171Q6TFL3 1326 aa33.61■■■□□ 2.97
SDCCAG3-204ENST00000371725 SLC5A1P13866 664 aa33.61■■■□□ 2.97
SDCCAG3-204ENST00000371725 RNF214Q8ND24 703 aa33.61■■■□□ 2.97
SDCCAG3-204ENST00000371725 TM6SF1Q9BZW5 370 aa33.61■■■□□ 2.97
SDCCAG3-204ENST00000371725 LETM1O95202 739 aaPredicted RBP33.6■■■□□ 2.97
SDCCAG3-204ENST00000371725 STX6O43752 255 aa33.59■■■□□ 2.97
SDCCAG3-204ENST00000371725 RPS8P62241 208 aaKnown RBP33.59■■■□□ 2.97
SDCCAG3-204ENST00000371725 EN1Q05925 392 aaPredicted RBP33.59■■■□□ 2.97
SDCCAG3-204ENST00000371725 EZH2Q15910 746 aaKnown RBP33.59■■■□□ 2.97
SDCCAG3-204ENST00000371725 ATP6V1DQ9Y5K8 247 aa33.59■■■□□ 2.97
SDCCAG3-204ENST00000371725 RFX7Q2KHR2 1363 aa33.58■■■□□ 2.97
SDCCAG3-204ENST00000371725 SYT1P21579 422 aa33.58■■■□□ 2.97
SDCCAG3-204ENST00000371725 CCDC183Q5T5S1 534 aa33.58■■■□□ 2.97
SDCCAG3-204ENST00000371725 BCAMP50895 628 aa33.58■■■□□ 2.97
SDCCAG3-204ENST00000371725 VPS53Q5VIR6 699 aa33.58■■■□□ 2.97
SDCCAG3-204ENST00000371725 POLRMTO00411 1230 aaKnown RBP33.57■■■□□ 2.96
SDCCAG3-204ENST00000371725 SMC3Q9UQE7 1217 aa33.57■■■□□ 2.96
SDCCAG3-204ENST00000371725 UBE2HP62256 183 aa33.56■■■□□ 2.96
SDCCAG3-204ENST00000371725 PRPF40BQ6NWY9 871 aaKnown RBP33.56■■■□□ 2.96
SDCCAG3-204ENST00000371725 ZSCAN31Q96LW9 406 aaPredicted RBP33.56■■■□□ 2.96
SDCCAG3-204ENST00000371725 ARID4AP29374 1257 aaPredicted RBP33.56■■■□□ 2.96
SDCCAG3-204ENST00000371725 FOXD4L6Q3SYB3 417 aaPredicted RBP33.56■■■□□ 2.96
SDCCAG3-204ENST00000371725 FOXD4L3Q6VB84 417 aaPredicted RBP33.56■■■□□ 2.96
SDCCAG3-204ENST00000371725 RBM8AQ9Y5S9 174 aaKnown RBP33.55■■■□□ 2.96
SDCCAG3-204ENST00000371725 F13A1P00488 732 aa33.55■■■□□ 2.96
SDCCAG3-204ENST00000371725 CASTP20810 708 aaKnown RBP33.55■■■□□ 2.96
SDCCAG3-204ENST00000371725 ZSWIM6Q9HCJ5 1215 aa33.55■■■□□ 2.96
SDCCAG3-204ENST00000371725 CNPY2Q9Y2B0 182 aa33.55■■■□□ 2.96
SDCCAG3-204ENST00000371725 PNPLA7Q6ZV29 1317 aa33.54■■■□□ 2.96
SDCCAG3-204ENST00000371725 MAP4K1Q92918 833 aa33.54■■■□□ 2.96
SDCCAG3-204ENST00000371725 ZNF512BQ96KM6 892 aaPredicted RBP33.54■■■□□ 2.96
SDCCAG3-204ENST00000371725 SH2B1Q9NRF2 756 aaPredicted RBP33.54■■■□□ 2.96
SDCCAG3-204ENST00000371725 HMG20BQ9P0W2 317 aa33.54■■■□□ 2.96
SDCCAG3-204ENST00000371725 MCMDC2Q4G0Z9 681 aa33.53■■■□□ 2.96
SDCCAG3-204ENST00000371725 PIH1D3Q9NQM4 214 aaKnown RBP33.53■■■□□ 2.96
SDCCAG3-204ENST00000371725 RNF113AO15541 343 aaKnown RBP33.53■■■□□ 2.96
SDCCAG3-204ENST00000371725 RASGRF1Q13972 1273 aa33.53■■■□□ 2.96
SDCCAG3-204ENST00000371725 GLIPR1L2Q4G1C9 344 aa33.53■■■□□ 2.96
SDCCAG3-204ENST00000371725 IQSEC3Q9UPP2 1182 aaPredicted RBP33.53■■■□□ 2.96
SDCCAG3-204ENST00000371725 MSL1Q68DK7 614 aa33.52■■■□□ 2.96
SDCCAG3-204ENST00000371725 RGPD3A6NKT7 1758 aaPredicted RBP33.52■■■□□ 2.96
SDCCAG3-204ENST00000371725 RGPD4Q7Z3J3 1758 aa33.52■■■□□ 2.96
SDCCAG3-204ENST00000371725 KLRK1P26718 216 aa33.52■■■□□ 2.96
SDCCAG3-204ENST00000371725 GYG1P46976 350 aa33.52■■■□□ 2.96
SDCCAG3-204ENST00000371725 NECTIN1Q15223 517 aa33.52■■■□□ 2.96
SDCCAG3-204ENST00000371725 ZMYM1Q5SVZ6 1142 aa33.52■■■□□ 2.96
SDCCAG3-204ENST00000371725 PDRG1Q9NUG6 133 aa33.52■■■□□ 2.96
SDCCAG3-204ENST00000371725 MYH7P12883 1935 aa33.51■■■□□ 2.96
SDCCAG3-204ENST00000371725 ST5P78524 1137 aa33.51■■■□□ 2.95
SDCCAG3-204ENST00000371725 CAMKK2Q96RR4 588 aa33.51■■■□□ 2.95
SDCCAG3-204ENST00000371725 M0R2C6 588 aa33.5■■■□□ 2.95
SDCCAG3-204ENST00000371725 KCNJ4P48050 445 aa33.5■■■□□ 2.95
SDCCAG3-204ENST00000371725 TAF6LQ9Y6J9 622 aa33.5■■■□□ 2.95
SDCCAG3-204ENST00000371725 UQCRFS1P1P0C7P4 283 aa33.5■■■□□ 2.95
SDCCAG3-204ENST00000371725 TCHHQ07283 1943 aa33.5■■■□□ 2.95
SDCCAG3-204ENST00000371725 MAST3O60307 1309 aa33.49■■■□□ 2.95
SDCCAG3-204ENST00000371725 SPATA5Q8NB90 893 aa33.49■■■□□ 2.95
SDCCAG3-204ENST00000371725 OSBP2Q969R2 916 aa33.49■■■□□ 2.95
SDCCAG3-204ENST00000371725 R3HCC1Q9Y3T6 440 aaKnown RBP33.49■■■□□ 2.95
SDCCAG3-204ENST00000371725 CYP46A1Q9Y6A2 500 aa33.49■■■□□ 2.95
SDCCAG3-204ENST00000371725 ADCK5Q3MIX3 580 aa33.49■■■□□ 2.95
SDCCAG3-204ENST00000371725 PDIA4P13667 645 aaKnown RBP33.48■■■□□ 2.95
SDCCAG3-204ENST00000371725 CPA1P15085 419 aa33.48■■■□□ 2.95
SDCCAG3-204ENST00000371725 CREB3L3Q68CJ9 461 aa33.48■■■□□ 2.95
SDCCAG3-204ENST00000371725 JAKMIP1Q96N16 626 aaKnown RBP33.48■■■□□ 2.95
SDCCAG3-204ENST00000371725 PDCL3Q9H2J4 239 aa33.47■■■□□ 2.95
SDCCAG3-204ENST00000371725 LARGE1O95461 756 aa33.47■■■□□ 2.95
SDCCAG3-204ENST00000371725 GRAPQ13588 217 aa33.47■■■□□ 2.95
SDCCAG3-204ENST00000371725 COL9A3Q14050 684 aaPredicted RBP33.47■■■□□ 2.95
SDCCAG3-204ENST00000371725 GRAPLQ8TC17 118 aaPredicted RBP33.47■■■□□ 2.95
SDCCAG3-204ENST00000371725 HELLSQ9NRZ9 838 aa33.47■■■□□ 2.95
SDCCAG3-204ENST00000371725 HMGB2P26583 209 aaKnown RBP33.46■■■□□ 2.95
SDCCAG3-204ENST00000371725 UBE4AQ14139 1066 aa33.46■■■□□ 2.95
SDCCAG3-204ENST00000371725 LARP6Q9BRS8 491 aaKnown RBP33.46■■■□□ 2.95
SDCCAG3-204ENST00000371725 MTMR6Q9Y217 621 aa33.46■■■□□ 2.95
SDCCAG3-204ENST00000371725 SLC27A2O14975 620 aa33.46■■■□□ 2.95
SDCCAG3-204ENST00000371725 IDH1O75874 414 aaKnown RBP33.46■■■□□ 2.95
SDCCAG3-204ENST00000371725 GJB2P29033 226 aa33.46■■■□□ 2.95
SDCCAG3-204ENST00000371725 WASHC4Q2M389 1173 aa33.46■■■□□ 2.95
SDCCAG3-204ENST00000371725 RPGRQ92834 1020 aaKnown RBP33.46■■■□□ 2.95
SDCCAG3-204ENST00000371725 CRY2Q49AN0 593 aa33.45■■■□□ 2.95
SDCCAG3-204ENST00000371725 DEFB132Q7Z7B7 95 aa33.45■■■□□ 2.95
SDCCAG3-204ENST00000371725 NLGN1Q8N2Q7 840 aa33.45■■■□□ 2.95
SDCCAG3-204ENST00000371725 ANKRD31Q8N7Z5 1873 aa33.45■■■□□ 2.94
SDCCAG3-204ENST00000371725 PTMAP06454 111 aaKnown RBP33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms