RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 FAM84BQ96KN1 310 aaPredicted RBP20.96■□□□□ 0.95
SSBP3-203ENST00000371319 PDRG1Q9NUG6 133 aa20.96■□□□□ 0.95
SSBP3-203ENST00000371319 ZNF532Q9HCE3 1301 aa20.95■□□□□ 0.95
SSBP3-203ENST00000371319 IRS2Q9Y4H2 1338 aa20.95■□□□□ 0.95
SSBP3-203ENST00000371319 KLRG2A4D1S0 409 aaPredicted RBP20.95■□□□□ 0.94
SSBP3-203ENST00000371319 SLC51AQ86UW1 340 aa20.95■□□□□ 0.94
SSBP3-203ENST00000371319 NLGN1Q8N2Q7 840 aa20.95■□□□□ 0.94
SSBP3-203ENST00000371319 RPGRQ92834 1020 aaKnown RBP20.95■□□□□ 0.94
SSBP3-203ENST00000371319 MYH13Q9UKX3 1938 aa20.95■□□□□ 0.94
SSBP3-203ENST00000371319 KRT32Q14532 448 aa20.94■□□□□ 0.94
SSBP3-203ENST00000371319 CAVIN4Q5BKX8 364 aa20.94■□□□□ 0.94
SSBP3-203ENST00000371319 ZGPATQ8N5A5 531 aaKnown RBP20.94■□□□□ 0.94
SSBP3-203ENST00000371319 CAMKK2Q96RR4 588 aa20.94■□□□□ 0.94
SSBP3-203ENST00000371319 GNL3LQ9NVN8 582 aaKnown RBP20.94■□□□□ 0.94
SSBP3-203ENST00000371319 QSER1Q2KHR3 1735 aa20.94■□□□□ 0.94
SSBP3-203ENST00000371319 GPAA1O43292 621 aa20.93■□□□□ 0.94
SSBP3-203ENST00000371319 HOXA10P31260 410 aaPredicted RBP20.93■□□□□ 0.94
SSBP3-203ENST00000371319 RBM17Q96I25 401 aaKnown RBP20.93■□□□□ 0.94
SSBP3-203ENST00000371319 LRRC37AA6NMS7 1700 aa20.93■□□□□ 0.94
SSBP3-203ENST00000371319 A0A0G2JLW4 131 aa20.93■□□□□ 0.94
SSBP3-203ENST00000371319 FRAT2O75474 233 aaPredicted RBP20.93■□□□□ 0.94
SSBP3-203ENST00000371319 RPS6KB1P23443 525 aa20.93■□□□□ 0.94
SSBP3-203ENST00000371319 EZH2Q15910 746 aaKnown RBP20.93■□□□□ 0.94
SSBP3-203ENST00000371319 BLOC1S2Q6QNY1 142 aa20.93■□□□□ 0.94
SSBP3-203ENST00000371319 ALDH8A1Q9H2A2 487 aaPredicted RBP20.93■□□□□ 0.94
SSBP3-203ENST00000371319 CWC22Q9HCG8 908 aaKnown RBP20.93■□□□□ 0.94
SSBP3-203ENST00000371319 IQSEC3Q9UPP2 1182 aaPredicted RBP20.93■□□□□ 0.94
SSBP3-203ENST00000371319 MAP3K12Q12852 859 aa20.92■□□□□ 0.94
SSBP3-203ENST00000371319 RAB3GAP1Q15042 981 aa20.92■□□□□ 0.94
SSBP3-203ENST00000371319 STOX1Q6ZVD7 989 aa20.92■□□□□ 0.94
SSBP3-203ENST00000371319 MAGEB6Q8N7X4 407 aa20.92■□□□□ 0.94
SSBP3-203ENST00000371319 LIMCH1Q9UPQ0 1083 aa20.92■□□□□ 0.94
SSBP3-203ENST00000371319 ZBTB22O15209 634 aa20.91■□□□□ 0.94
SSBP3-203ENST00000371319 EN1Q05925 392 aaPredicted RBP20.91■□□□□ 0.94
SSBP3-203ENST00000371319 INTS4Q96HW7 963 aaKnown RBP20.91■□□□□ 0.94
SSBP3-203ENST00000371319 ANO8Q9HCE9 1232 aaPredicted RBP20.91■□□□□ 0.94
SSBP3-203ENST00000371319 DENND2AQ9ULE3 1009 aa20.91■□□□□ 0.94
SSBP3-203ENST00000371319 SEMA3EO15041 775 aa20.9■□□□□ 0.94
SSBP3-203ENST00000371319 TTLL5Q6EMB2 1281 aa20.9■□□□□ 0.94
SSBP3-203ENST00000371319 VPS37DQ86XT2 251 aa20.9■□□□□ 0.94
SSBP3-203ENST00000371319 NEK1Q96PY6 1258 aa20.9■□□□□ 0.94
SSBP3-203ENST00000371319 CRAMP1Q96RY5 1269 aa20.9■□□□□ 0.94
SSBP3-203ENST00000371319 LARP6Q9BRS8 491 aaKnown RBP20.9■□□□□ 0.94
SSBP3-203ENST00000371319 LEMD3Q9Y2U8 911 aa20.9■□□□□ 0.94
SSBP3-203ENST00000371319 PDS5AQ29RF7 1337 aaKnown RBP20.9■□□□□ 0.94
SSBP3-203ENST00000371319 CACNA1SQ13698 1873 aa20.9■□□□□ 0.94
SSBP3-203ENST00000371319 HIBADHP31937 336 aaKnown RBP20.89■□□□□ 0.94
SSBP3-203ENST00000371319 TXNRD3Q86VQ6 643 aa20.89■□□□□ 0.94
SSBP3-203ENST00000371319 XDHP47989 1333 aa20.89■□□□□ 0.94
SSBP3-203ENST00000371319 COL11A2P13942 1736 aaPredicted RBP20.89■□□□□ 0.93
SSBP3-203ENST00000371319 LARGE1O95461 756 aa20.89■□□□□ 0.93
SSBP3-203ENST00000371319 MMP10P09238 476 aa20.89■□□□□ 0.93
SSBP3-203ENST00000371319 GPSM2P81274 684 aa20.89■□□□□ 0.93
SSBP3-203ENST00000371319 STRBPQ96SI9 672 aaKnown RBP20.89■□□□□ 0.93
SSBP3-203ENST00000371319 BRIP1Q9BX63 1249 aa20.89■□□□□ 0.93
SSBP3-203ENST00000371319 CTNNA3Q9UI47 895 aa20.89■□□□□ 0.93
SSBP3-203ENST00000371319 LTBP1Q14766 1721 aa20.88■□□□□ 0.93
SSBP3-203ENST00000371319 BBOX1O75936 387 aa20.88■□□□□ 0.93
SSBP3-203ENST00000371319 FGAP02671 866 aa20.88■□□□□ 0.93
SSBP3-203ENST00000371319 ANKIB1Q9P2G1 1089 aa20.88■□□□□ 0.93
SSBP3-203ENST00000371319 TOB2Q14106 344 aaPredicted RBP20.87■□□□□ 0.93
SSBP3-203ENST00000371319 SLC15A2Q16348 729 aa20.87■□□□□ 0.93
SSBP3-203ENST00000371319 MSL1Q68DK7 614 aa20.87■□□□□ 0.93
SSBP3-203ENST00000371319 C15orf52Q6ZUT6 534 aaKnown RBP20.87■□□□□ 0.93
SSBP3-203ENST00000371319 TNPO1Q92973 898 aaKnown RBP20.87■□□□□ 0.93
SSBP3-203ENST00000371319 ZSCAN31Q96LW9 406 aaPredicted RBP20.87■□□□□ 0.93
SSBP3-203ENST00000371319 TCEANC2Q96MN5 208 aa20.87■□□□□ 0.93
SSBP3-203ENST00000371319 LRP2BPQ9P2M1 347 aa20.87■□□□□ 0.93
SSBP3-203ENST00000371319 MAST2Q6P0Q8 1798 aa20.86■□□□□ 0.93
SSBP3-203ENST00000371319 E7EWF7 191 aa20.86■□□□□ 0.93
SSBP3-203ENST00000371319 TPCN1Q9ULQ1 816 aa20.86■□□□□ 0.93
SSBP3-203ENST00000371319 PARP3Q9Y6F1 533 aa20.86■□□□□ 0.93
SSBP3-203ENST00000371319 MBD4O95243 580 aa20.85■□□□□ 0.93
SSBP3-203ENST00000371319 ANKRD1Q15327 319 aa20.85■□□□□ 0.93
SSBP3-203ENST00000371319 AIDAQ96BJ3 306 aa20.85■□□□□ 0.93
SSBP3-203ENST00000371319 SH2B1Q9NRF2 756 aaPredicted RBP20.85■□□□□ 0.93
SSBP3-203ENST00000371319 STK32BQ9NY57 414 aa20.85■□□□□ 0.93
SSBP3-203ENST00000371319 ATP2B4P23634 1241 aa20.85■□□□□ 0.93
SSBP3-203ENST00000371319 NUCB2P80303 420 aa20.85■□□□□ 0.93
SSBP3-203ENST00000371319 ST3GAL1Q11201 340 aa20.85■□□□□ 0.93
SSBP3-203ENST00000371319 IMMTQ16891 758 aaKnown RBP20.85■□□□□ 0.93
SSBP3-203ENST00000371319 ABCF2Q9UG63 623 aa20.85■□□□□ 0.93
SSBP3-203ENST00000371319 HMGB1P09429 215 aaKnown RBP20.84■□□□□ 0.93
SSBP3-203ENST00000371319 EXOSC10Q01780 885 aaKnown RBP20.84■□□□□ 0.93
SSBP3-203ENST00000371319 PKP1Q13835 747 aa20.84■□□□□ 0.93
SSBP3-203ENST00000371319 ALX1Q15699 326 aa20.84■□□□□ 0.93
SSBP3-203ENST00000371319 ME3Q16798 604 aa20.84■□□□□ 0.93
SSBP3-203ENST00000371319 ARMT1Q9H993 441 aa20.84■□□□□ 0.93
SSBP3-203ENST00000371319 PODXL2Q9NZ53 605 aa20.84■□□□□ 0.93
SSBP3-203ENST00000371319 RAI14Q9P0K7 980 aa20.84■□□□□ 0.93
SSBP3-203ENST00000371319 ZMYM6O95789 1325 aa20.83■□□□□ 0.93
SSBP3-203ENST00000371319 SRGNP10124 158 aa20.83■□□□□ 0.92
SSBP3-203ENST00000371319 CYP7A1P22680 504 aa20.83■□□□□ 0.92
SSBP3-203ENST00000371319 DHX32Q7L7V1 743 aaKnown RBP20.83■□□□□ 0.92
SSBP3-203ENST00000371319 TMC4Q7Z404 712 aa20.83■□□□□ 0.92
SSBP3-203ENST00000371319 ADGRA1Q86SQ6 560 aa20.83■□□□□ 0.92
SSBP3-203ENST00000371319 LCORLQ8N3X6 602 aa20.83■□□□□ 0.92
SSBP3-203ENST00000371319 KIAA1551Q9HCM1 1747 aa20.82■□□□□ 0.92
SSBP3-203ENST00000371319 PATL2C9JE40 543 aaKnown RBP20.82■□□□□ 0.92
SSBP3-203ENST00000371319 PPEF1O14829 653 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms