RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 SUGP1Q8IWZ8 645 aaKnown RBP10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 CHPF2Q9P2E5 772 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 ATP6V1DQ9Y5K8 247 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 CCDC172P0C7W6 258 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 APOBRQ0VD83 1088 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 TOGARAM2Q6ZUX3 1019 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 DDX46Q7L014 1031 aaKnown RBP10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 DHX58Q96C10 678 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 ZSWIM4Q9H7M6 989 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 CEP83Q9Y592 693 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 NRKQ7Z2Y5 1582 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 POLR3DP05423 398 aaPredicted RBP10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 SWT1Q5T5J6 900 aaKnown RBP10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 CPLX1O14810 134 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 CTDNEP1O95476 244 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 CCDC129Q6ZRS4 1044 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 BICC1Q9H694 974 aaKnown RBP10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 CYP46A1Q9Y6A2 500 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 ACEP12821 1306 aa10.12□□□□□ -0.79
SMARCA1-203ENST00000371123 LRRIQ3A6PVS8 624 aaPredicted RBP10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 BTBD11A6QL63 1104 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 NBPF7P0C2Y1 421 aaPredicted RBP10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 WASLO00401 505 aaPredicted RBP10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 ATP8B1O43520 1251 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 CHRNA2Q15822 529 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 OTUD7BQ6GQQ9 843 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 SUFUQ9UMX1 484 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 BRD2P25440 801 aaKnown RBP10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 ITSN1Q15811 1721 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 LRRFIP1Q32MZ4 808 aaKnown RBP10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 FBXW10Q5XX13 1052 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 CREB3L3Q68CJ9 461 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 TTC41PQ6P2S7 1318 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 CCAR1Q8IX12 1150 aaKnown RBP10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 BANK1Q8NDB2 785 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 CABLES1Q8TDN4 633 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 USP28Q96RU2 1077 aa10.11□□□□□ -0.79
SMARCA1-203ENST00000371123 EPB41L2O43491 1005 aaKnown RBP10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 RXRAP19793 462 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 HDGFP51858 240 aaKnown RBP10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 NEXNQ0ZGT2 675 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 POLA2Q14181 598 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 MTF1Q14872 753 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 STX1AQ16623 288 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 TEX35Q5T0J7 233 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 GPIHBP1Q8IV16 184 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 SSH3Q8TE77 659 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 UTP14AQ9BVJ6 771 aaKnown RBP10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 DONSONQ9NYP3 566 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 L1RE1Q9UN81 338 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 SRCAPQ6ZRS2 3230 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 GIGYF1O75420 1035 aaPredicted RBP10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 FMR1NBQ8N0W7 255 aaPredicted RBP10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 BRF1Q92994 677 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 MRPL44Q9H9J2 332 aaKnown RBP10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 LGR6Q9HBX8 967 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 AOX1Q06278 1338 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 A0A0G2JLW4 131 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 EXOC5O00471 708 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 SLC27A2O14975 620 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 SYF2O95926 243 aaKnown RBP10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 KCNJ6P48051 423 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 RASSF8Q8NHQ8 419 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 RBM8AQ9Y5S9 174 aaKnown RBP10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 TOPAZ1Q8N9V7 1692 aa10.1□□□□□ -0.79
SMARCA1-203ENST00000371123 RAD21O60216 631 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 PHACTR2O75167 634 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 SCP2P22307 547 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 BLOC1S2Q6QNY1 142 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 ZNF589Q86UQ0 364 aaPredicted RBP10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 TTC5Q8N0Z6 440 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 CNPY4Q8N129 248 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 RHPN1Q8TCX5 695 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 SCAND2PQ9GZW5 306 aaPredicted RBP10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 ABCB6Q9NP58 842 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 PRPF6O94906 941 aaKnown RBP10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 RUFY2Q8WXA3 655 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 RIN2Q8WYP3 895 aaPredicted RBP10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 TM6SF1Q9BZW5 370 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 FAM170AA1A519 330 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 MCM6Q14566 821 aa10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 CPLX2Q6PUV4 134 aaKnown RBP10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 GPR161Q8N6U8 529 aaKnown RBP10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 DDX17Q92841 729 aaKnown RBP10.09□□□□□ -0.79
SMARCA1-203ENST00000371123 A0A0D9SFI3 127 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 PRAMEF22A3QJZ6 481 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 CCT4P50991 539 aaKnown RBP10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 NDUFA8P51970 172 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 PPP2R3AQ06190 1150 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 NFXL1Q6ZNB6 911 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 MYD88Q99836 296 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 SH2B1Q9NRF2 756 aaPredicted RBP10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 RCOR1Q9UKL0 485 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 MAP3K2Q9Y2U5 619 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 MCTP2Q6DN12 878 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 CTR9Q6PD62 1173 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 MAP4K1Q92918 833 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 ZBTB3Q9H5J0 574 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 A0A1B0GVL5 298 aa10.08□□□□□ -0.8
SMARCA1-203ENST00000371123 GNAT3A8MTJ3 354 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms