RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 ATP2B4P23634 1241 aa11.92□□□□□ -0.5
GTF2B-201ENST00000370500 LMOD1P29536 600 aaPredicted RBP11.92□□□□□ -0.5
GTF2B-201ENST00000370500 LDHDQ86WU2 507 aa11.92□□□□□ -0.5
GTF2B-201ENST00000370500 GREM2Q9H772 168 aa11.92□□□□□ -0.5
GTF2B-201ENST00000370500 POLLQ9UGP5 575 aa11.92□□□□□ -0.5
GTF2B-201ENST00000370500 GGA1Q9UJY5 639 aa11.92□□□□□ -0.5
GTF2B-201ENST00000370500 GJA3Q9Y6H8 435 aa11.92□□□□□ -0.5
GTF2B-201ENST00000370500 LRRC37AA6NMS7 1700 aa11.91□□□□□ -0.5
GTF2B-201ENST00000370500 ANKRD18BA2A2Z9 1011 aa11.91□□□□□ -0.5
GTF2B-201ENST00000370500 ITGA6P23229 1130 aa11.91□□□□□ -0.5
GTF2B-201ENST00000370500 EPHX2P34913 555 aa11.91□□□□□ -0.5
GTF2B-201ENST00000370500 CXCL9Q07325 125 aa11.91□□□□□ -0.5
GTF2B-201ENST00000370500 CIAPIN1Q6FI81 312 aa11.91□□□□□ -0.5
GTF2B-201ENST00000370500 CCDC85AQ96PX6 553 aaPredicted RBP11.91□□□□□ -0.5
GTF2B-201ENST00000370500 MPHOSPH8Q99549 860 aa11.91□□□□□ -0.5
GTF2B-201ENST00000370500 ANKRD2Q9GZV1 360 aa11.91□□□□□ -0.5
GTF2B-201ENST00000370500 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
GTF2B-201ENST00000370500 MINPP1Q9UNW1 487 aa11.91□□□□□ -0.5
GTF2B-201ENST00000370500 UTYO14607 1347 aa11.9□□□□□ -0.5
GTF2B-201ENST00000370500 SCN4AP35499 1836 aa11.9□□□□□ -0.5
GTF2B-201ENST00000370500 FOXO4P98177 505 aa11.9□□□□□ -0.5
GTF2B-201ENST00000370500 IFIT5Q13325 482 aaKnown RBP11.9□□□□□ -0.5
GTF2B-201ENST00000370500 SLC51AQ86UW1 340 aa11.9□□□□□ -0.5
GTF2B-201ENST00000370500 LAPTM4BQ86VI4 370 aa11.9□□□□□ -0.5
GTF2B-201ENST00000370500 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
GTF2B-201ENST00000370500 UFL1O94874 794 aa11.89□□□□□ -0.51
GTF2B-201ENST00000370500 HNRNPUQ00839 825 aaKnown RBP eCLIP11.89□□□□□ -0.51
GTF2B-201ENST00000370500 CCDC57Q2TAC2 916 aa11.89□□□□□ -0.51
GTF2B-201ENST00000370500 PROX2Q3B8N5 592 aa11.89□□□□□ -0.51
GTF2B-201ENST00000370500 USP50Q70EL3 339 aaPredicted RBP11.89□□□□□ -0.51
GTF2B-201ENST00000370500 ARHGAP45Q92619 1136 aa11.89□□□□□ -0.51
GTF2B-201ENST00000370500 API5Q9BZZ5 524 aaKnown RBP11.89□□□□□ -0.51
GTF2B-201ENST00000370500 HDAC5Q9UQL6 1122 aa11.89□□□□□ -0.51
GTF2B-201ENST00000370500 COL4A5P29400 1685 aa11.89□□□□□ -0.51
GTF2B-201ENST00000370500 RPS12P25398 132 aaKnown RBP11.88□□□□□ -0.51
GTF2B-201ENST00000370500 CCT4P50991 539 aaKnown RBP11.88□□□□□ -0.51
GTF2B-201ENST00000370500 SCNN1DP51172 638 aa11.88□□□□□ -0.51
GTF2B-201ENST00000370500 FAM161AQ3B820 660 aa11.88□□□□□ -0.51
GTF2B-201ENST00000370500 LMBR1LQ6UX01 489 aa11.88□□□□□ -0.51
GTF2B-201ENST00000370500 PODNQ7Z5L7 613 aa11.88□□□□□ -0.51
GTF2B-201ENST00000370500 DPF2Q92785 391 aa11.88□□□□□ -0.51
GTF2B-201ENST00000370500 ADARB2Q9NS39 739 aaKnown RBP11.88□□□□□ -0.51
GTF2B-201ENST00000370500 GPRC5DQ9NZD1 345 aa11.88□□□□□ -0.51
GTF2B-201ENST00000370500 DUOX1Q9NRD9 1551 aa11.88□□□□□ -0.51
GTF2B-201ENST00000370500 YDJCA8MPS7 323 aa11.87□□□□□ -0.51
GTF2B-201ENST00000370500 IPO8O15397 1037 aaKnown RBP11.87□□□□□ -0.51
GTF2B-201ENST00000370500 RAD17O75943 681 aa11.87□□□□□ -0.51
GTF2B-201ENST00000370500 COL9A1P20849 921 aa11.87□□□□□ -0.51
GTF2B-201ENST00000370500 RARSP54136 660 aaKnown RBP11.87□□□□□ -0.51
GTF2B-201ENST00000370500 BCL2L13Q9BXK5 485 aa11.87□□□□□ -0.51
GTF2B-201ENST00000370500 IRX2Q9BZI1 471 aaPredicted RBP11.87□□□□□ -0.51
GTF2B-201ENST00000370500 KIF16BQ96L93 1317 aa11.87□□□□□ -0.51
GTF2B-201ENST00000370500 TAF1P21675 1872 aa11.87□□□□□ -0.51
GTF2B-201ENST00000370500 H7C1D1 291 aa11.86□□□□□ -0.51
GTF2B-201ENST00000370500 ECE2O60344 883 aa11.86□□□□□ -0.51
GTF2B-201ENST00000370500 NBPF7P0C2Y1 421 aaPredicted RBP11.86□□□□□ -0.51
GTF2B-201ENST00000370500 GMPSP49915 693 aaPredicted RBP11.86□□□□□ -0.51
GTF2B-201ENST00000370500 RABL6Q3YEC7 729 aaPredicted RBP11.86□□□□□ -0.51
GTF2B-201ENST00000370500 EAPPQ56P03 285 aaPredicted RBP11.86□□□□□ -0.51
GTF2B-201ENST00000370500 TAF7LQ5H9L4 462 aa11.86□□□□□ -0.51
GTF2B-201ENST00000370500 ZC3H15Q8WU90 426 aaKnown RBP11.86□□□□□ -0.51
GTF2B-201ENST00000370500 EPAS1Q99814 870 aa11.86□□□□□ -0.51
GTF2B-201ENST00000370500 DBNDD1Q9H9R9 158 aa11.86□□□□□ -0.51
GTF2B-201ENST00000370500 NOB1Q9ULX3 412 aaKnown RBP11.86□□□□□ -0.51
GTF2B-201ENST00000370500 CHMP3Q9Y3E7 222 aa11.86□□□□□ -0.51
GTF2B-201ENST00000370500 MYH3P11055 1940 aa11.86□□□□□ -0.51
GTF2B-201ENST00000370500 MED23Q9ULK4 1368 aa11.86□□□□□ -0.51
GTF2B-201ENST00000370500 LTBP1Q14766 1721 aa11.86□□□□□ -0.51
GTF2B-201ENST00000370500 VIL1P09327 827 aaKnown RBP11.85□□□□□ -0.51
GTF2B-201ENST00000370500 EPS15P42566 896 aa11.85□□□□□ -0.51
GTF2B-201ENST00000370500 MMP14P50281 582 aa11.85□□□□□ -0.51
GTF2B-201ENST00000370500 EPHA10Q5JZY3 1008 aa11.85□□□□□ -0.51
GTF2B-201ENST00000370500 LDHAL6AQ6ZMR3 332 aa11.85□□□□□ -0.51
GTF2B-201ENST00000370500 NYAP1Q6ZVC0 841 aa11.85□□□□□ -0.51
GTF2B-201ENST00000370500 COA1Q9GZY4 146 aa11.85□□□□□ -0.51
GTF2B-201ENST00000370500 USP44Q9H0E7 712 aa11.85□□□□□ -0.51
GTF2B-201ENST00000370500 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
GTF2B-201ENST00000370500 ZNF804BA4D1E1 1349 aa11.85□□□□□ -0.51
GTF2B-201ENST00000370500 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
GTF2B-201ENST00000370500 COL4A1P02462 1669 aa11.84□□□□□ -0.51
GTF2B-201ENST00000370500 PSMD14O00487 310 aa11.84□□□□□ -0.51
GTF2B-201ENST00000370500 ITGBL1O95965 494 aaPredicted RBP11.84□□□□□ -0.51
GTF2B-201ENST00000370500 CHRNDQ07001 517 aa11.84□□□□□ -0.51
GTF2B-201ENST00000370500 C15orf52Q6ZUT6 534 aaKnown RBP11.84□□□□□ -0.51
GTF2B-201ENST00000370500 CNTROBQ8N137 903 aa11.84□□□□□ -0.51
GTF2B-201ENST00000370500 KAZALD1Q96I82 304 aa11.84□□□□□ -0.51
GTF2B-201ENST00000370500 SUCLG2Q96I99 432 aa11.84□□□□□ -0.51
GTF2B-201ENST00000370500 PGAP2Q9UHJ9 254 aa11.84□□□□□ -0.51
GTF2B-201ENST00000370500 KCNJ4P48050 445 aa11.83□□□□□ -0.52
GTF2B-201ENST00000370500 DNAJC5GQ8N7S2 189 aa11.83□□□□□ -0.52
GTF2B-201ENST00000370500 AGBL3Q8NEM8 1001 aa11.83□□□□□ -0.52
GTF2B-201ENST00000370500 BICC1Q9H694 974 aaKnown RBP11.83□□□□□ -0.52
GTF2B-201ENST00000370500 CNNM1Q9NRU3 951 aa11.83□□□□□ -0.52
GTF2B-201ENST00000370500 PASKQ96RG2 1323 aa11.83□□□□□ -0.52
GTF2B-201ENST00000370500 ZNF609O15014 1411 aa11.83□□□□□ -0.52
GTF2B-201ENST00000370500 USP17L3A6NCW0 530 aa11.82□□□□□ -0.52
GTF2B-201ENST00000370500 USP17L4A6NCW7 530 aa11.82□□□□□ -0.52
GTF2B-201ENST00000370500 SOWAHBA6NEL2 793 aa11.82□□□□□ -0.52
GTF2B-201ENST00000370500 CAMK2BQ13554 666 aa11.82□□□□□ -0.52
GTF2B-201ENST00000370500 INTS3Q68E01 1043 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms