RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 ZFYP08048 801 aaPredicted RBP11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 SLC5A1P13866 664 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 VPS53Q5VIR6 699 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 LRSAM1Q6UWE0 723 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 ZNF512BQ96KM6 892 aaPredicted RBP11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 CDC5LQ99459 802 aaKnown RBP11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 NYXQ9GZU5 481 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 LIMCH1Q9UPQ0 1083 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 UQCRFS1P1P0C7P4 283 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 AK2P54819 239 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 KRT32Q14532 448 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 ADCK5Q3MIX3 580 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 CCDC129Q6ZRS4 1044 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 RUFY3Q7L099 469 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 DDX60Q8IY21 1712 aaKnown RBP11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 SBF2Q86WG5 1849 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 ERFEQ4G0M1 354 aa11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 HELBQ8NG08 1087 aaPredicted RBP11.8□□□□□ -0.52
PRPF38B-203ENST00000370025 LAMB2P55268 1798 aa11.79□□□□□ -0.52
PRPF38B-203ENST00000370025 ZAP70P43403 619 aa11.79□□□□□ -0.52
PRPF38B-203ENST00000370025 TBC1D9BQ66K14 1250 aa11.79□□□□□ -0.52
PRPF38B-203ENST00000370025 GTPBP4Q9BZE4 634 aaKnown RBP11.79□□□□□ -0.52
PRPF38B-203ENST00000370025 CHGBP05060 677 aa11.79□□□□□ -0.52
PRPF38B-203ENST00000370025 TTF1Q15361 905 aaPredicted RBP11.79□□□□□ -0.52
PRPF38B-203ENST00000370025 TSGA10IPQ3SY00 556 aa11.79□□□□□ -0.52
PRPF38B-203ENST00000370025 BLOC1S2Q6QNY1 142 aa11.79□□□□□ -0.52
PRPF38B-203ENST00000370025 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.79□□□□□ -0.52
PRPF38B-203ENST00000370025 LETM1O95202 739 aaPredicted RBP11.79□□□□□ -0.52
PRPF38B-203ENST00000370025 SRP68Q9UHB9 627 aaKnown RBP11.79□□□□□ -0.52
PRPF38B-203ENST00000370025 KIF20AO95235 890 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 CPA1P15085 419 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 FGFR2P21802 821 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 SCARF1Q14162 830 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 ZSCAN25Q6NSZ9 544 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 FAM196AQ6ZSG2 479 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 SMIM5Q71RC9 77 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 ZSCAN31Q96LW9 406 aaPredicted RBP11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 DSCC1Q9BVC3 393 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 LRP5O75197 1615 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 LY75O60449 1722 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 RFC4P35249 363 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 SF3B3Q15393 1217 aaKnown RBP11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 WASHC4Q2M389 1173 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 TRAPPC3LQ5T215 181 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 CCDC102BQ68D86 513 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 NBPF5PQ86XG9 351 aaPredicted RBP11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 ARHGEF1Q92888 912 aaKnown RBP11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 SCN7AQ01118 1682 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 MCAMP43121 646 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 NAA30Q147X3 362 aaPredicted RBP11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 SLC10A5Q5PT55 438 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 ANKRD18AQ8IVF6 992 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 ZBTB9Q96C00 473 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 TSPY26PQ9H489 355 aa11.78□□□□□ -0.52
PRPF38B-203ENST00000370025 ANKRD1Q15327 319 aa11.77□□□□□ -0.53
PRPF38B-203ENST00000370025 TPTE2Q6XPS3 522 aa11.77□□□□□ -0.53
PRPF38B-203ENST00000370025 RPAP1Q9BWH6 1393 aaPredicted RBP11.77□□□□□ -0.53
PRPF38B-203ENST00000370025 ARID4AP29374 1257 aaPredicted RBP11.77□□□□□ -0.53
PRPF38B-203ENST00000370025 SH2B1Q9NRF2 756 aaPredicted RBP11.77□□□□□ -0.53
PRPF38B-203ENST00000370025 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.77□□□□□ -0.53
PRPF38B-203ENST00000370025 TAF1LQ8IZX4 1826 aa11.77□□□□□ -0.53
PRPF38B-203ENST00000370025 MAST3O60307 1309 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 PHKA1P46020 1223 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 SLFNL1Q499Z3 407 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 KRT27Q7Z3Y8 459 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 NLRP3Q96P20 1036 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 NPHP1O15259 732 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 PI16Q6UXB8 463 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 CLEC17AQ6ZS10 378 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 APPBP2Q92624 585 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 CYP2E1P05181 493 aaPredicted RBP11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 RPS6KB1P23443 525 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 CHRNDQ07001 517 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 CHAF1AQ13111 956 aaPredicted RBP11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 NEK1Q96PY6 1258 aa11.76□□□□□ -0.53
PRPF38B-203ENST00000370025 PHF14O94880 888 aa11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 ADCY5O95622 1261 aa11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 HSPD1P10809 573 aaKnown RBP11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 HMGN5P82970 282 aaKnown RBP11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 OSBP2Q969R2 916 aa11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 AKAP11Q9UKA4 1901 aa11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 MCM5P33992 734 aa11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 ALDH8A1Q9H2A2 487 aaPredicted RBP11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 M0R2C6 588 aa11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 GADD45BO75293 160 aaPredicted RBP11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 CYP21A2P08686 494 aa11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 ADRA2BP18089 450 aa11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 BSDC1Q9NW68 430 aaPredicted RBP11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 CTNNA3Q9UI47 895 aa11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 ZDHHC9Q9Y397 364 aa11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 C4BP0C0L5 1744 aa11.75□□□□□ -0.53
PRPF38B-203ENST00000370025 IDH1O75874 414 aaKnown RBP11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 ZNF592Q92610 1267 aa11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 MYH7P12883 1935 aa11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 HMGB1P09429 215 aaKnown RBP11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
PRPF38B-203ENST00000370025 SLC9C2Q5TAH2 1124 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms