RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 TCP11Q8WWU5 503 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 SH2D4AQ9H788 454 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 ARHGEF11O15085 1522 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 BCAR3O75815 825 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 TMPOP42166 694 aaKnown RBP11.36□□□□□ -0.59
SIM1-202ENST00000369208 SEPT2Q15019 361 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 ARMC9Q7Z3E5 817 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 C8orf76Q96K31 380 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 C8orf37Q96NL8 207 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 ATP5DP30049 168 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 NOP2P46087 812 aaKnown RBP11.36□□□□□ -0.59
SIM1-202ENST00000369208 RWDD2BP57060 319 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 CCDC82Q8N4S0 544 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 IFIT3O14879 490 aaKnown RBP11.36□□□□□ -0.59
SIM1-202ENST00000369208 LDHAL6AQ6ZMR3 332 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 PLVAPQ9BX97 442 aa11.36□□□□□ -0.59
SIM1-202ENST00000369208 CHUKO15111 745 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 TBCAO75347 108 aaKnown RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 IFI16Q16666 785 aaKnown RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 BICD1Q96G01 975 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 SMC6Q96SB8 1091 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 STK32BQ9NY57 414 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 IMPACTQ9P2X3 320 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 VAV2P52735 878 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 NKTRP30414 1462 aaKnown RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 ZNF165P49910 485 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 CKAP2LQ8IYA6 745 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 CTNNBL1Q8WYA6 563 aaPredicted RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 STX6O43752 255 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 IGSF3O75054 1194 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 BMP15O95972 392 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 TMTC2Q8N394 836 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 LRRC59Q96AG4 307 aaKnown RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 RTCBQ9Y3I0 505 aaKnown RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 YEATS4O95619 227 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 TERF2Q15554 542 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 KANK3Q6NY19 840 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 CERS3Q8IU89 383 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 SMC5Q8IY18 1101 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 RGS22Q8NE09 1264 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 TTC12Q9H892 705 aaPredicted RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 TRMT1Q9NXH9 659 aaKnown RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 BIN2Q9UBW5 565 aaPredicted RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 TPX2Q9ULW0 747 aaKnown RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 MFSD6Q6ZSS7 791 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 MAP4K4O95819 1239 aaPredicted RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 ZNF280CQ8ND82 737 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 ZCRB1Q8TBF4 217 aaKnown RBP11.35□□□□□ -0.59
SIM1-202ENST00000369208 RPGRIP1Q96KN7 1286 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 CAPN7Q9Y6W3 813 aa11.35□□□□□ -0.59
SIM1-202ENST00000369208 GRM1Q13255 1194 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 TPTE2Q6XPS3 522 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 BSDC1Q9NW68 430 aaPredicted RBP11.34□□□□□ -0.59
SIM1-202ENST00000369208 PIK3R4Q99570 1358 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 HIP1RO75146 1068 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 RBM27Q9P2N5 1060 aaKnown RBP11.34□□□□□ -0.59
SIM1-202ENST00000369208 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 TMED1Q13445 227 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 PIK3R5Q8WYR1 880 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 GSTTP1A0A1W2PQM5 241 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 FERP16591 822 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 TFCP2L1Q9NZI6 479 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 FSD2A1L4K1 749 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 RFX1P22670 979 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 KIF2CQ99661 725 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 ACTR5Q9H9F9 607 aaPredicted RBP11.34□□□□□ -0.59
SIM1-202ENST00000369208 WDR7Q9Y4E6 1490 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 PPFIA4O75335 1185 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 TAF12Q16514 161 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 GDAP1L1Q96MZ0 367 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 KRT23Q9C075 422 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 MRFAP1Q9Y605 127 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.34□□□□□ -0.59
SIM1-202ENST00000369208 GRIN2AQ12879 1464 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 GOLGA8AA7E2F4 631 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 GOLGA8BA8MQT2 603 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 SMC1BQ8NDV3 1235 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 CTAGE1Q96RT6 745 aa11.34□□□□□ -0.59
SIM1-202ENST00000369208 SEC62Q99442 399 aaKnown RBP11.34□□□□□ -0.59
SIM1-202ENST00000369208 LMTK3Q96Q04 1460 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 TEX11Q8IYF3 940 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 EVI5LQ96CN4 794 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 CIB2O75838 187 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 PRPHP41219 470 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 MRPS9P82933 396 aaKnown RBP11.33□□□□□ -0.6
SIM1-202ENST00000369208 ANKRD24Q8TF21 1146 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 Q9H521 79 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 CNNM2Q9H8M5 875 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 CENPKQ9BS16 269 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 IMPG2Q9BZV3 1241 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 ABCA10Q8WWZ4 1543 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 PSMC4P43686 418 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 ZC3H12CQ9C0D7 883 aaKnown RBP11.33□□□□□ -0.6
SIM1-202ENST00000369208 ANKRD2Q9GZV1 360 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 TSPY3P0CV98 308 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 TSPY8P0CW00 308 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 CCDC186Q7Z3E2 898 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 ARHGAP18Q8N392 663 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 CCDC68Q9H2F9 335 aa11.33□□□□□ -0.6
SIM1-202ENST00000369208 UHRF1BP1LA0JNW5 1464 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms