RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 SBNO2Q9Y2G9 1366 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 EDC4Q6P2E9 1401 aaKnown RBP12.35□□□□□ -0.43
EBF3-202ENST00000368648 RNMTO43148 476 aaKnown RBP12.35□□□□□ -0.43
EBF3-202ENST00000368648 ADCK5Q3MIX3 580 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 MAP9Q49MG5 647 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 LMBR1LQ6UX01 489 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 DZIP3Q86Y13 1208 aaKnown RBP12.35□□□□□ -0.43
EBF3-202ENST00000368648 UBAC1Q9BSL1 405 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 NLRP1Q9C000 1473 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 TXLNAP40222 546 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 PSMB7Q99436 277 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 MTMR6Q9Y217 621 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 RAD50Q92878 1312 aa12.35□□□□□ -0.43
EBF3-202ENST00000368648 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 EBAG9O00559 213 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 MYO1BO43795 1136 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 IVLP07476 585 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 IL13P35225 146 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 ADKP55263 362 aaKnown RBP12.34□□□□□ -0.43
EBF3-202ENST00000368648 PTH1RQ03431 593 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 SLC4A8Q2Y0W8 1093 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 CLSTN2Q9H4D0 955 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 MAP3K5Q99683 1374 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 ARHGEF40Q8TER5 1519 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 MAP3K4Q9Y6R4 1608 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 SGSM2O43147 1006 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 LRRC8AQ8IWT6 810 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 SLC26A6Q9BXS9 759 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 FAM170AA1A519 330 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 GNPATO15228 680 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 CALRP27797 417 aaKnown RBP12.34□□□□□ -0.43
EBF3-202ENST00000368648 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.34□□□□□ -0.43
EBF3-202ENST00000368648 ABCA6Q8N139 1617 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 HMGB2P26583 209 aaKnown RBP12.34□□□□□ -0.43
EBF3-202ENST00000368648 TDRD12Q587J7 1177 aaKnown RBP12.34□□□□□ -0.43
EBF3-202ENST00000368648 DZIP1Q86YF9 867 aaKnown RBP12.34□□□□□ -0.43
EBF3-202ENST00000368648 TRMT44Q8IYL2 757 aaKnown RBP12.34□□□□□ -0.43
EBF3-202ENST00000368648 PDLIM2Q96JY6 352 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 BAG1Q99933 345 aaPredicted RBP12.34□□□□□ -0.43
EBF3-202ENST00000368648 MAPK8IP1Q9UQF2 711 aa12.34□□□□□ -0.43
EBF3-202ENST00000368648 PCDH11XQ9BZA7 1347 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 PCDH11YQ9BZA8 1340 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 ZNF213O14771 459 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 SCLT1Q96NL6 688 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 CDC5LQ99459 802 aaKnown RBP12.33□□□□□ -0.44
EBF3-202ENST00000368648 KIF2CQ99661 725 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 RTCBQ9Y3I0 505 aaKnown RBP12.33□□□□□ -0.44
EBF3-202ENST00000368648 ROBO2Q9HCK4 1378 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 CCT6AP40227 531 aaKnown RBP12.33□□□□□ -0.44
EBF3-202ENST00000368648 FANCCQ00597 558 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 SPA17Q15506 151 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 CCDC43Q96MW1 224 aaKnown RBP12.33□□□□□ -0.44
EBF3-202ENST00000368648 SEPT11Q9NVA2 429 aaKnown RBP12.33□□□□□ -0.44
EBF3-202ENST00000368648 PTPRTO14522 1441 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 LARGE1O95461 756 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 CCDC175P0C221 793 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 NBPF7P0C2Y1 421 aaPredicted RBP12.33□□□□□ -0.44
EBF3-202ENST00000368648 MTX1Q13505 466 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 TERF2Q15554 542 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 MRVI1Q9Y6F6 885 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 SBNO1A3KN83 1393 aa12.33□□□□□ -0.44
EBF3-202ENST00000368648 HGSO14964 777 aaPredicted RBP12.32□□□□□ -0.44
EBF3-202ENST00000368648 ERCC3P19447 782 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 RNASE9P60153 205 aaKnown RBP12.32□□□□□ -0.44
EBF3-202ENST00000368648 GOPCQ9HD26 462 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 TMOD2Q9NZR1 351 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 CTNNA3Q9UI47 895 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 A0A1B0GUL7 405 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 SLC5A1P13866 664 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 FAM182BQ5T319 152 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 TTC19Q6DKK2 380 aaPredicted RBP12.32□□□□□ -0.44
EBF3-202ENST00000368648 CTAGE9A4FU28 777 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 IFIT3O14879 490 aaKnown RBP12.32□□□□□ -0.44
EBF3-202ENST00000368648 A1BGP04217 495 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 IARSP41252 1262 aaKnown RBP12.32□□□□□ -0.44
EBF3-202ENST00000368648 LIG3P49916 1009 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 KSR2Q6VAB6 950 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 OTUD6BQ8N6M0 293 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 HELBQ8NG08 1087 aaPredicted RBP12.32□□□□□ -0.44
EBF3-202ENST00000368648 ALG1Q9BT22 464 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 RIMS1Q86UR5 1692 aaKnown RBP12.32□□□□□ -0.44
EBF3-202ENST00000368648 GRM8O00222 908 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 GBP2P32456 591 aaPredicted RBP12.32□□□□□ -0.44
EBF3-202ENST00000368648 USP5P45974 858 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 ZNF790Q6PG37 636 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 STAMQ92783 540 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 DHX58Q96C10 678 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 TPCN1Q9ULQ1 816 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 KIDINS220Q9ULH0 1771 aa12.32□□□□□ -0.44
EBF3-202ENST00000368648 GOLGA8AA7E2F4 631 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 CDKL5O76039 1030 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 HSPA4P34932 840 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 PAFAH1B1P43034 410 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 CHMP4BP1P59074 171 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 STIM1Q13586 685 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 NLRP3Q96P20 1036 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 USP27XA6NNY8 438 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 YEATS4O95619 227 aa12.31□□□□□ -0.44
EBF3-202ENST00000368648 NEFHP12036 1026 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms