RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 CCDC155Q8N6L0 562 aa9.65□□□□□ -0.86
SSR2-202ENST00000368311 PSDA5PKW4 1024 aaPredicted RBP9.65□□□□□ -0.86
SSR2-202ENST00000368311 F8W031 263 aaPredicted RBP9.65□□□□□ -0.86
SSR2-202ENST00000368311 RARSP54136 660 aaKnown RBP9.65□□□□□ -0.86
SSR2-202ENST00000368311 PICALMQ13492 652 aa9.65□□□□□ -0.86
SSR2-202ENST00000368311 HELLSQ9NRZ9 838 aa9.65□□□□□ -0.86
SSR2-202ENST00000368311 USP17L8P0C7I0 530 aa9.65□□□□□ -0.87
SSR2-202ENST00000368311 HMGN5P82970 282 aaKnown RBP9.65□□□□□ -0.87
SSR2-202ENST00000368311 EZH2Q15910 746 aaKnown RBP9.65□□□□□ -0.87
SSR2-202ENST00000368311 TTLL5Q6EMB2 1281 aa9.65□□□□□ -0.87
SSR2-202ENST00000368311 CCDC102AQ96A19 550 aa9.65□□□□□ -0.87
SSR2-202ENST00000368311 CHMP5Q9NZZ3 219 aa9.65□□□□□ -0.87
SSR2-202ENST00000368311 IPO7O95373 1038 aaKnown RBP9.64□□□□□ -0.87
SSR2-202ENST00000368311 NUCB2P80303 420 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 CHD1LQ86WJ1 897 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 SMARCC2Q8TAQ2 1214 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 RRP36Q96EU6 259 aaKnown RBP9.64□□□□□ -0.87
SSR2-202ENST00000368311 CARD14Q9BXL6 1004 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 ZNRF3Q9ULT6 936 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 MTMR7Q9Y216 660 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 RPAP1Q9BWH6 1393 aaPredicted RBP9.64□□□□□ -0.87
SSR2-202ENST00000368311 RSPH3Q86UC2 560 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 MRPL50Q8N5N7 158 aaKnown RBP9.64□□□□□ -0.87
SSR2-202ENST00000368311 A1BGP04217 495 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 VEGFAP15692 232 aaPredicted RBP9.64□□□□□ -0.87
SSR2-202ENST00000368311 TTF2Q9UNY4 1162 aaKnown RBP9.64□□□□□ -0.87
SSR2-202ENST00000368311 CAPN2P17655 700 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 PLS1Q14651 629 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 SYCP1Q15431 976 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 SSH1Q8WYL5 1049 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 ZFYVE28Q9HCC9 887 aa9.64□□□□□ -0.87
SSR2-202ENST00000368311 RNF113AO15541 343 aaKnown RBP9.63□□□□□ -0.87
SSR2-202ENST00000368311 CALML3P27482 149 aa9.63□□□□□ -0.87
SSR2-202ENST00000368311 NLRX1Q86UT6 975 aa9.63□□□□□ -0.87
SSR2-202ENST00000368311 COL14A1Q05707 1796 aaKnown RBP9.63□□□□□ -0.87
SSR2-202ENST00000368311 SSRP1Q08945 709 aaKnown RBP9.63□□□□□ -0.87
SSR2-202ENST00000368311 DDX11Q96FC9 970 aa9.63□□□□□ -0.87
SSR2-202ENST00000368311 ORC3Q9UBD5 711 aaPredicted RBP9.63□□□□□ -0.87
SSR2-202ENST00000368311 ASAP1Q9ULH1 1129 aa9.63□□□□□ -0.87
SSR2-202ENST00000368311 ZC3H4Q9UPT8 1303 aaKnown RBP9.63□□□□□ -0.87
SSR2-202ENST00000368311 CCDC194A0A1B0GVG4 234 aa9.63□□□□□ -0.87
SSR2-202ENST00000368311 FGFR1OPO95684 399 aaKnown RBP9.63□□□□□ -0.87
SSR2-202ENST00000368311 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
SSR2-202ENST00000368311 MFSD14BQ5SR56 506 aa9.63□□□□□ -0.87
SSR2-202ENST00000368311 THUMPD2Q9BTF0 503 aaKnown RBP9.63□□□□□ -0.87
SSR2-202ENST00000368311 C6orf50Q9HD87 102 aa9.63□□□□□ -0.87
SSR2-202ENST00000368311 FBXO40Q9UH90 709 aa9.63□□□□□ -0.87
SSR2-202ENST00000368311 RFX1P22670 979 aa9.63□□□□□ -0.87
SSR2-202ENST00000368311 MATR3P43243 847 aaKnown RBP eCLIP9.63□□□□□ -0.87
SSR2-202ENST00000368311 GNPTABQ3T906 1256 aa9.63□□□□□ -0.87
SSR2-202ENST00000368311 OLFM4Q6UX06 510 aa9.63□□□□□ -0.87
SSR2-202ENST00000368311 NAT10Q9H0A0 1025 aaKnown RBP9.63□□□□□ -0.87
SSR2-202ENST00000368311 SH2B1Q9NRF2 756 aaPredicted RBP9.63□□□□□ -0.87
SSR2-202ENST00000368311 ADD3Q9UEY8 706 aaKnown RBP9.63□□□□□ -0.87
SSR2-202ENST00000368311 IBTKQ9P2D0 1353 aaPredicted RBP9.62□□□□□ -0.87
SSR2-202ENST00000368311 IFIT3O14879 490 aaKnown RBP9.62□□□□□ -0.87
SSR2-202ENST00000368311 SKOR2Q2VWA4 1001 aaPredicted RBP9.62□□□□□ -0.87
SSR2-202ENST00000368311 SPDYE3A6NKU9 549 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 NR1I2O75469 434 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 BCAR3O75815 825 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 HOXC6P09630 235 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 AMPD3Q01432 767 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 TANGO6Q9C0B7 1094 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 LNPKQ9C0E8 428 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 PAG1Q9NWQ8 432 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 NBPF7P0C2Y1 421 aaPredicted RBP9.62□□□□□ -0.87
SSR2-202ENST00000368311 HCLS1P14317 486 aaPredicted RBP9.62□□□□□ -0.87
SSR2-202ENST00000368311 GNA11P29992 359 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 ODF2Q5BJF6 829 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 PANK1Q8TE04 598 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 USP40Q9NVE5 1235 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 MCM9Q9NXL9 1143 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 MFSD14CQ5VZR4 134 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
SSR2-202ENST00000368311 AP5M1Q9H0R1 490 aa9.62□□□□□ -0.87
SSR2-202ENST00000368311 MAGEC2Q9UBF1 373 aaPredicted RBP9.62□□□□□ -0.87
SSR2-202ENST00000368311 CDAN1Q8IWY9 1227 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 TMEM57Q8N5G2 664 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 ZBTB1Q9Y2K1 713 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 GOLIM4O00461 696 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 KCTD2Q14681 263 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 AGBL3Q8NEM8 1001 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 PPLO60437 1756 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 SENP3-EIF4A1A0A087X0R7 540 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 GTF2IP78347 998 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 IFIT1BQ5T764 474 aaKnown RBP9.61□□□□□ -0.87
SSR2-202ENST00000368311 GADL1Q6ZQY3 521 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 FOXP4Q8IVH2 680 aaPredicted RBP9.61□□□□□ -0.87
SSR2-202ENST00000368311 RHPN1Q8TCX5 695 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 FAM89AQ96GI7 184 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 LGR6Q9HBX8 967 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 LUC7LQ9NQ29 371 aaKnown RBP9.61□□□□□ -0.87
SSR2-202ENST00000368311 MCM5P33992 734 aa9.61□□□□□ -0.87
SSR2-202ENST00000368311 PARK7Q99497 189 aaKnown RBP9.61□□□□□ -0.87
SSR2-202ENST00000368311 CA12O43570 354 aa9.6□□□□□ -0.87
SSR2-202ENST00000368311 WTAPQ15007 396 aa9.6□□□□□ -0.87
SSR2-202ENST00000368311 SPINK5Q9NQ38 1064 aaPredicted RBP9.6□□□□□ -0.87
SSR2-202ENST00000368311 LETM1O95202 739 aaPredicted RBP9.6□□□□□ -0.87
SSR2-202ENST00000368311 MCMDC2Q4G0Z9 681 aa9.6□□□□□ -0.87
SSR2-202ENST00000368311 DDX11L8A8MPP1 907 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms