RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 SCARF1Q14162 830 aa16.52■□□□□ 0.23
SNHG28-201ENST00000368102 DZIP3Q86Y13 1208 aaKnown RBP16.52■□□□□ 0.23
SNHG28-201ENST00000368102 BICD2Q8TD16 824 aa16.52■□□□□ 0.23
SNHG28-201ENST00000368102 RIPOR2Q9Y4F9 1068 aa16.52■□□□□ 0.23
SNHG28-201ENST00000368102 COL16A1Q07092 1604 aaPredicted RBP16.51■□□□□ 0.23
SNHG28-201ENST00000368102 IL6STP40189 918 aaPredicted RBP16.51■□□□□ 0.23
SNHG28-201ENST00000368102 CTSWP56202 376 aa16.51■□□□□ 0.23
SNHG28-201ENST00000368102 METTL24Q5JXM2 366 aa16.51■□□□□ 0.23
SNHG28-201ENST00000368102 ERCC4Q92889 916 aaPredicted RBP16.51■□□□□ 0.23
SNHG28-201ENST00000368102 OSBP2Q969R2 916 aa16.51■□□□□ 0.23
SNHG28-201ENST00000368102 H3BQV1 296 aa16.51■□□□□ 0.23
SNHG28-201ENST00000368102 M0R2C6 588 aa16.51■□□□□ 0.23
SNHG28-201ENST00000368102 PDIA4P13667 645 aaKnown RBP16.51■□□□□ 0.23
SNHG28-201ENST00000368102 PPP4R3BQ5MIZ7 849 aa16.51■□□□□ 0.23
SNHG28-201ENST00000368102 IFFO2Q5TF58 517 aa16.51■□□□□ 0.23
SNHG28-201ENST00000368102 TAOK2Q9UL54 1235 aa16.51■□□□□ 0.23
SNHG28-201ENST00000368102 KAT6BQ8WYB5 2073 aa16.51■□□□□ 0.23
SNHG28-201ENST00000368102 LRP6O75581 1613 aa16.51■□□□□ 0.23
SNHG28-201ENST00000368102 A0A0G2JS52 829 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 ANKRD18BA2A2Z9 1011 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 HAND2P61296 217 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 ATP2B3Q16720 1220 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 PI16Q6UXB8 463 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 CBX8Q9HC52 389 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 NRBP1Q9UHY1 535 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 ERVV-1B6SEH8 477 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 HMGB1P09429 215 aaKnown RBP16.5■□□□□ 0.23
SNHG28-201ENST00000368102 PTGS1P23219 599 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 ZAP70P43403 619 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 DHX32Q7L7V1 743 aaKnown RBP16.5■□□□□ 0.23
SNHG28-201ENST00000368102 ANKRD7Q92527 254 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 C8orf37Q96NL8 207 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 DNAJC25Q9H1X3 360 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 ELP1O95163 1332 aa16.5■□□□□ 0.23
SNHG28-201ENST00000368102 AHDC1Q5TGY3 1603 aaPredicted RBP16.49■□□□□ 0.23
SNHG28-201ENST00000368102 PDCL2Q8N4E4 241 aa16.49■□□□□ 0.23
SNHG28-201ENST00000368102 NSUN7Q8NE18 718 aaKnown RBP16.49■□□□□ 0.23
SNHG28-201ENST00000368102 CNNM1Q9NRU3 951 aa16.49■□□□□ 0.23
SNHG28-201ENST00000368102 RIC1Q4ADV7 1423 aa16.49■□□□□ 0.23
SNHG28-201ENST00000368102 CTIFO43310 598 aaKnown RBP16.49■□□□□ 0.23
SNHG28-201ENST00000368102 LRMPQ12912 555 aa16.49■□□□□ 0.23
SNHG28-201ENST00000368102 DDB1Q16531 1140 aa16.49■□□□□ 0.23
SNHG28-201ENST00000368102 WASHC4Q2M389 1173 aa16.49■□□□□ 0.23
SNHG28-201ENST00000368102 LRRFIP1Q32MZ4 808 aaKnown RBP16.49■□□□□ 0.23
SNHG28-201ENST00000368102 FAM200AQ8TCP9 573 aa16.49■□□□□ 0.23
SNHG28-201ENST00000368102 UBN2Q6ZU65 1347 aa16.49■□□□□ 0.23
SNHG28-201ENST00000368102 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.49■□□□□ 0.23
SNHG28-201ENST00000368102 E7EWF7 191 aa16.48■□□□□ 0.23
SNHG28-201ENST00000368102 PDE8AO60658 829 aa16.48■□□□□ 0.23
SNHG28-201ENST00000368102 SPATA31A1Q5TZJ5 1347 aa16.48■□□□□ 0.23
SNHG28-201ENST00000368102 OTUD7BQ6GQQ9 843 aa16.48■□□□□ 0.23
SNHG28-201ENST00000368102 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
SNHG28-201ENST00000368102 FBXW7Q969H0 707 aa16.48■□□□□ 0.23
SNHG28-201ENST00000368102 CDCA7Q9BWT1 371 aaPredicted RBP16.48■□□□□ 0.23
SNHG28-201ENST00000368102 SCAND2PQ9GZW5 306 aaPredicted RBP16.48■□□□□ 0.23
SNHG28-201ENST00000368102 PLCH1Q4KWH8 1693 aa16.48■□□□□ 0.23
SNHG28-201ENST00000368102 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
SNHG28-201ENST00000368102 KIF20AO95235 890 aa16.48■□□□□ 0.23
SNHG28-201ENST00000368102 ZFYP08048 801 aaPredicted RBP16.48■□□□□ 0.23
SNHG28-201ENST00000368102 CBX1P83916 185 aa16.48■□□□□ 0.23
SNHG28-201ENST00000368102 ZNF34Q8IZ26 560 aa16.48■□□□□ 0.23
SNHG28-201ENST00000368102 ACSBG1Q96GR2 724 aa16.48■□□□□ 0.23
SNHG28-201ENST00000368102 RIOK3O14730 519 aaKnown RBP16.47■□□□□ 0.23
SNHG28-201ENST00000368102 GOLPH3LQ9H4A5 285 aa16.47■□□□□ 0.23
SNHG28-201ENST00000368102 GJB4Q9NTQ9 266 aa16.47■□□□□ 0.23
SNHG28-201ENST00000368102 ADD1P35611 737 aaKnown RBP16.47■□□□□ 0.23
SNHG28-201ENST00000368102 EIF5P55010 431 aaKnown RBP16.47■□□□□ 0.23
SNHG28-201ENST00000368102 EXOSC10Q01780 885 aaKnown RBP16.47■□□□□ 0.23
SNHG28-201ENST00000368102 CLSTN2Q9H4D0 955 aa16.47■□□□□ 0.23
SNHG28-201ENST00000368102 SPEF2Q9C093 1822 aa16.46■□□□□ 0.23
SNHG28-201ENST00000368102 MYH15Q9Y2K3 1946 aa16.46■□□□□ 0.23
SNHG28-201ENST00000368102 SYCP1Q15431 976 aa16.46■□□□□ 0.23
SNHG28-201ENST00000368102 INTS5Q6P9B9 1019 aaKnown RBP16.46■□□□□ 0.23
SNHG28-201ENST00000368102 VGLL2Q8N8G2 317 aa16.46■□□□□ 0.23
SNHG28-201ENST00000368102 ZHX1Q9UKY1 873 aaPredicted RBP16.46■□□□□ 0.23
SNHG28-201ENST00000368102 DENND2AQ9ULE3 1009 aa16.46■□□□□ 0.23
SNHG28-201ENST00000368102 FOXP2O15409 715 aa16.46■□□□□ 0.22
SNHG28-201ENST00000368102 MCAMP43121 646 aa16.46■□□□□ 0.22
SNHG28-201ENST00000368102 USP28Q96RU2 1077 aa16.46■□□□□ 0.22
SNHG28-201ENST00000368102 THRAP3Q9Y2W1 955 aaKnown RBP16.46■□□□□ 0.22
SNHG28-201ENST00000368102 PFKFB2O60825 505 aa16.45■□□□□ 0.22
SNHG28-201ENST00000368102 PDE8BO95263 885 aa16.45■□□□□ 0.22
SNHG28-201ENST00000368102 ATP6V1AP38606 617 aa16.45■□□□□ 0.22
SNHG28-201ENST00000368102 C11orf57Q6ZUT1 292 aaPredicted RBP16.45■□□□□ 0.22
SNHG28-201ENST00000368102 ILDR1Q86SU0 546 aaPredicted RBP16.45■□□□□ 0.22
SNHG28-201ENST00000368102 MARCH10Q8NA82 808 aaPredicted RBP16.45■□□□□ 0.22
SNHG28-201ENST00000368102 SMARCC2Q8TAQ2 1214 aa16.45■□□□□ 0.22
SNHG28-201ENST00000368102 NKX2-3Q8TAU0 364 aa16.45■□□□□ 0.22
SNHG28-201ENST00000368102 APPBP2Q92624 585 aa16.45■□□□□ 0.22
SNHG28-201ENST00000368102 PUS7LQ9H0K6 701 aaKnown RBP16.45■□□□□ 0.22
SNHG28-201ENST00000368102 AGXT2Q9BYV1 514 aa16.45■□□□□ 0.22
SNHG28-201ENST00000368102 CCDC87Q9NVE4 849 aa16.45■□□□□ 0.22
SNHG28-201ENST00000368102 NWD2Q9ULI1 1742 aa16.44■□□□□ 0.22
SNHG28-201ENST00000368102 ABCC12Q96J65 1359 aa16.44■□□□□ 0.22
SNHG28-201ENST00000368102 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
SNHG28-201ENST00000368102 CCDC186Q7Z3E2 898 aa16.44■□□□□ 0.22
SNHG28-201ENST00000368102 FEZ1Q99689 392 aa16.44■□□□□ 0.22
SNHG28-201ENST00000368102 BCL11BQ9C0K0 894 aaPredicted RBP16.44■□□□□ 0.22
SNHG28-201ENST00000368102 SUSD4Q5VX71 490 aa16.44■□□□□ 0.22
SNHG28-201ENST00000368102 CTNNA3Q9UI47 895 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 934.9 ms