RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 TSPY3P0CV98 308 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 TSPY8P0CW00 308 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 ARHGEF2Q92974 986 aaKnown RBP13.97□□□□□ -0.17
TPR-201ENST00000367478 AGTPBP1Q9UPW5 1226 aa13.97□□□□□ -0.17
TPR-201ENST00000367478 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.17
TPR-201ENST00000367478 NBPF4Q96M43 638 aa13.96□□□□□ -0.17
TPR-201ENST00000367478 ALG1Q9BT22 464 aa13.96□□□□□ -0.17
TPR-201ENST00000367478 RTL9Q8NET4 1388 aa13.96□□□□□ -0.17
TPR-201ENST00000367478 CUL4BQ13620 913 aa13.96□□□□□ -0.17
TPR-201ENST00000367478 NUTM2AQ8IVF1 878 aaPredicted RBP13.96□□□□□ -0.17
TPR-201ENST00000367478 C9orf84Q5VXU9 1444 aa13.96□□□□□ -0.17
TPR-201ENST00000367478 ISM2Q6H9L7 571 aa13.96□□□□□ -0.17
TPR-201ENST00000367478 AFMP43652 599 aa13.96□□□□□ -0.17
TPR-201ENST00000367478 GUCA1BQ9UMX6 200 aa13.96□□□□□ -0.17
TPR-201ENST00000367478 FANCD2Q9BXW9 1451 aa13.96□□□□□ -0.18
TPR-201ENST00000367478 STX10O60499 249 aa13.96□□□□□ -0.18
TPR-201ENST00000367478 RARSP54136 660 aaKnown RBP13.96□□□□□ -0.18
TPR-201ENST00000367478 KIFC2Q96AC6 838 aa13.96□□□□□ -0.18
TPR-201ENST00000367478 MYD88Q99836 296 aa13.96□□□□□ -0.18
TPR-201ENST00000367478 SPATS2Q86XZ4 545 aaKnown RBP13.95□□□□□ -0.18
TPR-201ENST00000367478 NAP1L4Q99733 375 aaKnown RBP13.95□□□□□ -0.18
TPR-201ENST00000367478 TRIM75PA6NK02 468 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 BRAPQ7Z569 592 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 TBC1D32Q96NH3 1257 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 FAM204AQ9H8W3 233 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 TLDC2A0PJX2 215 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 GNA11P29992 359 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 TRMT112Q9UI30 125 aaKnown RBP13.95□□□□□ -0.18
TPR-201ENST00000367478 GOLGA6CA6NDK9 693 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 GOLGA6DP0CG33 693 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 KRBA2Q6ZNG9 492 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 CCDC186Q7Z3E2 898 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 GOLGA6AQ9NYA3 693 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 MIER3Q7Z3K6 550 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 DDX27Q96GQ7 796 aaKnown RBP13.95□□□□□ -0.18
TPR-201ENST00000367478 ERO1AQ96HE7 468 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 AOPEPQ8N6M6 819 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 THEGQ9P2T0 379 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 ZNF569Q5MCW4 686 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 GNAT2P19087 354 aa13.95□□□□□ -0.18
TPR-201ENST00000367478 TMEM110-MUSTN1A8MSY1 372 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 MYCNP04198 464 aaPredicted RBP13.94□□□□□ -0.18
TPR-201ENST00000367478 MTMR3Q13615 1198 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.94□□□□□ -0.18
TPR-201ENST00000367478 STX8Q9UNK0 236 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 RAD50Q92878 1312 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 KRT79Q5XKE5 535 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 CCDC89Q8N998 374 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 PANK2Q9BZ23 570 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 VAT1LQ9HCJ6 419 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 CAPZA3Q96KX2 299 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 FAM69CQ0P6D2 419 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 PPP1R42Q7Z4L9 355 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 CCDC85AQ96PX6 553 aaPredicted RBP13.94□□□□□ -0.18
TPR-201ENST00000367478 PIK3R4Q99570 1358 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 TYRO3Q06418 890 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 GBP5Q96PP8 586 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 TSKSQ9UJT2 592 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 WHAMMQ8TF30 809 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 GDPD2Q9HCC8 539 aa13.94□□□□□ -0.18
TPR-201ENST00000367478 AKR1B15C9JRZ8 316 aaPredicted RBP13.93□□□□□ -0.18
TPR-201ENST00000367478 GABPB1Q06547 395 aaPredicted RBP13.93□□□□□ -0.18
TPR-201ENST00000367478 TAF12Q16514 161 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 SSH1Q8WYL5 1049 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 PARP2Q9UGN5 583 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 LUC7L3O95232 432 aaKnown RBP13.93□□□□□ -0.18
TPR-201ENST00000367478 TTF2Q9UNY4 1162 aaKnown RBP13.93□□□□□ -0.18
TPR-201ENST00000367478 POGZQ7Z3K3 1410 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 ERCC3P19447 782 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 ARID5AQ03989 594 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 PPP2R3AQ06190 1150 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 SMIM23A6NLE4 172 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 WDR44Q5JSH3 913 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 ZNF710Q8N1W2 664 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 PPFIA3O75145 1194 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 PHLDB3Q6NSJ2 640 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 TTC16Q8NEE8 873 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 EPB41P11171 864 aaKnown RBP13.93□□□□□ -0.18
TPR-201ENST00000367478 ZNF131P52739 623 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 CCDC65Q8IXS2 484 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 EPRSP07814 1512 aaKnown RBP13.93□□□□□ -0.18
TPR-201ENST00000367478 SPTLC2O15270 562 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 MUM1L1Q5H9M0 696 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 CCDC122Q5T0U0 273 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 TTC22Q5TAA0 569 aa13.93□□□□□ -0.18
TPR-201ENST00000367478 LIN9Q5TKA1 542 aa13.92□□□□□ -0.18
TPR-201ENST00000367478 C8orf74Q6P047 294 aa13.92□□□□□ -0.18
TPR-201ENST00000367478 BAG1Q99933 345 aaPredicted RBP13.92□□□□□ -0.18
TPR-201ENST00000367478 NUP58Q9BVL2 599 aa13.92□□□□□ -0.18
TPR-201ENST00000367478 NSD2O96028 1365 aa13.92□□□□□ -0.18
TPR-201ENST00000367478 SMARCA5O60264 1052 aaPredicted RBP13.92□□□□□ -0.18
TPR-201ENST00000367478 CCDC125Q86Z20 511 aa13.92□□□□□ -0.18
TPR-201ENST00000367478 IQUBQ8NA54 791 aa13.92□□□□□ -0.18
TPR-201ENST00000367478 CCDC8Q9H0W5 538 aaPredicted RBP13.92□□□□□ -0.18
TPR-201ENST00000367478 FAM135AQ9P2D6 1515 aa13.92□□□□□ -0.18
TPR-201ENST00000367478 KRT2P35908 639 aa13.92□□□□□ -0.18
TPR-201ENST00000367478 DTHD1Q6ZMT9 781 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms