RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 CCDC69A6NI79 296 aa14.38□□□□□ -0.11
PTPN7-202ENST00000367279 ZNF213O14771 459 aa14.38□□□□□ -0.11
PTPN7-202ENST00000367279 MARCKSP29966 332 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-202ENST00000367279 NDUFA8P51970 172 aa14.38□□□□□ -0.11
PTPN7-202ENST00000367279 SNW1Q13573 536 aaKnown RBP14.38□□□□□ -0.11
PTPN7-202ENST00000367279 LRRFIP1Q32MZ4 808 aaKnown RBP14.38□□□□□ -0.11
PTPN7-202ENST00000367279 METTL24Q5JXM2 366 aa14.38□□□□□ -0.11
PTPN7-202ENST00000367279 ZNF274Q96GC6 653 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-202ENST00000367279 PUS7LQ9H0K6 701 aaKnown RBP14.38□□□□□ -0.11
PTPN7-202ENST00000367279 MRC1P22897 1456 aa14.38□□□□□ -0.11
PTPN7-202ENST00000367279 TMEM94Q12767 1356 aa14.38□□□□□ -0.11
PTPN7-202ENST00000367279 IDH1O75874 414 aaKnown RBP14.37□□□□□ -0.11
PTPN7-202ENST00000367279 FDPSP14324 419 aaKnown RBP14.37□□□□□ -0.11
PTPN7-202ENST00000367279 STK11IPQ8N1F8 1099 aa14.37□□□□□ -0.11
PTPN7-202ENST00000367279 NAT10Q9H0A0 1025 aaKnown RBP14.37□□□□□ -0.11
PTPN7-202ENST00000367279 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.37□□□□□ -0.11
PTPN7-202ENST00000367279 V9GYY5 206 aaPredicted RBP14.37□□□□□ -0.11
PTPN7-202ENST00000367279 USP27XA6NNY8 438 aa14.37□□□□□ -0.11
PTPN7-202ENST00000367279 EVA1CP58658 441 aa14.37□□□□□ -0.11
PTPN7-202ENST00000367279 TRDNQ13061 729 aa14.37□□□□□ -0.11
PTPN7-202ENST00000367279 IFIT5Q13325 482 aaKnown RBP14.37□□□□□ -0.11
PTPN7-202ENST00000367279 ILDR1Q86SU0 546 aaPredicted RBP14.37□□□□□ -0.11
PTPN7-202ENST00000367279 LRRC8AQ8IWT6 810 aa14.37□□□□□ -0.11
PTPN7-202ENST00000367279 NPHP1O15259 732 aa14.37□□□□□ -0.11
PTPN7-202ENST00000367279 CAVIN2O95810 425 aa14.37□□□□□ -0.11
PTPN7-202ENST00000367279 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
PTPN7-202ENST00000367279 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
PTPN7-202ENST00000367279 CNNM1Q9NRU3 951 aa14.37□□□□□ -0.11
PTPN7-202ENST00000367279 ATP2B3Q16720 1220 aa14.36□□□□□ -0.11
PTPN7-202ENST00000367279 NCOA7Q8NI08 942 aa14.36□□□□□ -0.11
PTPN7-202ENST00000367279 SYTL4Q96C24 671 aaPredicted RBP14.36□□□□□ -0.11
PTPN7-202ENST00000367279 AKAP2Q9Y2D5 859 aa14.36□□□□□ -0.11
PTPN7-202ENST00000367279 ARFGEF2Q9Y6D5 1785 aa14.36□□□□□ -0.11
PTPN7-202ENST00000367279 DHX16O60231 1041 aaKnown RBP14.36□□□□□ -0.11
PTPN7-202ENST00000367279 AIFM3Q96NN9 605 aa14.36□□□□□ -0.11
PTPN7-202ENST00000367279 GPR108Q9NPR9 543 aa14.36□□□□□ -0.11
PTPN7-202ENST00000367279 DENND2AQ9ULE3 1009 aa14.36□□□□□ -0.11
PTPN7-202ENST00000367279 PCDH11XQ9BZA7 1347 aa14.36□□□□□ -0.11
PTPN7-202ENST00000367279 PCDH11YQ9BZA8 1340 aa14.36□□□□□ -0.11
PTPN7-202ENST00000367279 SPTLC2O15270 562 aa14.35□□□□□ -0.11
PTPN7-202ENST00000367279 GPAA1O43292 621 aa14.35□□□□□ -0.11
PTPN7-202ENST00000367279 PTPN14Q15678 1187 aa14.35□□□□□ -0.11
PTPN7-202ENST00000367279 LDHAL6AQ6ZMR3 332 aa14.35□□□□□ -0.11
PTPN7-202ENST00000367279 KIF6Q6ZMV9 814 aa14.35□□□□□ -0.11
PTPN7-202ENST00000367279 NFXL1Q6ZNB6 911 aa14.35□□□□□ -0.11
PTPN7-202ENST00000367279 DHX40Q8IX18 779 aaKnown RBP14.35□□□□□ -0.11
PTPN7-202ENST00000367279 DPCR1Q3MIW9 517 aa14.35□□□□□ -0.11
PTPN7-202ENST00000367279 SMTNL1A8MU46 457 aa14.35□□□□□ -0.11
PTPN7-202ENST00000367279 MICU3Q86XE3 530 aa14.35□□□□□ -0.11
PTPN7-202ENST00000367279 TOMM22Q9NS69 142 aa14.35□□□□□ -0.11
PTPN7-202ENST00000367279 SLC3A2P08195 630 aaKnown RBP14.34□□□□□ -0.11
PTPN7-202ENST00000367279 SLC9C2Q5TAH2 1124 aa14.34□□□□□ -0.11
PTPN7-202ENST00000367279 TMC6Q7Z403 805 aa14.34□□□□□ -0.11
PTPN7-202ENST00000367279 ENGASEQ8NFI3 743 aa14.34□□□□□ -0.11
PTPN7-202ENST00000367279 CHMP4CQ96CF2 233 aa14.34□□□□□ -0.11
PTPN7-202ENST00000367279 LAMA4Q16363 1823 aa14.34□□□□□ -0.11
PTPN7-202ENST00000367279 TRPM3Q9HCF6 1732 aaPredicted RBP14.34□□□□□ -0.11
PTPN7-202ENST00000367279 IFNKQ9P0W0 207 aa14.34□□□□□ -0.11
PTPN7-202ENST00000367279 IGSF3O75054 1194 aa14.33□□□□□ -0.11
PTPN7-202ENST00000367279 ADALQ6DHV7 355 aa14.33□□□□□ -0.11
PTPN7-202ENST00000367279 DNAJC10Q8IXB1 793 aa14.33□□□□□ -0.11
PTPN7-202ENST00000367279 LINC00301Q8NCQ3 95 aa14.33□□□□□ -0.11
PTPN7-202ENST00000367279 APPBP2Q92624 585 aa14.33□□□□□ -0.11
PTPN7-202ENST00000367279 PHKBQ93100 1093 aa14.33□□□□□ -0.11
PTPN7-202ENST00000367279 MRFAP1L1Q96HT8 127 aa14.33□□□□□ -0.11
PTPN7-202ENST00000367279 TMOD3Q9NYL9 352 aa14.33□□□□□ -0.11
PTPN7-202ENST00000367279 ZHX1Q9UKY1 873 aaPredicted RBP14.33□□□□□ -0.11
PTPN7-202ENST00000367279 TCIRG1Q13488 830 aa14.33□□□□□ -0.12
PTPN7-202ENST00000367279 MYSM1Q5VVJ2 828 aa14.33□□□□□ -0.12
PTPN7-202ENST00000367279 FMR1NBQ8N0W7 255 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-202ENST00000367279 HELBQ8NG08 1087 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-202ENST00000367279 MYL10Q9BUA6 226 aa14.33□□□□□ -0.12
PTPN7-202ENST00000367279 RTEL1Q9NZ71 1219 aa14.33□□□□□ -0.12
PTPN7-202ENST00000367279 KIF28PB7ZC32 967 aa14.33□□□□□ -0.12
PTPN7-202ENST00000367279 CIAO1O76071 339 aa14.33□□□□□ -0.12
PTPN7-202ENST00000367279 LMOD1P29536 600 aaPredicted RBP14.33□□□□□ -0.12
PTPN7-202ENST00000367279 FBXO18Q8NFZ0 1043 aa14.33□□□□□ -0.12
PTPN7-202ENST00000367279 AGXT2Q9BYV1 514 aa14.33□□□□□ -0.12
PTPN7-202ENST00000367279 ZFYP08048 801 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-202ENST00000367279 TPM4P67936 248 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 ATL3Q6DD88 541 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 CADPS2Q86UW7 1296 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 KCNG4Q8TDN1 519 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 ALG1Q9BT22 464 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTPN7-202ENST00000367279 KIAA1468Q9P260 1216 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 SALL1Q9NSC2 1324 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 ZNF202O95125 648 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 IL2RBP14784 551 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 NCBP1Q09161 790 aaKnown RBP14.32□□□□□ -0.12
PTPN7-202ENST00000367279 CCDC82Q8N4S0 544 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 B4E1Z4 1266 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 CDC25BP30305 580 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 METAP2P50579 478 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTPN7-202ENST00000367279 ANTXR2P58335 489 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 PTPN21Q16825 1174 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 RRP12Q5JTH9 1297 aaKnown RBP14.32□□□□□ -0.12
PTPN7-202ENST00000367279 SARM1Q6SZW1 724 aa14.32□□□□□ -0.12
PTPN7-202ENST00000367279 XPO4Q9C0E2 1151 aaKnown RBP14.32□□□□□ -0.12
PTPN7-202ENST00000367279 INCENPQ9NQS7 918 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms