RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 FOXD4L6Q3SYB3 417 aaPredicted RBP5.79□□□□□ -1.48
RNU4-48P-201ENST00000365559 PRPF40BQ6NWY9 871 aaKnown RBP5.79□□□□□ -1.48
RNU4-48P-201ENST00000365559 FAM117BQ6P1L5 589 aa5.79□□□□□ -1.48
RNU4-48P-201ENST00000365559 IGF2-ASQ6U949 168 aa5.79□□□□□ -1.48
RNU4-48P-201ENST00000365559 FOXD4L3Q6VB84 417 aaPredicted RBP5.79□□□□□ -1.48
RNU4-48P-201ENST00000365559 MAP4K3Q8IVH8 894 aa5.79□□□□□ -1.48
RNU4-48P-201ENST00000365559 SLC7A3Q8WY07 619 aa5.79□□□□□ -1.48
RNU4-48P-201ENST00000365559 LENG1Q96BZ8 264 aaPredicted RBP5.79□□□□□ -1.48
RNU4-48P-201ENST00000365559 KLHDC7BQ96G42 594 aa5.79□□□□□ -1.48
RNU4-48P-201ENST00000365559 SRA1Q9HD15 236 aaKnown RBP5.79□□□□□ -1.48
RNU4-48P-201ENST00000365559 SEC31BQ9NQW1 1179 aa5.79□□□□□ -1.48
RNU4-48P-201ENST00000365559 TMEM238LA0A1B0GVL6 79 aa5.78□□□□□ -1.48
RNU4-48P-201ENST00000365559 ADAM11O75078 769 aa5.78□□□□□ -1.48
RNU4-48P-201ENST00000365559 ESRRAP11474 423 aaPredicted RBP5.78□□□□□ -1.48
RNU4-48P-201ENST00000365559 ALG1LQ6GMV1 187 aa5.78□□□□□ -1.48
RNU4-48P-201ENST00000365559 NXPE4Q6UWF7 544 aa5.78□□□□□ -1.48
RNU4-48P-201ENST00000365559 FBF1Q8TES7 1133 aa5.78□□□□□ -1.48
RNU4-48P-201ENST00000365559 NACC1Q96RE7 527 aa5.78□□□□□ -1.48
RNU4-48P-201ENST00000365559 SPOCK3Q9BQ16 436 aa5.78□□□□□ -1.48
RNU4-48P-201ENST00000365559 BCO2Q9BYV7 579 aa5.78□□□□□ -1.48
RNU4-48P-201ENST00000365559 RNF19AQ9NV58 838 aa5.78□□□□□ -1.48
RNU4-48P-201ENST00000365559 USP21Q9UK80 565 aa5.78□□□□□ -1.48
RNU4-48P-201ENST00000365559 C9orf172C9J069 976 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 WISP1O95388 367 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 PROCP04070 461 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 ITPKAP23677 461 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 CD68P34810 354 aaPredicted RBP5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 ATP2B2Q01814 1243 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 PCDH1Q08174 1060 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 ADGRE1Q14246 886 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 MBTPS1Q14703 1052 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 COL19A1Q14993 1142 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 ZNF423Q2M1K9 1284 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 EAPPQ56P03 285 aaPredicted RBP5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 TMCO4Q5TGY1 634 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 KLHL23Q8NBE8 558 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 FOXD4L4Q8WXT5 416 aaPredicted RBP5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 WNT8BQ93098 351 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 OSBPL7Q9BZF2 842 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 CLEC4MQ9H2X3 399 aaPredicted RBP5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 ZNF576Q9H609 170 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 TRAK1Q9UPV9 953 aa5.77□□□□□ -1.49
RNU4-48P-201ENST00000365559 MSTNO14793 375 aa5.76□□□□□ -1.49
RNU4-48P-201ENST00000365559 FCGRTP55899 365 aa5.76□□□□□ -1.49
RNU4-48P-201ENST00000365559 NLRP12P59046 1061 aa5.76□□□□□ -1.49
RNU4-48P-201ENST00000365559 TAGLNQ01995 201 aaKnown RBP5.76□□□□□ -1.49
RNU4-48P-201ENST00000365559 C19orf57Q0VDD7 668 aa5.76□□□□□ -1.49
RNU4-48P-201ENST00000365559 SUZ12Q15022 739 aaKnown RBP5.76□□□□□ -1.49
RNU4-48P-201ENST00000365559 FBXO33Q7Z6M2 555 aa5.76□□□□□ -1.49
RNU4-48P-201ENST00000365559 UBASH3BQ8TF42 649 aa5.76□□□□□ -1.49
RNU4-48P-201ENST00000365559 OSGEPQ9NPF4 335 aa5.76□□□□□ -1.49
RNU4-48P-201ENST00000365559 PRPF40AO75400 957 aaKnown RBP5.75□□□□□ -1.49
RNU4-48P-201ENST00000365559 ALX3O95076 343 aa5.75□□□□□ -1.49
RNU4-48P-201ENST00000365559 B3GALT4O96024 378 aa5.75□□□□□ -1.49
RNU4-48P-201ENST00000365559 NOS3P29474 1203 aa5.75□□□□□ -1.49
RNU4-48P-201ENST00000365559 NRG1Q02297 640 aaPredicted RBP5.75□□□□□ -1.49
RNU4-48P-201ENST00000365559 DCAF11Q8TEB1 546 aa5.75□□□□□ -1.49
RNU4-48P-201ENST00000365559 WFDC12Q8WWY7 111 aa5.75□□□□□ -1.49
RNU4-48P-201ENST00000365559 DUSP9Q99956 384 aaKnown RBP5.75□□□□□ -1.49
RNU4-48P-201ENST00000365559 MRPL18Q9H0U6 180 aaKnown RBP5.75□□□□□ -1.49
RNU4-48P-201ENST00000365559 F8W735 103 aaPredicted RBP5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 IGHA1P01876 353 aa5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 GATA4P43694 442 aa5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 IREB2P48200 963 aaKnown RBP5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 ARL4DP49703 201 aa5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 GSTM4Q03013 218 aa5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 PTPN12Q05209 780 aaKnown RBP5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 FAAP100Q0VG06 881 aa5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 DTHD1Q6ZMT9 781 aa5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 ACAD11Q709F0 780 aa5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 TXNRD3Q86VQ6 643 aa5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 AGGF1Q8N302 714 aaeCLIP5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 C3orf58Q8NDZ4 430 aa5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 SOX17Q9H6I2 414 aaPredicted RBP5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 AKTIPQ9H8T0 292 aa5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 SPG7Q9UQ90 795 aa5.74□□□□□ -1.49
RNU4-48P-201ENST00000365559 ERCC3P19447 782 aa5.73□□□□□ -1.49
RNU4-48P-201ENST00000365559 GNA15P30679 374 aa5.73□□□□□ -1.49
RNU4-48P-201ENST00000365559 ZNF157P51786 506 aaPredicted RBP5.73□□□□□ -1.49
RNU4-48P-201ENST00000365559 MFAP1P55081 439 aaKnown RBP5.73□□□□□ -1.49
RNU4-48P-201ENST00000365559 DUOXA2Q1HG44 320 aa5.73□□□□□ -1.49
RNU4-48P-201ENST00000365559 KIAA1211Q6ZU35 1233 aa5.73□□□□□ -1.49
RNU4-48P-201ENST00000365559 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.73□□□□□ -1.49
RNU4-48P-201ENST00000365559 TMEM130Q8N3G9 435 aa5.73□□□□□ -1.49
RNU4-48P-201ENST00000365559 NRSN2Q9GZP1 204 aa5.73□□□□□ -1.49
RNU4-48P-201ENST00000365559 PPP4R2Q9NY27 417 aa5.73□□□□□ -1.49
RNU4-48P-201ENST00000365559 AKAP2Q9Y2D5 859 aa5.73□□□□□ -1.49
RNU4-48P-201ENST00000365559 GIPC1O14908 333 aa5.72□□□□□ -1.49
RNU4-48P-201ENST00000365559 DLGAP3O95886 979 aa5.72□□□□□ -1.49
RNU4-48P-201ENST00000365559 DOC2BQ14184 412 aa5.72□□□□□ -1.49
RNU4-48P-201ENST00000365559 RPS26P11Q5JNZ5 115 aaPredicted RBP5.72□□□□□ -1.49
RNU4-48P-201ENST00000365559 MEGF10Q96KG7 1140 aa5.72□□□□□ -1.49
RNU4-48P-201ENST00000365559 TRIM56Q9BRZ2 755 aaKnown RBP5.72□□□□□ -1.49
RNU4-48P-201ENST00000365559 USP26Q9BXU7 913 aa5.72□□□□□ -1.49
RNU4-48P-201ENST00000365559 C12orf49Q9H741 205 aa5.72□□□□□ -1.49
RNU4-48P-201ENST00000365559 PARP2Q9UGN5 583 aa5.72□□□□□ -1.49
RNU4-48P-201ENST00000365559 LOC100289279A0A1B0GTE1 492 aa5.71□□□□□ -1.5
RNU4-48P-201ENST00000365559 ECEL1O95672 775 aa5.71□□□□□ -1.5
RNU4-48P-201ENST00000365559 CTSBP07858 339 aa5.71□□□□□ -1.5
RNU4-48P-201ENST00000365559 USP17L7P0C7H9 530 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms