RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ALKBH8Q96BT7 664 aaKnown RBP8.41□□□□□ -1.06
RNU4-28P-201ENST00000364739 SETDB2Q96T68 719 aa8.41□□□□□ -1.06
RNU4-28P-201ENST00000364739 BHLHE41Q9C0J9 482 aaPredicted RBP8.41□□□□□ -1.06
RNU4-28P-201ENST00000364739 EHD4Q9H223 541 aa8.41□□□□□ -1.06
RNU4-28P-201ENST00000364739 H3BRJ5 948 aa8.4□□□□□ -1.06
RNU4-28P-201ENST00000364739 TREHO43280 583 aa8.4□□□□□ -1.06
RNU4-28P-201ENST00000364739 ADAM11O75078 769 aa8.4□□□□□ -1.06
RNU4-28P-201ENST00000364739 NOS3P29474 1203 aa8.4□□□□□ -1.06
RNU4-28P-201ENST00000364739 CD68P34810 354 aaPredicted RBP8.4□□□□□ -1.06
RNU4-28P-201ENST00000364739 CABP4P57796 275 aa8.4□□□□□ -1.06
RNU4-28P-201ENST00000364739 FAM117BQ6P1L5 589 aa8.4□□□□□ -1.06
RNU4-28P-201ENST00000364739 CCNJLQ8IV13 435 aa8.4□□□□□ -1.06
RNU4-28P-201ENST00000364739 DNAJC25Q9H1X3 360 aa8.4□□□□□ -1.06
RNU4-28P-201ENST00000364739 SEC31BQ9NQW1 1179 aa8.4□□□□□ -1.06
RNU4-28P-201ENST00000364739 TPSG1Q9NRR2 321 aa8.4□□□□□ -1.06
RNU4-28P-201ENST00000364739 A0A096LPE4 126 aa8.39□□□□□ -1.07
RNU4-28P-201ENST00000364739 PNMA6FA0A0J9YX94 578 aa8.39□□□□□ -1.07
RNU4-28P-201ENST00000364739 KRTAP9-6A0A140TA67 174 aa8.39□□□□□ -1.07
RNU4-28P-201ENST00000364739 A0A1W2PPZ6 126 aa8.39□□□□□ -1.07
RNU4-28P-201ENST00000364739 GADD45BO75293 160 aaPredicted RBP8.39□□□□□ -1.07
RNU4-28P-201ENST00000364739 MAPK8P45983 427 aa8.39□□□□□ -1.07
RNU4-28P-201ENST00000364739 NRG1Q02297 640 aaPredicted RBP8.39□□□□□ -1.07
RNU4-28P-201ENST00000364739 KIAA0319Q5VV43 1072 aa8.39□□□□□ -1.07
RNU4-28P-201ENST00000364739 TXNRD3Q86VQ6 643 aa8.39□□□□□ -1.07
RNU4-28P-201ENST00000364739 MAP4K3Q8IVH8 894 aa8.39□□□□□ -1.07
RNU4-28P-201ENST00000364739 WWC3Q9ULE0 1092 aa8.39□□□□□ -1.07
RNU4-28P-201ENST00000364739 PATL2C9JE40 543 aaKnown RBP8.38□□□□□ -1.07
RNU4-28P-201ENST00000364739 NLRP12P59046 1061 aa8.38□□□□□ -1.07
RNU4-28P-201ENST00000364739 IKBKEQ14164 716 aa8.38□□□□□ -1.07
RNU4-28P-201ENST00000364739 UBASH3BQ8TF42 649 aa8.38□□□□□ -1.07
RNU4-28P-201ENST00000364739 FOXD4L4Q8WXT5 416 aaPredicted RBP8.38□□□□□ -1.07
RNU4-28P-201ENST00000364739 ASB16Q96NS5 453 aa8.38□□□□□ -1.07
RNU4-28P-201ENST00000364739 ZSCAN29Q8IWY8 852 aaPredicted RBP8.37□□□□□ -1.07
RNU4-28P-201ENST00000364739 KLHL23Q8NBE8 558 aa8.37□□□□□ -1.07
RNU4-28P-201ENST00000364739 MRPL18Q9H0U6 180 aaKnown RBP8.37□□□□□ -1.07
RNU4-28P-201ENST00000364739 AKTIPQ9H8T0 292 aa8.37□□□□□ -1.07
RNU4-28P-201ENST00000364739 SRA1Q9HD15 236 aaKnown RBP8.37□□□□□ -1.07
RNU4-28P-201ENST00000364739 SCO2A0A1W2PP80 73 aa8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 F8W735 103 aaPredicted RBP8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 DYRK3O43781 588 aa8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 ESRRAP11474 423 aaPredicted RBP8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 PIP4K2BP78356 416 aa8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 GRM2Q14416 872 aa8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 DUOXA2Q1HG44 320 aa8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 ZNF423Q2M1K9 1284 aa8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 ACAD11Q709F0 780 aa8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 SND1Q7KZF4 910 aaKnown RBP eCLIP8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 MEGF10Q96KG7 1140 aa8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 GZF1Q9H116 711 aaPredicted RBP8.36□□□□□ -1.07
RNU4-28P-201ENST00000364739 C19orf57Q0VDD7 668 aa8.35□□□□□ -1.07
RNU4-28P-201ENST00000364739 ENOX2Q16206 610 aaKnown RBP8.35□□□□□ -1.07
RNU4-28P-201ENST00000364739 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.35□□□□□ -1.07
RNU4-28P-201ENST00000364739 TP53INP1Q96A56 240 aa8.35□□□□□ -1.07
RNU4-28P-201ENST00000364739 ZNF157P51786 506 aaPredicted RBP8.34□□□□□ -1.07
RNU4-28P-201ENST00000364739 GSTM4Q03013 218 aa8.34□□□□□ -1.07
RNU4-28P-201ENST00000364739 PCDH1Q08174 1060 aa8.34□□□□□ -1.07
RNU4-28P-201ENST00000364739 ARTNQ5T4W7 220 aa8.34□□□□□ -1.07
RNU4-28P-201ENST00000364739 KIAA1211Q6ZU35 1233 aa8.34□□□□□ -1.07
RNU4-28P-201ENST00000364739 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.34□□□□□ -1.07
RNU4-28P-201ENST00000364739 TMEM130Q8N3G9 435 aa8.34□□□□□ -1.07
RNU4-28P-201ENST00000364739 GLIS3Q8NEA6 775 aa8.34□□□□□ -1.07
RNU4-28P-201ENST00000364739 ABCB6Q9NP58 842 aa8.34□□□□□ -1.07
RNU4-28P-201ENST00000364739 OSGEPQ9NPF4 335 aa8.34□□□□□ -1.07
RNU4-28P-201ENST00000364739 NLRP2Q9NX02 1062 aa8.34□□□□□ -1.07
RNU4-28P-201ENST00000364739 P4HBP07237 508 aaKnown RBP8.33□□□□□ -1.08
RNU4-28P-201ENST00000364739 GLB1P16278 677 aa8.33□□□□□ -1.08
RNU4-28P-201ENST00000364739 ARL4DP49703 201 aa8.33□□□□□ -1.08
RNU4-28P-201ENST00000364739 FMR1Q06787 632 aaKnown RBP eCLIP8.33□□□□□ -1.08
RNU4-28P-201ENST00000364739 NXPE4Q6UWF7 544 aa8.33□□□□□ -1.08
RNU4-28P-201ENST00000364739 WNT8BQ93098 351 aa8.33□□□□□ -1.08
RNU4-28P-201ENST00000364739 SSBP4Q9BWG4 385 aaPredicted RBP8.33□□□□□ -1.08
RNU4-28P-201ENST00000364739 CLEC4MQ9H2X3 399 aaPredicted RBP8.33□□□□□ -1.08
RNU4-28P-201ENST00000364739 ZFP64Q9NPA5 681 aa8.33□□□□□ -1.08
RNU4-28P-201ENST00000364739 TMEM238LA0A1B0GVL6 79 aa8.32□□□□□ -1.08
RNU4-28P-201ENST00000364739 DLGAP3O95886 979 aa8.32□□□□□ -1.08
RNU4-28P-201ENST00000364739 FCGRTP55899 365 aa8.32□□□□□ -1.08
RNU4-28P-201ENST00000364739 UBL7Q96S82 380 aaPredicted RBP8.32□□□□□ -1.08
RNU4-28P-201ENST00000364739 USP26Q9BXU7 913 aa8.32□□□□□ -1.08
RNU4-28P-201ENST00000364739 BCO2Q9BYV7 579 aa8.32□□□□□ -1.08
RNU4-28P-201ENST00000364739 ANKRD33BA6NCL7 494 aa8.31□□□□□ -1.08
RNU4-28P-201ENST00000364739 DCAF11Q8TEB1 546 aa8.31□□□□□ -1.08
RNU4-28P-201ENST00000364739 ZNF576Q9H609 170 aa8.31□□□□□ -1.08
RNU4-28P-201ENST00000364739 RNF19AQ9NV58 838 aa8.31□□□□□ -1.08
RNU4-28P-201ENST00000364739 ITPKAP23677 461 aa8.3□□□□□ -1.08
RNU4-28P-201ENST00000364739 ECEL1O95672 775 aa8.29□□□□□ -1.08
RNU4-28P-201ENST00000364739 CTSBP07858 339 aa8.29□□□□□ -1.08
RNU4-28P-201ENST00000364739 FAAP100Q0VG06 881 aa8.29□□□□□ -1.08
RNU4-28P-201ENST00000364739 PRSS36Q5K4E3 855 aa8.29□□□□□ -1.08
RNU4-28P-201ENST00000364739 PRPF40BQ6NWY9 871 aaKnown RBP8.29□□□□□ -1.08
RNU4-28P-201ENST00000364739 DTHD1Q6ZMT9 781 aa8.29□□□□□ -1.08
RNU4-28P-201ENST00000364739 DZIP1LQ8IYY4 767 aaKnown RBP8.29□□□□□ -1.08
RNU4-28P-201ENST00000364739 OSBPL7Q9BZF2 842 aa8.29□□□□□ -1.08
RNU4-28P-201ENST00000364739 LOC100289279A0A1B0GTE1 492 aa8.28□□□□□ -1.08
RNU4-28P-201ENST00000364739 H2AFB1P0C5Y9 115 aa8.28□□□□□ -1.08
RNU4-28P-201ENST00000364739 H2AFB2P0C5Z0 115 aa8.28□□□□□ -1.08
RNU4-28P-201ENST00000364739 RUSC1Q9BVN2 902 aa8.28□□□□□ -1.08
RNU4-28P-201ENST00000364739 TRAK1Q9UPV9 953 aa8.28□□□□□ -1.08
RNU4-28P-201ENST00000364739 AKAP2Q9Y2D5 859 aa8.28□□□□□ -1.08
RNU4-28P-201ENST00000364739 LDHBP07195 334 aaKnown RBP8.27□□□□□ -1.09
RNU4-28P-201ENST00000364739 DNAJC14Q6Y2X3 702 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms