RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ADGRL2O95490 1459 aa21.22■□□□□ 0.99
CLIP2-202ENST00000361545 GBP2P32456 591 aaPredicted RBP21.22■□□□□ 0.99
CLIP2-202ENST00000361545 ZBTB21Q9ULJ3 1066 aa21.22■□□□□ 0.99
CLIP2-202ENST00000361545 LUZP1Q86V48 1076 aa21.22■□□□□ 0.99
CLIP2-202ENST00000361545 SMC5Q8IY18 1101 aa21.22■□□□□ 0.99
CLIP2-202ENST00000361545 DHX58Q96C10 678 aa21.22■□□□□ 0.99
CLIP2-202ENST00000361545 MRPS27Q92552 414 aaKnown RBP21.21■□□□□ 0.99
CLIP2-202ENST00000361545 TMCO5BA8MYB1 307 aa21.21■□□□□ 0.99
CLIP2-202ENST00000361545 TCHPQ9BT92 498 aa21.21■□□□□ 0.99
CLIP2-202ENST00000361545 CPA1P15085 419 aa21.21■□□□□ 0.99
CLIP2-202ENST00000361545 ZRSR2Q15696 482 aaKnown RBP21.21■□□□□ 0.99
CLIP2-202ENST00000361545 PTPDC1A2A3K4 754 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 CTNNA2P26232 953 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 MCM7P33993 719 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 NOP2P46087 812 aaKnown RBP21.2■□□□□ 0.98
CLIP2-202ENST00000361545 GCKRQ14397 625 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 KRT2P35908 639 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 HELLSQ9NRZ9 838 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 B4E1Z4 1266 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 CA8P35219 290 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 MSL1Q68DK7 614 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 USP48Q86UV5 1035 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 NDUFB9Q9Y6M9 179 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 F13A1P00488 732 aa21.2■□□□□ 0.98
CLIP2-202ENST00000361545 PARP1P09874 1014 aaKnown RBP21.2■□□□□ 0.98
CLIP2-202ENST00000361545 EIF4A1P60842 406 aaKnown RBP21.2■□□□□ 0.98
CLIP2-202ENST00000361545 CWC15Q9P013 229 aaKnown RBP21.2■□□□□ 0.98
CLIP2-202ENST00000361545 PRDM1O75626 825 aa21.19■□□□□ 0.98
CLIP2-202ENST00000361545 ADCY5O95622 1261 aa21.19■□□□□ 0.98
CLIP2-202ENST00000361545 GPCPD1Q9NPB8 672 aa21.19■□□□□ 0.98
CLIP2-202ENST00000361545 GSTTP1A0A1W2PQM5 241 aa21.19■□□□□ 0.98
CLIP2-202ENST00000361545 RUFY3Q7L099 469 aa21.19■□□□□ 0.98
CLIP2-202ENST00000361545 KIF18AQ8NI77 898 aa21.19■□□□□ 0.98
CLIP2-202ENST00000361545 KIF2AO00139 706 aaPredicted RBP21.19■□□□□ 0.98
CLIP2-202ENST00000361545 KRT79Q5XKE5 535 aa21.19■□□□□ 0.98
CLIP2-202ENST00000361545 AATFQ9NY61 560 aaKnown RBP eCLIP21.19■□□□□ 0.98
CLIP2-202ENST00000361545 RAD50Q92878 1312 aa21.18■□□□□ 0.98
CLIP2-202ENST00000361545 PRPF4BQ13523 1007 aaKnown RBP21.18■□□□□ 0.98
CLIP2-202ENST00000361545 SPTLC2O15270 562 aa21.18■□□□□ 0.98
CLIP2-202ENST00000361545 KCNQ3O43525 872 aa21.18■□□□□ 0.98
CLIP2-202ENST00000361545 GNA11P29992 359 aa21.18■□□□□ 0.98
CLIP2-202ENST00000361545 DACT1Q9NYF0 836 aa21.18■□□□□ 0.98
CLIP2-202ENST00000361545 TMEM94Q12767 1356 aa21.18■□□□□ 0.98
CLIP2-202ENST00000361545 B4DLN1 442 aa21.18■□□□□ 0.98
CLIP2-202ENST00000361545 PHACTR2O75167 634 aa21.18■□□□□ 0.98
CLIP2-202ENST00000361545 MRPL12P52815 198 aaKnown RBP21.18■□□□□ 0.98
CLIP2-202ENST00000361545 ZYXQ15942 572 aaKnown RBP21.18■□□□□ 0.98
CLIP2-202ENST00000361545 PAFAH1B1P43034 410 aa21.18■□□□□ 0.98
CLIP2-202ENST00000361545 BAG6P46379 1132 aa21.17■□□□□ 0.98
CLIP2-202ENST00000361545 PRKG1Q13976 671 aa21.17■□□□□ 0.98
CLIP2-202ENST00000361545 PKD2L1Q9P0L9 805 aa21.17■□□□□ 0.98
CLIP2-202ENST00000361545 ERVV-2B6SEH9 535 aa21.17■□□□□ 0.98
CLIP2-202ENST00000361545 PTPRTO14522 1441 aa21.17■□□□□ 0.98
CLIP2-202ENST00000361545 SPAG5Q96R06 1193 aa21.17■□□□□ 0.98
CLIP2-202ENST00000361545 PLIN2Q99541 437 aa21.17■□□□□ 0.98
CLIP2-202ENST00000361545 CCDC113Q9H0I3 377 aa21.17■□□□□ 0.98
CLIP2-202ENST00000361545 PNMA6EA0A0J9YXQ4 647 aa21.17■□□□□ 0.98
CLIP2-202ENST00000361545 KLHL40Q2TBA0 621 aa21.16■□□□□ 0.98
CLIP2-202ENST00000361545 C16orf45Q96MC5 204 aaPredicted RBP21.16■□□□□ 0.98
CLIP2-202ENST00000361545 GSDMDP57764 484 aa21.16■□□□□ 0.98
CLIP2-202ENST00000361545 C8orf34Q49A92 452 aa21.16■□□□□ 0.98
CLIP2-202ENST00000361545 LPIN2Q92539 896 aa21.16■□□□□ 0.98
CLIP2-202ENST00000361545 GOPCQ9HD26 462 aa21.16■□□□□ 0.98
CLIP2-202ENST00000361545 PICK1Q9NRD5 415 aa21.16■□□□□ 0.98
CLIP2-202ENST00000361545 KRT13P13646 458 aa21.16■□□□□ 0.98
CLIP2-202ENST00000361545 PHKG2P15735 406 aa21.16■□□□□ 0.98
CLIP2-202ENST00000361545 CRACR2AQ9BSW2 395 aa21.15■□□□□ 0.98
CLIP2-202ENST00000361545 ZSCAN23Q3MJ62 389 aa21.15■□□□□ 0.98
CLIP2-202ENST00000361545 WDR66Q8TBY9 1149 aa21.15■□□□□ 0.98
CLIP2-202ENST00000361545 BACH1O14867 736 aa21.15■□□□□ 0.98
CLIP2-202ENST00000361545 GPAA1O43292 621 aa21.15■□□□□ 0.98
CLIP2-202ENST00000361545 AKR1B10O60218 316 aa21.15■□□□□ 0.98
CLIP2-202ENST00000361545 ALS2CR12Q96Q35 445 aa21.15■□□□□ 0.98
CLIP2-202ENST00000361545 TCP10Q12799 353 aa21.15■□□□□ 0.98
CLIP2-202ENST00000361545 SH2D4AQ9H788 454 aa21.15■□□□□ 0.98
CLIP2-202ENST00000361545 PSMA7O14818 248 aa21.14■□□□□ 0.98
CLIP2-202ENST00000361545 UBASH3AP57075 661 aa21.14■□□□□ 0.98
CLIP2-202ENST00000361545 ANO6Q4KMQ2 910 aa21.14■□□□□ 0.98
CLIP2-202ENST00000361545 CCDC97Q96F63 343 aaPredicted RBP21.14■□□□□ 0.98
CLIP2-202ENST00000361545 NPC1L1Q9UHC9 1359 aa21.14■□□□□ 0.97
CLIP2-202ENST00000361545 APPBP2Q92624 585 aa21.14■□□□□ 0.97
CLIP2-202ENST00000361545 FAM227BQ96M60 508 aa21.14■□□□□ 0.97
CLIP2-202ENST00000361545 USP37Q86T82 979 aa21.13■□□□□ 0.97
CLIP2-202ENST00000361545 FCHSD1Q86WN1 690 aa21.13■□□□□ 0.97
CLIP2-202ENST00000361545 FAM212AQ96EL1 285 aa21.13■□□□□ 0.97
CLIP2-202ENST00000361545 IL17REQ8NFR9 667 aa21.13■□□□□ 0.97
CLIP2-202ENST00000361545 SYNCQ9H7C4 482 aa21.13■□□□□ 0.97
CLIP2-202ENST00000361545 RBM28Q9NW13 759 aaKnown RBP21.13■□□□□ 0.97
CLIP2-202ENST00000361545 FAM13AO94988 1023 aa21.13■□□□□ 0.97
CLIP2-202ENST00000361545 PPM1FP49593 454 aaPredicted RBP21.13■□□□□ 0.97
CLIP2-202ENST00000361545 TCIRG1Q13488 830 aa21.12■□□□□ 0.97
CLIP2-202ENST00000361545 LETM2Q2VYF4 491 aa21.12■□□□□ 0.97
CLIP2-202ENST00000361545 USP26Q9BXU7 913 aa21.12■□□□□ 0.97
CLIP2-202ENST00000361545 AKNAD1Q5T1N1 836 aa21.12■□□□□ 0.97
CLIP2-202ENST00000361545 MAST3O60307 1309 aa21.12■□□□□ 0.97
CLIP2-202ENST00000361545 RTL1A6NKG5 1358 aa21.12■□□□□ 0.97
CLIP2-202ENST00000361545 DTHD1Q6ZMT9 781 aa21.12■□□□□ 0.97
CLIP2-202ENST00000361545 SPATA5Q8NB90 893 aa21.12■□□□□ 0.97
CLIP2-202ENST00000361545 TTC16Q8NEE8 873 aa21.12■□□□□ 0.97
CLIP2-202ENST00000361545 BIN2Q9UBW5 565 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms