RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 KRT2P35908 639 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 PPP2R5BQ15173 497 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 TBC1D22AQ8WUA7 517 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 ALS2CR12Q96Q35 445 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 TNNQ9UQP3 1299 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 SPTLC2O15270 562 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 PHKG2P15735 406 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 TCIRG1Q13488 830 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 TMEM94Q12767 1356 aa15.38■□□□□ 0.05
LDB3-202ENST00000361373 GBP2P32456 591 aaPredicted RBP15.37■□□□□ 0.05
LDB3-202ENST00000361373 XAGE2Q96GT9 111 aa15.37■□□□□ 0.05
LDB3-202ENST00000361373 H0YHG0 523 aa15.37■□□□□ 0.05
LDB3-202ENST00000361373 TIMM10P62072 90 aa15.37■□□□□ 0.05
LDB3-202ENST00000361373 N4BP3O15049 544 aa15.37■□□□□ 0.05
LDB3-202ENST00000361373 EHBP1Q8NDI1 1231 aa15.37■□□□□ 0.05
LDB3-202ENST00000361373 USP25Q9UHP3 1055 aa15.37■□□□□ 0.05
LDB3-202ENST00000361373 ALDH1B1P30837 517 aa15.37■□□□□ 0.05
LDB3-202ENST00000361373 AK2P54819 239 aa15.37■□□□□ 0.05
LDB3-202ENST00000361373 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.37■□□□□ 0.05
LDB3-202ENST00000361373 SAMD9LQ8IVG5 1584 aa15.37■□□□□ 0.05
LDB3-202ENST00000361373 IFI16Q16666 785 aaKnown RBP15.37■□□□□ 0.05
LDB3-202ENST00000361373 SKIDA1Q1XH10 827 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 KBTBD3Q8NAB2 608 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 CCDC66A2RUB6 948 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 PARP1P09874 1014 aaKnown RBP15.36■□□□□ 0.05
LDB3-202ENST00000361373 CASQ1P31415 396 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 BAG6P46379 1132 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 USP26Q9BXU7 913 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 ATP7BP35670 1465 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 C8orf34Q49A92 452 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 DBNDD2Q9BQY9 259 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 GIGYF1O75420 1035 aaPredicted RBP15.36■□□□□ 0.05
LDB3-202ENST00000361373 KRT13P13646 458 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 RRAGBQ5VZM2 374 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 DPP8Q6V1X1 898 aaPredicted RBP15.36■□□□□ 0.05
LDB3-202ENST00000361373 BICD1Q96G01 975 aa15.36■□□□□ 0.05
LDB3-202ENST00000361373 PTPDC1A2A3K4 754 aa15.35■□□□□ 0.05
LDB3-202ENST00000361373 EZRP15311 586 aaKnown RBP15.35■□□□□ 0.05
LDB3-202ENST00000361373 LIG1P18858 919 aa15.35■□□□□ 0.05
LDB3-202ENST00000361373 IBSPP21815 317 aaPredicted RBP15.35■□□□□ 0.05
LDB3-202ENST00000361373 NAA15Q9BXJ9 866 aaKnown RBP15.35■□□□□ 0.05
LDB3-202ENST00000361373 FBXO3Q9UK99 471 aa15.35■□□□□ 0.05
LDB3-202ENST00000361373 BLMP54132 1417 aaPredicted RBP15.35■□□□□ 0.05
LDB3-202ENST00000361373 TMC6Q7Z403 805 aa15.35■□□□□ 0.05
LDB3-202ENST00000361373 FERMT2Q96AC1 680 aa15.35■□□□□ 0.05
LDB3-202ENST00000361373 LLPHQ9BRT6 129 aaKnown RBP15.35■□□□□ 0.05
LDB3-202ENST00000361373 CRACR2AQ9BSW2 395 aa15.35■□□□□ 0.05
LDB3-202ENST00000361373 KDM5AP29375 1690 aaKnown RBP15.35■□□□□ 0.05
LDB3-202ENST00000361373 SUCLG2Q96I99 432 aa15.35■□□□□ 0.05
LDB3-202ENST00000361373 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.35■□□□□ 0.05
LDB3-202ENST00000361373 APOBRQ0VD83 1088 aa15.34■□□□□ 0.05
LDB3-202ENST00000361373 LRSAM1Q6UWE0 723 aa15.34■□□□□ 0.05
LDB3-202ENST00000361373 LUZP1Q86V48 1076 aa15.34■□□□□ 0.05
LDB3-202ENST00000361373 UGGT1Q9NYU2 1555 aa15.34■□□□□ 0.05
LDB3-202ENST00000361373 ANKRD62A6NC57 917 aa15.34■□□□□ 0.05
LDB3-202ENST00000361373 CPLX3Q8WVH0 158 aa15.34■□□□□ 0.05
LDB3-202ENST00000361373 FAM200AQ8TCP9 573 aa15.34■□□□□ 0.05
LDB3-202ENST00000361373 CARD10Q9BWT7 1032 aa15.34■□□□□ 0.05
LDB3-202ENST00000361373 TBC1D5Q92609 795 aa15.34■□□□□ 0.05
LDB3-202ENST00000361373 TAOK3Q9H2K8 898 aa15.34■□□□□ 0.05
LDB3-202ENST00000361373 ARHGEF10LQ9HCE6 1279 aa15.34■□□□□ 0.05
LDB3-202ENST00000361373 PPP1R2P41236 205 aa15.33■□□□□ 0.05
LDB3-202ENST00000361373 ASIC1P78348 528 aa15.33■□□□□ 0.05
LDB3-202ENST00000361373 TMEM87AQ8NBN3 555 aa15.33■□□□□ 0.05
LDB3-202ENST00000361373 POTEB2H3BUK9 544 aa15.33■□□□□ 0.04
LDB3-202ENST00000361373 URI1O94763 535 aaPredicted RBP15.33■□□□□ 0.04
LDB3-202ENST00000361373 MYCNP04198 464 aaPredicted RBP15.33■□□□□ 0.04
LDB3-202ENST00000361373 SPAG5Q96R06 1193 aa15.33■□□□□ 0.04
LDB3-202ENST00000361373 PLVAPQ9BX97 442 aa15.33■□□□□ 0.04
LDB3-202ENST00000361373 GOLGA6L7A0A1B0GV03 622 aa15.33■□□□□ 0.04
LDB3-202ENST00000361373 PPFIA3O75145 1194 aa15.33■□□□□ 0.04
LDB3-202ENST00000361373 RBM26Q5T8P6 1007 aaKnown RBP15.33■□□□□ 0.04
LDB3-202ENST00000361373 TMCO3Q6UWJ1 677 aa15.33■□□□□ 0.04
LDB3-202ENST00000361373 DTHD1Q6ZMT9 781 aa15.33■□□□□ 0.04
LDB3-202ENST00000361373 TSPYL1Q9H0U9 437 aa15.33■□□□□ 0.04
LDB3-202ENST00000361373 METP08581 1390 aa15.33■□□□□ 0.04
LDB3-202ENST00000361373 IBTKQ9P2D0 1353 aaPredicted RBP15.33■□□□□ 0.04
LDB3-202ENST00000361373 BICDL2A1A5D9 508 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 NEURL1BA8MQ27 555 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 ADCY5O95622 1261 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 EIF6P56537 245 aaKnown RBP15.32■□□□□ 0.04
LDB3-202ENST00000361373 NCBP1Q09161 790 aaKnown RBP15.32■□□□□ 0.04
LDB3-202ENST00000361373 RILPL1Q5EBL4 403 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 USP48Q86UV5 1035 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 IQUBQ8NA54 791 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 DEXIO95424 95 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 RPS6KB1P23443 525 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 USP8P40818 1118 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 RPS8P62241 208 aaKnown RBP15.32■□□□□ 0.04
LDB3-202ENST00000361373 CNPY2Q9Y2B0 182 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 SPATA31E1Q6ZUB1 1445 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 HS2ST1Q7LGA3 356 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 FERMT1Q9BQL6 677 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 AFMP43652 599 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 IL17REQ8NFR9 667 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 CENPHQ9H3R5 247 aa15.32■□□□□ 0.04
LDB3-202ENST00000361373 ANGEL1Q9UNK9 670 aaKnown RBP15.32■□□□□ 0.04
LDB3-202ENST00000361373 GPAA1O43292 621 aa15.31■□□□□ 0.04
LDB3-202ENST00000361373 AKR1B10O60218 316 aa15.31■□□□□ 0.04
LDB3-202ENST00000361373 ARHGEF25Q86VW2 580 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms