RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 RMI1Q9H9A7 625 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 MYO6Q9UM54 1294 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
SIN3A-201ENST00000360439 LRRC7Q96NW7 1537 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 CASTP20810 708 aaKnown RBP11.42□□□□□ -0.58
SIN3A-201ENST00000360439 PDE6BP35913 854 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 JAKMIP1Q96N16 626 aaKnown RBP11.42□□□□□ -0.58
SIN3A-201ENST00000360439 SNRKQ9NRH2 765 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 TTC41PQ6P2S7 1318 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 IGSF1Q8N6C5 1336 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 SH3TC1Q8TE82 1336 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 F8W031 263 aaPredicted RBP11.42□□□□□ -0.58
SIN3A-201ENST00000360439 ALDH1L1O75891 902 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 KIF4AO95239 1232 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 CLNS1AP54105 237 aaKnown RBP11.42□□□□□ -0.58
SIN3A-201ENST00000360439 FBXO41Q8TF61 875 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 AIDAQ96BJ3 306 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 SHPRHQ149N8 1683 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 GSPT1P15170 499 aaKnown RBP11.42□□□□□ -0.58
SIN3A-201ENST00000360439 EIF4A1P60842 406 aaKnown RBP11.42□□□□□ -0.58
SIN3A-201ENST00000360439 PARP10Q53GL7 1025 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 LARP1BQ659C4 914 aaKnown RBP11.42□□□□□ -0.58
SIN3A-201ENST00000360439 BCS1LQ9Y276 419 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 A0A1B0GUA9 196 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 SMC2O95347 1197 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 USP5P45974 858 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 PLBD2Q8NHP8 589 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 EVI5LQ96CN4 794 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 CFAP45Q9UL16 551 aa11.42□□□□□ -0.58
SIN3A-201ENST00000360439 FRMD3A2A2Y4 597 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 RBM17Q96I25 401 aaKnown RBP11.41□□□□□ -0.58
SIN3A-201ENST00000360439 RBM27Q9P2N5 1060 aaKnown RBP11.41□□□□□ -0.58
SIN3A-201ENST00000360439 PREX1Q8TCU6 1659 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 SPATA31D1Q6ZQQ2 1576 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 CRKLP46109 303 aaKnown RBP11.41□□□□□ -0.58
SIN3A-201ENST00000360439 BLOC1S2Q6QNY1 142 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 PIGBQ92521 554 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 OSBPL3Q9H4L5 887 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 TCEAL9Q9UHQ7 104 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 GYS2P54840 703 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 EN1Q05925 392 aaPredicted RBP11.41□□□□□ -0.58
SIN3A-201ENST00000360439 GRM1Q13255 1194 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 USPL1Q5W0Q7 1092 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 G2E3Q7L622 706 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 CRACR2BQ8N4Y2 399 aaPredicted RBP11.41□□□□□ -0.58
SIN3A-201ENST00000360439 OGFOD1Q8N543 542 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 C16orf45Q96MC5 204 aaPredicted RBP11.41□□□□□ -0.58
SIN3A-201ENST00000360439 TRIM5Q9C035 493 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 DDX19AQ9NUU7 478 aaKnown RBP11.41□□□□□ -0.58
SIN3A-201ENST00000360439 RICTORQ6R327 1708 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 IFT172Q9UG01 1749 aa11.41□□□□□ -0.58
SIN3A-201ENST00000360439 CWC27Q6UX04 472 aaKnown RBP11.41□□□□□ -0.58
SIN3A-201ENST00000360439 CHMLP26374 656 aa11.4□□□□□ -0.58
SIN3A-201ENST00000360439 VPS72Q15906 364 aa11.4□□□□□ -0.58
SIN3A-201ENST00000360439 TAX1BP1Q86VP1 789 aa11.4□□□□□ -0.58
SIN3A-201ENST00000360439 C16orf71Q8IYS4 520 aaPredicted RBP11.4□□□□□ -0.58
SIN3A-201ENST00000360439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.4□□□□□ -0.58
SIN3A-201ENST00000360439 RAD51AP2Q09MP3 1159 aa11.4□□□□□ -0.58
SIN3A-201ENST00000360439 MAP3K12Q12852 859 aa11.4□□□□□ -0.58
SIN3A-201ENST00000360439 ARMC9Q7Z3E5 817 aa11.4□□□□□ -0.58
SIN3A-201ENST00000360439 NBPF3Q9H094 633 aa11.4□□□□□ -0.58
SIN3A-201ENST00000360439 FEZ2Q9UHY8 353 aaPredicted RBP11.4□□□□□ -0.58
SIN3A-201ENST00000360439 NEMFO60524 1076 aa11.4□□□□□ -0.58
SIN3A-201ENST00000360439 NLGN1Q8N2Q7 840 aa11.4□□□□□ -0.58
SIN3A-201ENST00000360439 SPATA32Q96LK8 384 aa11.4□□□□□ -0.58
SIN3A-201ENST00000360439 HMG20BQ9P0W2 317 aa11.4□□□□□ -0.58
SIN3A-201ENST00000360439 HOOK1Q9UJC3 728 aaKnown RBP11.4□□□□□ -0.59
SIN3A-201ENST00000360439 CDC42BPGQ6DT37 1551 aa11.4□□□□□ -0.59
SIN3A-201ENST00000360439 GIGYF1O75420 1035 aaPredicted RBP11.39□□□□□ -0.59
SIN3A-201ENST00000360439 POLR3DP05423 398 aaPredicted RBP11.39□□□□□ -0.59
SIN3A-201ENST00000360439 PPM1EQ8WY54 764 aa11.39□□□□□ -0.59
SIN3A-201ENST00000360439 MROH1Q8NDA8 1641 aa11.39□□□□□ -0.59
SIN3A-201ENST00000360439 CTAGE5O15320 804 aa11.39□□□□□ -0.59
SIN3A-201ENST00000360439 CYP27B1O15528 508 aa11.39□□□□□ -0.59
SIN3A-201ENST00000360439 GJA3Q9Y6H8 435 aa11.39□□□□□ -0.59
SIN3A-201ENST00000360439 SOS2Q07890 1332 aaPredicted RBP11.39□□□□□ -0.59
SIN3A-201ENST00000360439 KCNQ2O43526 872 aa11.39□□□□□ -0.59
SIN3A-201ENST00000360439 ARHGEF28Q8N1W1 1705 aaKnown RBP11.39□□□□□ -0.59
SIN3A-201ENST00000360439 KIF2AO00139 706 aaPredicted RBP11.39□□□□□ -0.59
SIN3A-201ENST00000360439 PSEN1P49768 467 aa11.39□□□□□ -0.59
SIN3A-201ENST00000360439 TRIM29Q14134 588 aa11.39□□□□□ -0.59
SIN3A-201ENST00000360439 KIF18AQ8NI77 898 aa11.39□□□□□ -0.59
SIN3A-201ENST00000360439 UPF3BQ9BZI7 483 aaKnown RBP11.39□□□□□ -0.59
SIN3A-201ENST00000360439 RBSNQ9H1K0 784 aa11.39□□□□□ -0.59
SIN3A-201ENST00000360439 ZBTB1Q9Y2K1 713 aa11.39□□□□□ -0.59
SIN3A-201ENST00000360439 RAD50Q92878 1312 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 PPP1R12AO14974 1030 aaPredicted RBP11.38□□□□□ -0.59
SIN3A-201ENST00000360439 KINO60870 393 aaKnown RBP11.38□□□□□ -0.59
SIN3A-201ENST00000360439 ADCY5O95622 1261 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 ZSCAN26Q16670 478 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 USP48Q86UV5 1035 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 ZGPATQ8N5A5 531 aaKnown RBP11.38□□□□□ -0.59
SIN3A-201ENST00000360439 RGS12O14924 1447 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 MYO1BO43795 1136 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 HOXB7P09629 217 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 SLF2Q8IX21 1173 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 RHPN1Q8TCX5 695 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 ECHDC1Q9NTX5 307 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 DONSONQ9NYP3 566 aa11.38□□□□□ -0.59
SIN3A-201ENST00000360439 COL3A1P02461 1466 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms