RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 DOK7Q18PE1 504 aa15.16■□□□□ 0.02
NIF3L1-201ENST00000359683 PODNQ7Z5L7 613 aa15.16■□□□□ 0.02
NIF3L1-201ENST00000359683 LARGE2Q8N3Y3 721 aa15.16■□□□□ 0.02
NIF3L1-201ENST00000359683 PI4K2BQ8TCG2 481 aa15.16■□□□□ 0.02
NIF3L1-201ENST00000359683 RNF181Q9P0P0 153 aa15.16■□□□□ 0.02
NIF3L1-201ENST00000359683 CEP350Q5VT06 3117 aa15.15■□□□□ 0.02
NIF3L1-201ENST00000359683 SEMA3EO15041 775 aa15.15■□□□□ 0.02
NIF3L1-201ENST00000359683 ERC2O15083 957 aa15.15■□□□□ 0.02
NIF3L1-201ENST00000359683 TSHZ3Q63HK5 1081 aa15.15■□□□□ 0.02
NIF3L1-201ENST00000359683 G3V3G9 751 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 GLRX3O76003 335 aaKnown RBP15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 LMNB1P20700 586 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 MCAMP43121 646 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 SCARF1Q14162 830 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 DCAF8Q5TAQ9 597 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 DBNDD1Q9H9R9 158 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 ECE2O60344 883 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 TOMM70O94826 608 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 RASGRF1Q13972 1273 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 HAUS7Q99871 368 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 BOLA2Q9H3K6 86 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 HMG20BQ9P0W2 317 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 DENND2AQ9ULE3 1009 aa15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 IQSEC3Q9UPP2 1182 aaPredicted RBP15.14■□□□□ 0.01
NIF3L1-201ENST00000359683 COL4A5P29400 1685 aa15.13■□□□□ 0.01
NIF3L1-201ENST00000359683 PDS5AQ29RF7 1337 aaKnown RBP15.13■□□□□ 0.01
NIF3L1-201ENST00000359683 RGS3P49796 1198 aa15.13■□□□□ 0.01
NIF3L1-201ENST00000359683 NIM1KQ8IY84 436 aa15.13■□□□□ 0.01
NIF3L1-201ENST00000359683 JDP2Q8WYK2 163 aa15.13■□□□□ 0.01
NIF3L1-201ENST00000359683 ZNRF3Q9ULT6 936 aa15.13■□□□□ 0.01
NIF3L1-201ENST00000359683 FAM205AQ6ZU69 1335 aa15.12■□□□□ 0.01
NIF3L1-201ENST00000359683 AKAP11Q9UKA4 1901 aa15.12■□□□□ 0.01
NIF3L1-201ENST00000359683 YDJCA8MPS7 323 aa15.12■□□□□ 0.01
NIF3L1-201ENST00000359683 FRAT2O75474 233 aaPredicted RBP15.12■□□□□ 0.01
NIF3L1-201ENST00000359683 SPATA5Q8NB90 893 aa15.12■□□□□ 0.01
NIF3L1-201ENST00000359683 DICER1Q9UPY3 1922 aaKnown RBP15.11■□□□□ 0.01
NIF3L1-201ENST00000359683 PI16Q6UXB8 463 aa15.11■□□□□ 0.01
NIF3L1-201ENST00000359683 KCNQ5Q9NR82 932 aa15.11■□□□□ 0.01
NIF3L1-201ENST00000359683 SNRKQ9NRH2 765 aa15.11■□□□□ 0.01
NIF3L1-201ENST00000359683 COL1A1P02452 1464 aaPredicted RBP15.1■□□□□ 0.01
NIF3L1-201ENST00000359683 FZD9O00144 591 aa15.1■□□□□ 0.01
NIF3L1-201ENST00000359683 ZAP70P43403 619 aa15.1■□□□□ 0.01
NIF3L1-201ENST00000359683 TTC22Q5TAA0 569 aa15.1■□□□□ 0.01
NIF3L1-201ENST00000359683 TTLL5Q6EMB2 1281 aa15.1■□□□□ 0.01
NIF3L1-201ENST00000359683 CYP2E1P05181 493 aaPredicted RBP15.1■□□□□ 0.01
NIF3L1-201ENST00000359683 APLP1P51693 650 aa15.1■□□□□ 0.01
NIF3L1-201ENST00000359683 GTF2IP78347 998 aa15.1■□□□□ 0.01
NIF3L1-201ENST00000359683 STRIP1Q5VSL9 837 aa15.1■□□□□ 0.01
NIF3L1-201ENST00000359683 WDR66Q8TBY9 1149 aa15.1■□□□□ 0.01
NIF3L1-201ENST00000359683 NDUFB9Q9Y6M9 179 aa15.1■□□□□ 0.01
NIF3L1-201ENST00000359683 SCN9AQ15858 1988 aa15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 SALL1Q9NSC2 1324 aa15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 USP17L3A6NCW0 530 aa15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 USP17L4A6NCW7 530 aa15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 GSPT1P15170 499 aaKnown RBP15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 FKBP1AP62942 108 aaKnown RBP15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 CXCL9Q07325 125 aa15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 CHAF1AQ13111 956 aaPredicted RBP15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 USP17L1Q7RTZ2 530 aa15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 RBM46Q8TBY0 533 aaKnown RBP15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 DNAJC2Q99543 621 aaKnown RBP15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 PAG1Q9NWQ8 432 aa15.09■□□□□ 0.01
NIF3L1-201ENST00000359683 DACT2Q5SW24 774 aa15.08■□□□□ 0
NIF3L1-201ENST00000359683 TBC1D22AQ8WUA7 517 aa15.08■□□□□ 0
NIF3L1-201ENST00000359683 EDC3Q96F86 508 aaKnown RBP15.08■□□□□ 0
NIF3L1-201ENST00000359683 ANTXR1Q9H6X2 564 aa15.08■□□□□ 0
NIF3L1-201ENST00000359683 ZC3H4Q9UPT8 1303 aaKnown RBP15.08■□□□□ 0
NIF3L1-201ENST00000359683 MYH13Q9UKX3 1938 aa15.08■□□□□ 0
NIF3L1-201ENST00000359683 GOLIM4O00461 696 aa15.07■□□□□ 0
NIF3L1-201ENST00000359683 RAD17O75943 681 aa15.07■□□□□ 0
NIF3L1-201ENST00000359683 VIL1P09327 827 aaKnown RBP15.07■□□□□ 0
NIF3L1-201ENST00000359683 TTF1Q15361 905 aaPredicted RBP15.07■□□□□ 0
NIF3L1-201ENST00000359683 BMP2KLQ5H9B9 411 aa15.07■□□□□ 0
NIF3L1-201ENST00000359683 TBC1D9Q6ZT07 1266 aa15.07■□□□□ 0
NIF3L1-201ENST00000359683 EVI5LQ96CN4 794 aa15.07■□□□□ 0
NIF3L1-201ENST00000359683 PIH1D3Q9NQM4 214 aaKnown RBP15.07■□□□□ 0
NIF3L1-201ENST00000359683 JAG2Q9Y219 1238 aa15.07■□□□□ 0
NIF3L1-201ENST00000359683 MAP4K4O95819 1239 aaPredicted RBP15.06■□□□□ 0
NIF3L1-201ENST00000359683 EIF6P56537 245 aaKnown RBP15.06■□□□□ 0
NIF3L1-201ENST00000359683 CIAPIN1Q6FI81 312 aa15.06■□□□□ 0
NIF3L1-201ENST00000359683 ZGPATQ8N5A5 531 aaKnown RBP15.06■□□□□ 0
NIF3L1-201ENST00000359683 RRAGCQ9HB90 399 aa15.06■□□□□ 0
NIF3L1-201ENST00000359683 PSME4Q14997 1843 aa15.06■□□□□ 0
NIF3L1-201ENST00000359683 PSMD14O00487 310 aa15.06■□□□□ 0
NIF3L1-201ENST00000359683 IGSF3O75054 1194 aa15.06■□□□□ 0
NIF3L1-201ENST00000359683 SDSP20132 328 aa15.06■□□□□ 0
NIF3L1-201ENST00000359683 TNIP1Q15025 636 aa15.06■□□□□ 0
NIF3L1-201ENST00000359683 MFSD14BQ5SR56 506 aa15.06■□□□□ 0
NIF3L1-201ENST00000359683 CERS5Q8N5B7 392 aa15.06■□□□□ 0
NIF3L1-201ENST00000359683 KBTBD3Q8NAB2 608 aa15.06■□□□□ 0
NIF3L1-201ENST00000359683 SUGT1Q9Y2Z0 365 aa15.06■□□□□ 0
NIF3L1-201ENST00000359683 ZNF646O15015 1829 aaPredicted RBP15.05■□□□□ 0
NIF3L1-201ENST00000359683 TRIM6-TRIM34B2RNG4 842 aa15.05■□□□□ -0
NIF3L1-201ENST00000359683 SPTY2D1Q68D10 685 aaPredicted RBP15.05■□□□□ -0
NIF3L1-201ENST00000359683 RSBN1LQ6PCB5 846 aaPredicted RBP15.05■□□□□ -0
NIF3L1-201ENST00000359683 TICAM2Q86XR7 235 aa15.05■□□□□ -0
NIF3L1-201ENST00000359683 CNTROBQ8N137 903 aa15.05■□□□□ -0
NIF3L1-201ENST00000359683 FBXW7Q969H0 707 aa15.05■□□□□ -0
NIF3L1-201ENST00000359683 MXD3Q9BW11 206 aa15.05■□□□□ -0
NIF3L1-201ENST00000359683 ABCF2Q9UG63 623 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms