RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 KCNJ4P48050 445 aa12.92□□□□□ -0.34
TRAPPC4-201ENST00000359005 CWC27Q6UX04 472 aaKnown RBP12.92□□□□□ -0.34
TRAPPC4-201ENST00000359005 ANKRD18AQ8IVF6 992 aa12.92□□□□□ -0.34
TRAPPC4-201ENST00000359005 CCDC85AQ96PX6 553 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC4-201ENST00000359005 DBNDD2Q9BQY9 259 aa12.92□□□□□ -0.34
TRAPPC4-201ENST00000359005 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRAPPC4-201ENST00000359005 PAG1Q9NWQ8 432 aa12.92□□□□□ -0.34
TRAPPC4-201ENST00000359005 WTIPA6NIX2 430 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-201ENST00000359005 PPIP5K2O43314 1243 aa12.91□□□□□ -0.34
TRAPPC4-201ENST00000359005 EPS15P42566 896 aa12.91□□□□□ -0.34
TRAPPC4-201ENST00000359005 SCNN1DP51172 638 aa12.91□□□□□ -0.34
TRAPPC4-201ENST00000359005 MPNDQ8N594 471 aa12.91□□□□□ -0.34
TRAPPC4-201ENST00000359005 KBTBD3Q8NAB2 608 aa12.91□□□□□ -0.34
TRAPPC4-201ENST00000359005 JDP2Q8WYK2 163 aa12.91□□□□□ -0.34
TRAPPC4-201ENST00000359005 GPR101Q96P66 508 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC4-201ENST00000359005 DNAJC2Q99543 621 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-201ENST00000359005 GNL3LQ9NVN8 582 aaKnown RBP12.91□□□□□ -0.34
TRAPPC4-201ENST00000359005 GJA3Q9Y6H8 435 aa12.91□□□□□ -0.34
TRAPPC4-201ENST00000359005 YDJCA8MPS7 323 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 ITGBL1O95965 494 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 EPHX2P34913 555 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 TIMM10P62072 90 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 GPSM2P81274 684 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 CXCL9Q07325 125 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 DPP8Q6V1X1 898 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 GPC2Q8N158 579 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 XAGE2Q96GT9 111 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 TBC1D2Q9BYX2 928 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 ANKRD2Q9GZV1 360 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 HELLSQ9NRZ9 838 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 TLR7Q9NYK1 1049 aaKnown RBP12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 POLLQ9UGP5 575 aa12.9□□□□□ -0.34
TRAPPC4-201ENST00000359005 DDX60Q8IY21 1712 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 WDR90Q96KV7 1748 aa12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 SHTN1A0MZ66 631 aa12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 K7ELQ4 463 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 PSMA5P28066 241 aa12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 HSPA4P34932 840 aa12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 RPS8P62241 208 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 FMR1Q06787 632 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 KRT32Q14532 448 aa12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 EAPPQ56P03 285 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 KLRG1Q96E93 195 aa12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 PUS3Q9BZE2 481 aaKnown RBP12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 KCNQ5Q9NR82 932 aa12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 SNRKQ9NRH2 765 aa12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 BSDC1Q9NW68 430 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 HMG20BQ9P0W2 317 aa12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 HACL1Q9UJ83 578 aa12.89□□□□□ -0.35
TRAPPC4-201ENST00000359005 EIF6P56537 245 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-201ENST00000359005 KIAA2012Q0VF49 1180 aa12.88□□□□□ -0.35
TRAPPC4-201ENST00000359005 MCMDC2Q4G0Z9 681 aa12.88□□□□□ -0.35
TRAPPC4-201ENST00000359005 GRIPAP1Q4V328 841 aa12.88□□□□□ -0.35
TRAPPC4-201ENST00000359005 MAP1SQ66K74 1059 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-201ENST00000359005 NSFL1CQ9UNZ2 370 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-201ENST00000359005 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
TRAPPC4-201ENST00000359005 CCDC171Q6TFL3 1326 aa12.88□□□□□ -0.35
TRAPPC4-201ENST00000359005 CCDC88AQ3V6T2 1871 aa12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 IQCA1LA6NCM1 817 aa12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 GOLIM4O00461 696 aa12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 IGSF3O75054 1194 aa12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 RAD17O75943 681 aa12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 NMIQ13287 307 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 UBE4AQ14139 1066 aa12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 TMED8Q6PL24 325 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 LDHDQ86WU2 507 aa12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 NIM1KQ8IY84 436 aa12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 ZNRF3Q9ULT6 936 aa12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 CIZ1Q9ULV3 898 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 PASKQ96RG2 1323 aa12.87□□□□□ -0.35
TRAPPC4-201ENST00000359005 TIAM2Q8IVF5 1701 aa12.86□□□□□ -0.35
TRAPPC4-201ENST00000359005 RIMBP2O15034 1052 aa12.86□□□□□ -0.35
TRAPPC4-201ENST00000359005 RNF113AO15541 343 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-201ENST00000359005 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
TRAPPC4-201ENST00000359005 TMC4Q7Z404 712 aa12.86□□□□□ -0.35
TRAPPC4-201ENST00000359005 VGLL2Q8N8G2 317 aa12.86□□□□□ -0.35
TRAPPC4-201ENST00000359005 JMYQ8N9B5 988 aa12.86□□□□□ -0.35
TRAPPC4-201ENST00000359005 TM6SF1Q9BZW5 370 aa12.86□□□□□ -0.35
TRAPPC4-201ENST00000359005 LSG1Q9H089 658 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-201ENST00000359005 CLEC11AQ9Y240 323 aa12.86□□□□□ -0.35
TRAPPC4-201ENST00000359005 ARAP2Q8WZ64 1704 aa12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 ARID4AP29374 1257 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 GMPSP49915 693 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 NEK4P51957 841 aa12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 HIRAP54198 1017 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 TBC1D16Q8TBP0 767 aa12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 MAP4K1Q92918 833 aa12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 CHMP4CQ96CF2 233 aa12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 KIF2CQ99661 725 aa12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 TMX4Q9H1E5 349 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 VPS33BQ9H267 617 aa12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 DBNDD1Q9H9R9 158 aa12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 CWC22Q9HCG8 908 aaKnown RBP12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 CHMP5Q9NZZ3 219 aa12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 CTNNA3Q9UI47 895 aa12.85□□□□□ -0.35
TRAPPC4-201ENST00000359005 ZBTB12Q9Y330 459 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms