RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ME3Q16798 604 aa15.05■□□□□ 0
GGPS1-202ENST00000358966 TPTE2Q6XPS3 522 aa15.05■□□□□ 0
GGPS1-202ENST00000358966 SPATA5Q8NB90 893 aa15.05■□□□□ 0
GGPS1-202ENST00000358966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.05■□□□□ 0
GGPS1-202ENST00000358966 NLRP3Q96P20 1036 aa15.05■□□□□ 0
GGPS1-202ENST00000358966 CIZ1Q9ULV3 898 aaPredicted RBP15.05■□□□□ 0
GGPS1-202ENST00000358966 PPFIA3O75145 1194 aa15.05■□□□□ -0
GGPS1-202ENST00000358966 CUL4AQ13619 759 aa15.05■□□□□ -0
GGPS1-202ENST00000358966 BLOC1S2Q6QNY1 142 aa15.05■□□□□ -0
GGPS1-202ENST00000358966 ZFP91Q96JP5 570 aaPredicted RBP15.05■□□□□ -0
GGPS1-202ENST00000358966 HELLSQ9NRZ9 838 aa15.05■□□□□ -0
GGPS1-202ENST00000358966 RFX7Q2KHR2 1363 aa15.05■□□□□ -0
GGPS1-202ENST00000358966 UBR3Q6ZT12 1888 aa15.05■□□□□ -0
GGPS1-202ENST00000358966 GYS1P13807 737 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 ARID4AP29374 1257 aaPredicted RBP15.04■□□□□ -0
GGPS1-202ENST00000358966 ZNF827Q17R98 1081 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 RNF20Q5VTR2 975 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 MAP7D2Q96T17 732 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 DENND2AQ9ULE3 1009 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 MYH7P12883 1935 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 ZNF532Q9HCE3 1301 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 FSD2A1L4K1 749 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 GPAA1O43292 621 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 PPP4R3BQ5MIZ7 849 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 GPR101Q96P66 508 aaPredicted RBP15.04■□□□□ -0
GGPS1-202ENST00000358966 TFCP2L1Q9NZI6 479 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 LIMCH1Q9UPQ0 1083 aa15.04■□□□□ -0
GGPS1-202ENST00000358966 MCM2P49736 904 aa15.03■□□□□ -0
GGPS1-202ENST00000358966 RBM6P78332 1123 aaKnown RBP15.03■□□□□ -0
GGPS1-202ENST00000358966 COL24A1Q17RW2 1714 aa15.03■□□□□ -0
GGPS1-202ENST00000358966 CARMIL3Q8ND23 1372 aa15.03■□□□□ -0
GGPS1-202ENST00000358966 RTL9Q8NET4 1388 aa15.03■□□□□ -0
GGPS1-202ENST00000358966 TOB2Q14106 344 aaPredicted RBP15.03■□□□□ -0
GGPS1-202ENST00000358966 TXNRD3Q86VQ6 643 aa15.03■□□□□ -0
GGPS1-202ENST00000358966 MAGEB6Q8N7X4 407 aa15.03■□□□□ -0
GGPS1-202ENST00000358966 CNBD1Q8NA66 436 aa15.03■□□□□ -0
GGPS1-202ENST00000358966 NKX2-3Q8TAU0 364 aa15.03■□□□□ -0
GGPS1-202ENST00000358966 NYXQ9GZU5 481 aa15.03■□□□□ -0
GGPS1-202ENST00000358966 APBA3O96018 575 aa15.02■□□□□ -0
GGPS1-202ENST00000358966 PDE6AP16499 860 aa15.02■□□□□ -0
GGPS1-202ENST00000358966 RPS6KB1P23443 525 aa15.02■□□□□ -0
GGPS1-202ENST00000358966 TM4SF1P30408 202 aa15.02■□□□□ -0
GGPS1-202ENST00000358966 ADD2P35612 726 aa15.02■□□□□ -0
GGPS1-202ENST00000358966 RPS8P62241 208 aaKnown RBP15.02■□□□□ -0
GGPS1-202ENST00000358966 DMTNQ08495 405 aa15.02■□□□□ -0
GGPS1-202ENST00000358966 UTP14CQ5TAP6 766 aaKnown RBP15.02■□□□□ -0
GGPS1-202ENST00000358966 APPBP2Q92624 585 aa15.02■□□□□ -0
GGPS1-202ENST00000358966 BSDC1Q9NW68 430 aaPredicted RBP15.02■□□□□ -0
GGPS1-202ENST00000358966 U3KPZ7 1027 aaPredicted RBP15.02■□□□□ -0
GGPS1-202ENST00000358966 COL1A1P02452 1464 aaPredicted RBP15.02■□□□□ -0
GGPS1-202ENST00000358966 SLC10A5Q5PT55 438 aa15.02□□□□□ -0.01
GGPS1-202ENST00000358966 PRR5LQ6MZQ0 368 aa15.02□□□□□ -0.01
GGPS1-202ENST00000358966 NEK1Q96PY6 1258 aa15.02□□□□□ -0.01
GGPS1-202ENST00000358966 GPHNQ9NQX3 736 aaPredicted RBP15.02□□□□□ -0.01
GGPS1-202ENST00000358966 ABCF2Q9UG63 623 aa15.02□□□□□ -0.01
GGPS1-202ENST00000358966 FGAP02671 866 aa15.01□□□□□ -0.01
GGPS1-202ENST00000358966 MIGA1Q8NAN2 632 aa15.01□□□□□ -0.01
GGPS1-202ENST00000358966 TM6SF1Q9BZW5 370 aa15.01□□□□□ -0.01
GGPS1-202ENST00000358966 BAG4O95429 457 aaKnown RBP15.01□□□□□ -0.01
GGPS1-202ENST00000358966 HSP90B1P14625 803 aaKnown RBP15.01□□□□□ -0.01
GGPS1-202ENST00000358966 DDR1Q08345 913 aa15.01□□□□□ -0.01
GGPS1-202ENST00000358966 MCTP1Q6DN14 999 aa15.01□□□□□ -0.01
GGPS1-202ENST00000358966 STK11IPQ8N1F8 1099 aa15.01□□□□□ -0.01
GGPS1-202ENST00000358966 ARAP2Q8WZ64 1704 aa15.01□□□□□ -0.01
GGPS1-202ENST00000358966 LAMA4Q16363 1823 aa15.01□□□□□ -0.01
GGPS1-202ENST00000358966 DSCC1Q9BVC3 393 aa15.01□□□□□ -0.01
GGPS1-202ENST00000358966 A0A1B0GUL6 1792 aa15□□□□□ -0.01
GGPS1-202ENST00000358966 APPP05067 770 aa15□□□□□ -0.01
GGPS1-202ENST00000358966 UQCRFS1P1P0C7P4 283 aa15□□□□□ -0.01
GGPS1-202ENST00000358966 TPRNQ4KMQ1 711 aa15□□□□□ -0.01
GGPS1-202ENST00000358966 Q6ZUG5 572 aa15□□□□□ -0.01
GGPS1-202ENST00000358966 ADGRA1Q86SQ6 560 aa15□□□□□ -0.01
GGPS1-202ENST00000358966 INCENPQ9NQS7 918 aa15□□□□□ -0.01
GGPS1-202ENST00000358966 TCRBV5S4A2TA0A5A2 114 aa15□□□□□ -0.01
GGPS1-202ENST00000358966 E7EWF7 191 aa15□□□□□ -0.01
GGPS1-202ENST00000358966 PSMA5P28066 241 aa15□□□□□ -0.01
GGPS1-202ENST00000358966 MSL1Q68DK7 614 aa15□□□□□ -0.01
GGPS1-202ENST00000358966 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
GGPS1-202ENST00000358966 DDX24Q9GZR7 859 aaKnown RBP eCLIP15□□□□□ -0.01
GGPS1-202ENST00000358966 CWC22Q9HCG8 908 aaKnown RBP15□□□□□ -0.01
GGPS1-202ENST00000358966 RGS17Q9UGC6 210 aaPredicted RBP15□□□□□ -0.01
GGPS1-202ENST00000358966 PRKAB2O43741 272 aa14.99□□□□□ -0.01
GGPS1-202ENST00000358966 BRD2P25440 801 aaKnown RBP14.99□□□□□ -0.01
GGPS1-202ENST00000358966 VPS37DQ86XT2 251 aa14.99□□□□□ -0.01
GGPS1-202ENST00000358966 ANP32BQ92688 251 aaKnown RBP14.99□□□□□ -0.01
GGPS1-202ENST00000358966 BRF1Q92994 677 aa14.99□□□□□ -0.01
GGPS1-202ENST00000358966 ZNF512BQ96KM6 892 aaPredicted RBP14.99□□□□□ -0.01
GGPS1-202ENST00000358966 FAM84BQ96KN1 310 aaPredicted RBP14.99□□□□□ -0.01
GGPS1-202ENST00000358966 ARMT1Q9H993 441 aa14.99□□□□□ -0.01
GGPS1-202ENST00000358966 TRAK2O60296 914 aa14.99□□□□□ -0.01
GGPS1-202ENST00000358966 SERPINB2P05120 415 aa14.99□□□□□ -0.01
GGPS1-202ENST00000358966 RAB11FIP4Q86YS3 637 aa14.99□□□□□ -0.01
GGPS1-202ENST00000358966 SMIM22K7EJ46 135 aa14.98□□□□□ -0.01
GGPS1-202ENST00000358966 MBD4O95243 580 aa14.98□□□□□ -0.01
GGPS1-202ENST00000358966 ZFYP08048 801 aaPredicted RBP14.98□□□□□ -0.01
GGPS1-202ENST00000358966 NUCB2P80303 420 aa14.98□□□□□ -0.01
GGPS1-202ENST00000358966 SLC27A3Q5K4L6 730 aa14.98□□□□□ -0.01
GGPS1-202ENST00000358966 POTEAQ6S8J7 498 aa14.98□□□□□ -0.01
GGPS1-202ENST00000358966 GBP4Q96PP9 640 aa14.98□□□□□ -0.01
GGPS1-202ENST00000358966 GDPD2Q9HCC8 539 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms