RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 SCARF1Q14162 830 aa20.79■□□□□ 0.92
CDK11A-204ENST00000358779 ZNF330Q9Y3S2 320 aaPredicted RBP20.79■□□□□ 0.92
CDK11A-204ENST00000358779 RIOK3O14730 519 aaKnown RBP20.79■□□□□ 0.92
CDK11A-204ENST00000358779 APPBP2Q92624 585 aa20.79■□□□□ 0.92
CDK11A-204ENST00000358779 ABCC12Q96J65 1359 aa20.79■□□□□ 0.92
CDK11A-204ENST00000358779 PRC1O43663 620 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 PCCAP05165 728 aaPredicted RBP20.78■□□□□ 0.92
CDK11A-204ENST00000358779 CCDC144BQ3MJ40 725 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 TAF7LQ5H9L4 462 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 BRINP3Q76B58 766 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 CCDC144CPQ8IYA2 1237 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 MB21D2Q8IYB1 491 aaPredicted RBP20.78■□□□□ 0.92
CDK11A-204ENST00000358779 CCDC85AQ96PX6 553 aaPredicted RBP20.78■□□□□ 0.92
CDK11A-204ENST00000358779 RTEL1Q9NZ71 1219 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 RIC1Q4ADV7 1423 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 C4AP0C0L4 1744 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 C4BP0C0L5 1744 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.78■□□□□ 0.92
CDK11A-204ENST00000358779 FGAP02671 866 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 ZAP70P43403 619 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 HSP90AB3PQ58FF7 597 aa20.78■□□□□ 0.92
CDK11A-204ENST00000358779 MRPS27Q92552 414 aaKnown RBP20.78■□□□□ 0.92
CDK11A-204ENST00000358779 TRIM28Q13263 835 aaKnown RBP20.77■□□□□ 0.92
CDK11A-204ENST00000358779 MRFAP1L1Q96HT8 127 aa20.77■□□□□ 0.92
CDK11A-204ENST00000358779 ARID3AQ99856 593 aa20.77■□□□□ 0.92
CDK11A-204ENST00000358779 CARD10Q9BWT7 1032 aa20.77■□□□□ 0.92
CDK11A-204ENST00000358779 PLA2G12BQ9BX93 195 aa20.77■□□□□ 0.92
CDK11A-204ENST00000358779 BCL2L12Q9HB09 334 aa20.77■□□□□ 0.92
CDK11A-204ENST00000358779 ANO10Q9NW15 660 aa20.77■□□□□ 0.92
CDK11A-204ENST00000358779 PCDHA7Q9UN72 937 aa20.77■□□□□ 0.92
CDK11A-204ENST00000358779 KLF18A0A0U1RQI7 1052 aa20.77■□□□□ 0.92
CDK11A-204ENST00000358779 FAM177BA6PVY3 158 aa20.77■□□□□ 0.92
CDK11A-204ENST00000358779 GOLGA8BA8MQT2 603 aa20.77■□□□□ 0.92
CDK11A-204ENST00000358779 CACTINQ8WUQ7 758 aaKnown RBP20.77■□□□□ 0.92
CDK11A-204ENST00000358779 FAM89AQ96GI7 184 aa20.77■□□□□ 0.92
CDK11A-204ENST00000358779 PUS7LQ9H0K6 701 aaKnown RBP20.77■□□□□ 0.92
CDK11A-204ENST00000358779 IFIT5Q13325 482 aaKnown RBP20.76■□□□□ 0.91
CDK11A-204ENST00000358779 OTUD7BQ6GQQ9 843 aa20.76■□□□□ 0.91
CDK11A-204ENST00000358779 KIF6Q6ZMV9 814 aa20.76■□□□□ 0.91
CDK11A-204ENST00000358779 C8orf76Q96K31 380 aa20.76■□□□□ 0.91
CDK11A-204ENST00000358779 AKAP11Q9UKA4 1901 aa20.76■□□□□ 0.91
CDK11A-204ENST00000358779 BECN2A8MW95 431 aa20.76■□□□□ 0.91
CDK11A-204ENST00000358779 ANTXR2P58335 489 aa20.76■□□□□ 0.91
CDK11A-204ENST00000358779 DHX40Q8IX18 779 aaKnown RBP20.76■□□□□ 0.91
CDK11A-204ENST00000358779 FMR1NBQ8N0W7 255 aaPredicted RBP20.76■□□□□ 0.91
CDK11A-204ENST00000358779 NCOA7Q8NI08 942 aa20.76■□□□□ 0.91
CDK11A-204ENST00000358779 HPS5Q9UPZ3 1129 aa20.76■□□□□ 0.91
CDK11A-204ENST00000358779 A0A087WWV3 80 aa20.75■□□□□ 0.91
CDK11A-204ENST00000358779 A0A1W2PQ27 194 aa20.75■□□□□ 0.91
CDK11A-204ENST00000358779 A0A1W2PQ64 194 aa20.75■□□□□ 0.91
CDK11A-204ENST00000358779 A0A1W2PQD8 194 aa20.75■□□□□ 0.91
CDK11A-204ENST00000358779 DHX16O60231 1041 aaKnown RBP20.75■□□□□ 0.91
CDK11A-204ENST00000358779 CSF1RP07333 972 aa20.75■□□□□ 0.91
CDK11A-204ENST00000358779 ADALQ6DHV7 355 aa20.75■□□□□ 0.91
CDK11A-204ENST00000358779 PI16Q6UXB8 463 aa20.75■□□□□ 0.91
CDK11A-204ENST00000358779 RALYLQ86SE5 291 aaKnown RBP20.75■□□□□ 0.91
CDK11A-204ENST00000358779 CEP57L1Q8IYX8 460 aa20.75■□□□□ 0.91
CDK11A-204ENST00000358779 ZBTB38Q8NAP3 1195 aaPredicted RBP20.75■□□□□ 0.91
CDK11A-204ENST00000358779 LINC00301Q8NCQ3 95 aa20.75■□□□□ 0.91
CDK11A-204ENST00000358779 C16orf45Q96MC5 204 aaPredicted RBP20.75■□□□□ 0.91
CDK11A-204ENST00000358779 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
CDK11A-204ENST00000358779 GPAA1O43292 621 aa20.74■□□□□ 0.91
CDK11A-204ENST00000358779 ATP2B3Q16720 1220 aa20.74■□□□□ 0.91
CDK11A-204ENST00000358779 ORC3Q9UBD5 711 aaPredicted RBP20.74■□□□□ 0.91
CDK11A-204ENST00000358779 MYH3P11055 1940 aa20.74■□□□□ 0.91
CDK11A-204ENST00000358779 STK38Q15208 465 aa20.74■□□□□ 0.91
CDK11A-204ENST00000358779 CCDC94Q9BW85 323 aaPredicted RBP20.74■□□□□ 0.91
CDK11A-204ENST00000358779 CLIC4Q9Y696 253 aa20.74■□□□□ 0.91
CDK11A-204ENST00000358779 WDR19Q8NEZ3 1342 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.73■□□□□ 0.91
CDK11A-204ENST00000358779 A0A1B0GVL5 298 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 ZNF213O14771 459 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 YEATS4O95619 227 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 FBXO18Q8NFZ0 1043 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 KCNG4Q8TDN1 519 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 METTL24Q5JXM2 366 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 BRAPQ7Z569 592 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 RAB11FIP4Q86YS3 637 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 DNAJC10Q8IXB1 793 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 AOPEPQ8N6M6 819 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 ERCC4Q92889 916 aaPredicted RBP20.73■□□□□ 0.91
CDK11A-204ENST00000358779 STRN4Q9NRL3 753 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 POLR3EQ9NVU0 708 aa20.73■□□□□ 0.91
CDK11A-204ENST00000358779 ANKRD36CQ5JPF3 1778 aa20.72■□□□□ 0.91
CDK11A-204ENST00000358779 CPLX1O14810 134 aa20.72■□□□□ 0.91
CDK11A-204ENST00000358779 CTIFO43310 598 aaKnown RBP20.72■□□□□ 0.91
CDK11A-204ENST00000358779 SF3A1Q15459 793 aaKnown RBP20.72■□□□□ 0.91
CDK11A-204ENST00000358779 MYSM1Q5VVJ2 828 aa20.72■□□□□ 0.91
CDK11A-204ENST00000358779 LRRC8AQ8IWT6 810 aa20.72■□□□□ 0.91
CDK11A-204ENST00000358779 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDK11A-204ENST00000358779 MYO5AQ9Y4I1 1855 aaKnown RBP20.72■□□□□ 0.91
CDK11A-204ENST00000358779 POLR3DP05423 398 aaPredicted RBP20.72■□□□□ 0.91
CDK11A-204ENST00000358779 MCAMP43121 646 aa20.72■□□□□ 0.91
CDK11A-204ENST00000358779 NDUFA8P51970 172 aa20.72■□□□□ 0.91
CDK11A-204ENST00000358779 SDF4Q9BRK5 362 aa20.72■□□□□ 0.91
CDK11A-204ENST00000358779 NAT10Q9H0A0 1025 aaKnown RBP20.72■□□□□ 0.91
CDK11A-204ENST00000358779 ATRNO75882 1429 aa20.71■□□□□ 0.91
CDK11A-204ENST00000358779 CDHR2Q9BYE9 1310 aa20.71■□□□□ 0.91
CDK11A-204ENST00000358779 NEMFO60524 1076 aa20.71■□□□□ 0.91
CDK11A-204ENST00000358779 TEX13AQ9BXU3 409 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms