RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 POTEMA6NI47 508 aa8.65□□□□□ -1.02
TNFSF11-202ENST00000358545 CTHP32929 405 aa8.65□□□□□ -1.02
TNFSF11-202ENST00000358545 CCDC93Q567U6 631 aa8.65□□□□□ -1.02
TNFSF11-202ENST00000358545 CST9Q5W186 159 aa8.65□□□□□ -1.02
TNFSF11-202ENST00000358545 CDAN1Q8IWY9 1227 aa8.65□□□□□ -1.02
TNFSF11-202ENST00000358545 PIK3CDO00329 1044 aa8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 CANXP27824 592 aaKnown RBP8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 C1orf141Q5JVX7 400 aa8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 CIAPIN1Q6FI81 312 aa8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 STYK1Q6J9G0 422 aa8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 RGS22Q8NE09 1264 aa8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 COL4A5P29400 1685 aa8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 NPHP1O15259 732 aa8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 SRGNP10124 158 aa8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 FKBP4Q02790 459 aaKnown RBP eCLIP8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 OLFM4Q6UX06 510 aa8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 GPC2Q8N158 579 aa8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 POLKQ9UBT6 870 aa8.64□□□□□ -1.03
TNFSF11-202ENST00000358545 MRC1P22897 1456 aa8.63□□□□□ -1.03
TNFSF11-202ENST00000358545 FZD9O00144 591 aa8.63□□□□□ -1.03
TNFSF11-202ENST00000358545 SKIP12755 728 aa8.63□□□□□ -1.03
TNFSF11-202ENST00000358545 COPS2P61201 443 aa8.63□□□□□ -1.03
TNFSF11-202ENST00000358545 SLC39A6Q13433 755 aa8.63□□□□□ -1.03
TNFSF11-202ENST00000358545 CNBD1Q8NA66 436 aa8.63□□□□□ -1.03
TNFSF11-202ENST00000358545 C7orf43Q8WVR3 580 aa8.63□□□□□ -1.03
TNFSF11-202ENST00000358545 MASTLQ96GX5 879 aa8.63□□□□□ -1.03
TNFSF11-202ENST00000358545 MTMR7Q9Y216 660 aa8.63□□□□□ -1.03
TNFSF11-202ENST00000358545 GJA3Q9Y6H8 435 aa8.63□□□□□ -1.03
TNFSF11-202ENST00000358545 CCNYL3P0C7X3 344 aa8.62□□□□□ -1.03
TNFSF11-202ENST00000358545 IARSP41252 1262 aaKnown RBP8.62□□□□□ -1.03
TNFSF11-202ENST00000358545 ST5P78524 1137 aa8.62□□□□□ -1.03
TNFSF11-202ENST00000358545 ELOAQ14241 798 aaKnown RBP8.62□□□□□ -1.03
TNFSF11-202ENST00000358545 AMOTQ4VCS5 1084 aa8.62□□□□□ -1.03
TNFSF11-202ENST00000358545 SAPCD2Q86UD0 394 aa8.62□□□□□ -1.03
TNFSF11-202ENST00000358545 ARMC2Q8NEN0 867 aa8.62□□□□□ -1.03
TNFSF11-202ENST00000358545 ZIC5Q96T25 663 aa8.62□□□□□ -1.03
TNFSF11-202ENST00000358545 CARD14Q9BXL6 1004 aa8.62□□□□□ -1.03
TNFSF11-202ENST00000358545 EVA1BQ9NVM1 165 aa8.62□□□□□ -1.03
TNFSF11-202ENST00000358545 POLR2AP24928 1970 aaKnown RBP8.62□□□□□ -1.03
TNFSF11-202ENST00000358545 USP17L3A6NCW0 530 aa8.61□□□□□ -1.03
TNFSF11-202ENST00000358545 USP17L4A6NCW7 530 aa8.61□□□□□ -1.03
TNFSF11-202ENST00000358545 CELF2O95319 508 aaKnown RBP8.61□□□□□ -1.03
TNFSF11-202ENST00000358545 EPS15P42566 896 aa8.61□□□□□ -1.03
TNFSF11-202ENST00000358545 TNNT2P45379 298 aaPredicted RBP8.61□□□□□ -1.03
TNFSF11-202ENST00000358545 PTK2Q05397 1052 aa8.61□□□□□ -1.03
TNFSF11-202ENST00000358545 MSS51Q4VC12 460 aa8.61□□□□□ -1.03
TNFSF11-202ENST00000358545 USP17L2Q6R6M4 530 aa8.61□□□□□ -1.03
TNFSF11-202ENST00000358545 USP17L1Q7RTZ2 530 aa8.61□□□□□ -1.03
TNFSF11-202ENST00000358545 GPSM3Q9Y4H4 160 aa8.61□□□□□ -1.03
TNFSF11-202ENST00000358545 A0A087WZG4 1122 aa8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 TLL1O43897 1013 aa8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 SCNN1DP51172 638 aa8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 EIF5P55010 431 aaKnown RBP8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 KCNH2Q12809 1159 aa8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 FAM160A2Q8N612 972 aaPredicted RBP8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 ZNF592Q92610 1267 aa8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 GCC1Q96CN9 775 aa8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 SPSB2Q99619 263 aa8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 NUDT12Q9BQG2 462 aa8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 SLC52A2Q9HAB3 445 aa8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 MKI67P46013 3256 aaKnown RBP8.6□□□□□ -1.03
TNFSF11-202ENST00000358545 USP17L5A8MUK1 530 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 DXOO77932 396 aaKnown RBP8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 EIF6P56537 245 aaKnown RBP8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 HABP4Q5JVS0 413 aaKnown RBP8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 PLEKHM2Q8IWE5 1019 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 SYNE4Q8N205 404 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 NBPF15Q8N660 670 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 FAM174AQ8TBP5 190 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 JDP2Q8WYK2 163 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 GPKOWQ92917 476 aaPredicted RBP eCLIP8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 SETDB2Q96T68 719 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 ZNF408Q9H9D4 720 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 PRDM9Q9NQV7 894 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 CEP126Q9P2H0 1117 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 IVNS1ABPQ9Y6Y0 642 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 SNED1Q8TER0 1413 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 NPR1P16066 1061 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 PTPN5P54829 565 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 MCCD1P59942 119 aaPredicted RBP8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 SLFNL1Q499Z3 407 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 USP50Q70EL3 339 aaPredicted RBP8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 RTKN2Q8IZC4 609 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 DEPDC4Q8N2C3 294 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 HHIPL1Q96JK4 782 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 GLIS2Q9BZE0 524 aaPredicted RBP8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 LGR6Q9HBX8 967 aa8.59□□□□□ -1.03
TNFSF11-202ENST00000358545 SIPA1L3O60292 1781 aaPredicted RBP8.58□□□□□ -1.04
TNFSF11-202ENST00000358545 CUL9Q8IWT3 2517 aa8.58□□□□□ -1.04
TNFSF11-202ENST00000358545 MMP16P51512 607 aa8.58□□□□□ -1.04
TNFSF11-202ENST00000358545 NOGQ13253 232 aa8.58□□□□□ -1.04
TNFSF11-202ENST00000358545 ZMIZ1Q9ULJ6 1067 aa8.58□□□□□ -1.04
TNFSF11-202ENST00000358545 NOVA2Q9UNW9 492 aaKnown RBP8.58□□□□□ -1.04
TNFSF11-202ENST00000358545 PCDHB9Q9Y5E1 797 aa8.58□□□□□ -1.04
TNFSF11-202ENST00000358545 CEP290O15078 2479 aa8.58□□□□□ -1.04
TNFSF11-202ENST00000358545 TRIOBPQ9H2D6 2365 aa8.57□□□□□ -1.04
TNFSF11-202ENST00000358545 TMEM164Q5U3C3 297 aa8.57□□□□□ -1.04
TNFSF11-202ENST00000358545 B4GALNT3Q6L9W6 998 aa8.57□□□□□ -1.04
TNFSF11-202ENST00000358545 MTRQ99707 1265 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms