RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 BICDL1Q6ZP65 573 aa18.87■□□□□ 0.61
PTPN5-201ENST00000358540 SYAP1Q96A49 352 aaPredicted RBP18.87■□□□□ 0.61
PTPN5-201ENST00000358540 MPHOSPH8Q99549 860 aa18.87■□□□□ 0.61
PTPN5-201ENST00000358540 UBE2HP62256 183 aa18.86■□□□□ 0.61
PTPN5-201ENST00000358540 WNK3Q9BYP7 1800 aa18.86■□□□□ 0.61
PTPN5-201ENST00000358540 PDCP20941 246 aa18.86■□□□□ 0.61
PTPN5-201ENST00000358540 NGLY1Q96IV0 654 aa18.86■□□□□ 0.61
PTPN5-201ENST00000358540 WWC3Q9ULE0 1092 aa18.86■□□□□ 0.61
PTPN5-201ENST00000358540 EXOSC10Q01780 885 aaKnown RBP18.85■□□□□ 0.61
PTPN5-201ENST00000358540 TTC6Q86TZ1 520 aa18.85■□□□□ 0.61
PTPN5-201ENST00000358540 MPNDQ8N594 471 aa18.85■□□□□ 0.61
PTPN5-201ENST00000358540 DENND2AQ9ULE3 1009 aa18.85■□□□□ 0.61
PTPN5-201ENST00000358540 MCM5P33992 734 aa18.85■□□□□ 0.61
PTPN5-201ENST00000358540 LRRFIP1Q32MZ4 808 aaKnown RBP18.85■□□□□ 0.61
PTPN5-201ENST00000358540 APPP05067 770 aa18.85■□□□□ 0.61
PTPN5-201ENST00000358540 ZFYP08048 801 aaPredicted RBP18.85■□□□□ 0.61
PTPN5-201ENST00000358540 HMGB1P09429 215 aaKnown RBP18.85■□□□□ 0.61
PTPN5-201ENST00000358540 FAM184AQ8NB25 1140 aa18.85■□□□□ 0.61
PTPN5-201ENST00000358540 TSPY26PQ9H489 355 aa18.85■□□□□ 0.61
PTPN5-201ENST00000358540 NRAPQ86VF7 1730 aa18.84■□□□□ 0.61
PTPN5-201ENST00000358540 ANKRD36CQ5JPF3 1778 aa18.84■□□□□ 0.61
PTPN5-201ENST00000358540 DMTNQ08495 405 aa18.84■□□□□ 0.61
PTPN5-201ENST00000358540 PUM3Q15397 648 aaKnown RBP18.84■□□□□ 0.61
PTPN5-201ENST00000358540 H3BQV1 296 aa18.84■□□□□ 0.61
PTPN5-201ENST00000358540 CBX1P83916 185 aa18.84■□□□□ 0.61
PTPN5-201ENST00000358540 IMMTQ16891 758 aaKnown RBP18.84■□□□□ 0.61
PTPN5-201ENST00000358540 IFFO2Q5TF58 517 aa18.84■□□□□ 0.61
PTPN5-201ENST00000358540 TAOK2Q9UL54 1235 aa18.84■□□□□ 0.61
PTPN5-201ENST00000358540 IQSEC3Q9UPP2 1182 aaPredicted RBP18.84■□□□□ 0.61
PTPN5-201ENST00000358540 MYH14Q7Z406 1995 aaKnown RBP18.84■□□□□ 0.61
PTPN5-201ENST00000358540 CTDNEP1O95476 244 aa18.83■□□□□ 0.61
PTPN5-201ENST00000358540 ADD2P35612 726 aa18.83■□□□□ 0.61
PTPN5-201ENST00000358540 KRT85P78386 507 aa18.83■□□□□ 0.61
PTPN5-201ENST00000358540 GUCY1B3Q02153 619 aa18.83■□□□□ 0.61
PTPN5-201ENST00000358540 LINC00116Q8NCU8 138 aa18.83■□□□□ 0.61
PTPN5-201ENST00000358540 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.83■□□□□ 0.61
PTPN5-201ENST00000358540 ZNF532Q9HCE3 1301 aa18.83■□□□□ 0.61
PTPN5-201ENST00000358540 PTPDC1A2A3K4 754 aa18.83■□□□□ 0.6
PTPN5-201ENST00000358540 TOM1O60784 492 aa18.83■□□□□ 0.6
PTPN5-201ENST00000358540 ZSCAN20P17040 1043 aaPredicted RBP18.83■□□□□ 0.6
PTPN5-201ENST00000358540 PFKFB2O60825 505 aa18.83■□□□□ 0.6
PTPN5-201ENST00000358540 NTSR2O95665 410 aa18.83■□□□□ 0.6
PTPN5-201ENST00000358540 CEBPZQ03701 1054 aaKnown RBP18.83■□□□□ 0.6
PTPN5-201ENST00000358540 CCDC183Q5T5S1 534 aa18.83■□□□□ 0.6
PTPN5-201ENST00000358540 GIMAP6Q6P9H5 292 aa18.83■□□□□ 0.6
PTPN5-201ENST00000358540 NSUN7Q8NE18 718 aaKnown RBP18.83■□□□□ 0.6
PTPN5-201ENST00000358540 NKX2-3Q8TAU0 364 aa18.83■□□□□ 0.6
PTPN5-201ENST00000358540 LPIN2Q92539 896 aa18.83■□□□□ 0.6
PTPN5-201ENST00000358540 WTIPA6NIX2 430 aaPredicted RBP18.82■□□□□ 0.6
PTPN5-201ENST00000358540 BARGINQ6ZT62 677 aa18.82■□□□□ 0.6
PTPN5-201ENST00000358540 UBAP1LF5GYI3 381 aa18.82■□□□□ 0.6
PTPN5-201ENST00000358540 RASGRF1Q13972 1273 aa18.82■□□□□ 0.6
PTPN5-201ENST00000358540 C3orf67Q6ZVT6 689 aa18.82■□□□□ 0.6
PTPN5-201ENST00000358540 MYH3P11055 1940 aa18.82■□□□□ 0.6
PTPN5-201ENST00000358540 PDE6AP16499 860 aa18.81■□□□□ 0.6
PTPN5-201ENST00000358540 FGFR2P21802 821 aa18.81■□□□□ 0.6
PTPN5-201ENST00000358540 BCAMP50895 628 aa18.81■□□□□ 0.6
PTPN5-201ENST00000358540 CTNNA3Q9UI47 895 aa18.81■□□□□ 0.6
PTPN5-201ENST00000358540 LAMA4Q16363 1823 aa18.81■□□□□ 0.6
PTPN5-201ENST00000358540 MROH5Q6ZUA9 1318 aa18.81■□□□□ 0.6
PTPN5-201ENST00000358540 PDIA3P30101 505 aaKnown RBP18.81■□□□□ 0.6
PTPN5-201ENST00000358540 CCDC24Q8N4L8 307 aa18.81■□□□□ 0.6
PTPN5-201ENST00000358540 SLC5A1P13866 664 aa18.8■□□□□ 0.6
PTPN5-201ENST00000358540 CCDC152Q4G0S7 254 aa18.8■□□□□ 0.6
PTPN5-201ENST00000358540 ZNF213O14771 459 aa18.8■□□□□ 0.6
PTPN5-201ENST00000358540 PRC1O43663 620 aa18.8■□□□□ 0.6
PTPN5-201ENST00000358540 IGHMBP2P38935 993 aaKnown RBP18.8■□□□□ 0.6
PTPN5-201ENST00000358540 KIAA2012Q0VF49 1180 aa18.8■□□□□ 0.6
PTPN5-201ENST00000358540 PARP10Q53GL7 1025 aa18.8■□□□□ 0.6
PTPN5-201ENST00000358540 UTP14CQ5TAP6 766 aaKnown RBP18.8■□□□□ 0.6
PTPN5-201ENST00000358540 SPATA5Q8NB90 893 aa18.8■□□□□ 0.6
PTPN5-201ENST00000358540 INCENPQ9NQS7 918 aa18.8■□□□□ 0.6
PTPN5-201ENST00000358540 SPEF2Q9C093 1822 aa18.8■□□□□ 0.6
PTPN5-201ENST00000358540 PHF14O94880 888 aa18.79■□□□□ 0.6
PTPN5-201ENST00000358540 ARID4AP29374 1257 aaPredicted RBP18.79■□□□□ 0.6
PTPN5-201ENST00000358540 ERFEQ4G0M1 354 aa18.79■□□□□ 0.6
PTPN5-201ENST00000358540 MAGEB6Q8N7X4 407 aa18.79■□□□□ 0.6
PTPN5-201ENST00000358540 SPATA32Q96LK8 384 aa18.79■□□□□ 0.6
PTPN5-201ENST00000358540 FTOQ9C0B1 505 aaKnown RBP eCLIP18.79■□□□□ 0.6
PTPN5-201ENST00000358540 LIG1P18858 919 aa18.79■□□□□ 0.6
PTPN5-201ENST00000358540 RALYLQ86SE5 291 aaKnown RBP18.79■□□□□ 0.6
PTPN5-201ENST00000358540 STK11IPQ8N1F8 1099 aa18.79■□□□□ 0.6
PTPN5-201ENST00000358540 AKAP11Q9UKA4 1901 aa18.79■□□□□ 0.6
PTPN5-201ENST00000358540 ANTXR2P58335 489 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 RESTQ13127 1097 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 TTF1Q15361 905 aaPredicted RBP18.78■□□□□ 0.6
PTPN5-201ENST00000358540 CAMK4Q16566 473 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 TBC1D10CQ8IV04 446 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 SMARCC2Q8TAQ2 1214 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 SMARCC1Q92922 1105 aaPredicted RBP18.78■□□□□ 0.6
PTPN5-201ENST00000358540 AGXT2Q9BYV1 514 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 NBPF3Q9H094 633 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 UQCRFS1P1P0C7P4 283 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.78■□□□□ 0.6
PTPN5-201ENST00000358540 ABCC12Q96J65 1359 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 MYO5AQ9Y4I1 1855 aaKnown RBP18.78■□□□□ 0.6
PTPN5-201ENST00000358540 KLF18A0A0U1RQI7 1052 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 CHRNDQ07001 517 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 OTUD7BQ6GQQ9 843 aa18.78■□□□□ 0.6
PTPN5-201ENST00000358540 ZSCAN25Q6NSZ9 544 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms