RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 ATF5Q9Y2D1 282 aaPredicted RBP10.9□□□□□ -0.66
SMARCAL1-202ENST00000358207 CLSTN1O94985 981 aa10.9□□□□□ -0.67
SMARCAL1-202ENST00000358207 SLU7O95391 586 aaKnown RBP10.9□□□□□ -0.67
SMARCAL1-202ENST00000358207 TPRNQ4KMQ1 711 aa10.9□□□□□ -0.67
SMARCAL1-202ENST00000358207 PHAXQ9H814 394 aaKnown RBP10.9□□□□□ -0.67
SMARCAL1-202ENST00000358207 SASH3O75995 380 aa10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 GPS2Q13227 327 aa10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 TAF7Q15545 349 aaPredicted RBP10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 CCDC183Q5T5S1 534 aa10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 TTC19Q6DKK2 380 aaPredicted RBP10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 CWC27Q6UX04 472 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 TFCP2L1Q9NZI6 479 aa10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 CEMIPQ8WUJ3 1361 aa10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 ACTN2P35609 894 aa10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 AIMP1Q12904 312 aaKnown RBP10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 TMOD3Q9NYL9 352 aa10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 LAMB2P55268 1798 aa10.89□□□□□ -0.67
SMARCAL1-202ENST00000358207 CCDC196A0A1B0GTZ2 297 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 RPS6KA4O75676 772 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 SEC31AO94979 1220 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 LMAN1P49257 510 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 ZC3H12AQ5D1E8 599 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 NYAP1Q6ZVC0 841 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 CACTINQ8WUQ7 758 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 PPM1EQ8WY54 764 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 FAXDC2Q96IV6 333 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 ZNF330Q9Y3S2 320 aaPredicted RBP10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 TCHHQ07283 1943 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 CORO7P57737 925 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 ITPK1Q13572 414 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 AKAP4Q5JQC9 854 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 GIMAP6Q6P9H5 292 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 CHD1LQ86WJ1 897 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 SYTL4Q96C24 671 aaPredicted RBP10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 RBM28Q9NW13 759 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 ADAMTSL1Q8N6G6 1762 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 TTC36A6NLP5 189 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 HTATSF1O43719 755 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 PTCD1O75127 700 aaKnown RBP10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 MX1P20591 662 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 HDGFL1Q5TGJ6 251 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 ADAM21Q9UKJ8 722 aa10.88□□□□□ -0.67
SMARCAL1-202ENST00000358207 THSD7BQ9C0I4 1608 aa10.87□□□□□ -0.67
SMARCAL1-202ENST00000358207 IPO8O15397 1037 aaKnown RBP10.87□□□□□ -0.67
SMARCAL1-202ENST00000358207 CPP00450 1065 aa10.87□□□□□ -0.67
SMARCAL1-202ENST00000358207 TTLL5Q6EMB2 1281 aa10.87□□□□□ -0.67
SMARCAL1-202ENST00000358207 PDRG1Q9NUG6 133 aa10.87□□□□□ -0.67
SMARCAL1-202ENST00000358207 MYL6BP14649 208 aa10.87□□□□□ -0.67
SMARCAL1-202ENST00000358207 ZKSCAN8Q15776 578 aaPredicted RBP10.87□□□□□ -0.67
SMARCAL1-202ENST00000358207 NAIF1Q69YI7 327 aaPredicted RBP10.87□□□□□ -0.67
SMARCAL1-202ENST00000358207 RNMTO43148 476 aaKnown RBP10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 TRDNQ13061 729 aa10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 AK7Q96M32 723 aa10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 SRRTQ9BXP5 876 aaKnown RBP10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 CHPF2Q9P2E5 772 aa10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 PROSER3Q2NL68 480 aa10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 SLC4A9Q96Q91 983 aa10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 STK31Q9BXU1 1019 aa10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 PSD3Q9NYI0 1048 aa10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 RBM5P52756 815 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 ARHGAP29Q52LW3 1261 aa10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 RNF20Q5VTR2 975 aa10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 NBPF5PQ86XG9 351 aaPredicted RBP10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 EXOC4Q96A65 974 aa10.86□□□□□ -0.67
SMARCAL1-202ENST00000358207 LRRC37AA6NMS7 1700 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 TBC1D8O95759 1140 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 YBX3P16989 372 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 SMC1AQ14683 1233 aaKnown RBP10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 CCDC144BQ3MJ40 725 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 CCDC144CPQ8IYA2 1237 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 NLGN1Q8N2Q7 840 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 TBC1D22AQ8WUA7 517 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 KAT2BQ92831 832 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 ITFG2Q969R8 447 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 MEIS3Q99687 375 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 SOS1Q07889 1333 aaPredicted RBP10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 SCN4AP35499 1836 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 MPHOSPH10O00566 681 aaKnown RBP10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 KIF3CO14782 793 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 PTPN14Q15678 1187 aa10.85□□□□□ -0.67
SMARCAL1-202ENST00000358207 USP42Q9H9J4 1324 aaKnown RBP10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 ARID5BQ14865 1188 aa10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 TMCO3Q6UWJ1 677 aa10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 OTUD6BQ8N6M0 293 aa10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 NLGN2Q8NFZ4 835 aa10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 SLC24A3Q9HC58 644 aa10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 BSDC1Q9NW68 430 aaPredicted RBP10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 SSR1P43307 286 aaKnown RBP10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 ALDH1L2Q3SY69 923 aa10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 ZNF513Q8N8E2 541 aaPredicted RBP10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 CCDC34Q96HJ3 373 aa10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 DDX19BQ9UMR2 479 aa10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 CCDC88AQ3V6T2 1871 aa10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 UTRNP46939 3433 aa10.84□□□□□ -0.67
SMARCAL1-202ENST00000358207 C1QTNF8P60827 252 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 AMIGO3Q86WK7 504 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 PRPF38AQ8NAV1 312 aaKnown RBP10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 MIEF2Q96C03 454 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 RPS6KL1Q9Y6S9 549 aa10.83□□□□□ -0.68
SMARCAL1-202ENST00000358207 H0YHG0 523 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms