RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 STAP2Q9UGK3 403 aa18.17■□□□□ 0.5
CCNE1-202ENST00000357943 NDUFB9Q9Y6M9 179 aa18.17■□□□□ 0.5
CCNE1-202ENST00000357943 TTC41PQ6P2S7 1318 aa18.17■□□□□ 0.5
CCNE1-202ENST00000357943 RAD17O75943 681 aa18.16■□□□□ 0.5
CCNE1-202ENST00000357943 CHAF1AQ13111 956 aaPredicted RBP18.16■□□□□ 0.5
CCNE1-202ENST00000357943 FBXW7Q969H0 707 aa18.16■□□□□ 0.5
CCNE1-202ENST00000357943 BOLA2Q9H3K6 86 aa18.16■□□□□ 0.5
CCNE1-202ENST00000357943 SNRKQ9NRH2 765 aa18.16■□□□□ 0.5
CCNE1-202ENST00000357943 CHD4Q14839 1912 aa18.16■□□□□ 0.5
CCNE1-202ENST00000357943 SEMA3EO15041 775 aa18.16■□□□□ 0.5
CCNE1-202ENST00000357943 CXCL9Q07325 125 aa18.16■□□□□ 0.5
CCNE1-202ENST00000357943 TTLL5Q6EMB2 1281 aa18.16■□□□□ 0.5
CCNE1-202ENST00000357943 SPATA5Q8NB90 893 aa18.16■□□□□ 0.5
CCNE1-202ENST00000357943 DENND2AQ9ULE3 1009 aa18.16■□□□□ 0.5
CCNE1-202ENST00000357943 SCN9AQ15858 1988 aa18.15■□□□□ 0.5
CCNE1-202ENST00000357943 ZNF541Q9H0D2 1346 aa18.15■□□□□ 0.5
CCNE1-202ENST00000357943 ZBTB22O15209 634 aa18.15■□□□□ 0.5
CCNE1-202ENST00000357943 ZAP70P43403 619 aa18.15■□□□□ 0.5
CCNE1-202ENST00000357943 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.15■□□□□ 0.5
CCNE1-202ENST00000357943 OSBPL3Q9H4L5 887 aa18.15■□□□□ 0.5
CCNE1-202ENST00000357943 USP17L3A6NCW0 530 aa18.14■□□□□ 0.49
CCNE1-202ENST00000357943 USP17L4A6NCW7 530 aa18.14■□□□□ 0.49
CCNE1-202ENST00000357943 PSMD14O00487 310 aa18.14■□□□□ 0.49
CCNE1-202ENST00000357943 EIF6P56537 245 aaKnown RBP18.14■□□□□ 0.49
CCNE1-202ENST00000357943 STRIP1Q5VSL9 837 aa18.14■□□□□ 0.49
CCNE1-202ENST00000357943 USP17L1Q7RTZ2 530 aa18.14■□□□□ 0.49
CCNE1-202ENST00000357943 DNAJC2Q99543 621 aaKnown RBP18.14■□□□□ 0.49
CCNE1-202ENST00000357943 MXD3Q9BW11 206 aa18.14■□□□□ 0.49
CCNE1-202ENST00000357943 DICER1Q9UPY3 1922 aaKnown RBP18.14■□□□□ 0.49
CCNE1-202ENST00000357943 FAM205AQ6ZU69 1335 aa18.14■□□□□ 0.49
CCNE1-202ENST00000357943 ERC2O15083 957 aa18.13■□□□□ 0.49
CCNE1-202ENST00000357943 GLRX3O76003 335 aaKnown RBP18.13■□□□□ 0.49
CCNE1-202ENST00000357943 RGS3P49796 1198 aa18.13■□□□□ 0.49
CCNE1-202ENST00000357943 DACT2Q5SW24 774 aa18.13■□□□□ 0.49
CCNE1-202ENST00000357943 CIAPIN1Q6FI81 312 aa18.13■□□□□ 0.49
CCNE1-202ENST00000357943 CYP2E1P05181 493 aaPredicted RBP18.12■□□□□ 0.49
CCNE1-202ENST00000357943 EDC3Q96F86 508 aaKnown RBP18.12■□□□□ 0.49
CCNE1-202ENST00000357943 HAUS7Q99871 368 aa18.12■□□□□ 0.49
CCNE1-202ENST00000357943 ANTXR1Q9H6X2 564 aa18.12■□□□□ 0.49
CCNE1-202ENST00000357943 ZBTB12Q9Y330 459 aaPredicted RBP18.12■□□□□ 0.49
CCNE1-202ENST00000357943 PDS5AQ29RF7 1337 aaKnown RBP18.12■□□□□ 0.49
CCNE1-202ENST00000357943 TIAM2Q8IVF5 1701 aa18.12■□□□□ 0.49
CCNE1-202ENST00000357943 MAP4K4O95819 1239 aaPredicted RBP18.12■□□□□ 0.49
CCNE1-202ENST00000357943 VIL1P09327 827 aaKnown RBP18.12■□□□□ 0.49
CCNE1-202ENST00000357943 MFSD14BQ5SR56 506 aa18.12■□□□□ 0.49
CCNE1-202ENST00000357943 TBC1D9Q6ZT07 1266 aa18.12■□□□□ 0.49
CCNE1-202ENST00000357943 CERS5Q8N5B7 392 aa18.12■□□□□ 0.49
CCNE1-202ENST00000357943 AOX1Q06278 1338 aa18.11■□□□□ 0.49
CCNE1-202ENST00000357943 AKAP11Q9UKA4 1901 aa18.11■□□□□ 0.49
CCNE1-202ENST00000357943 WDR66Q8TBY9 1149 aa18.11■□□□□ 0.49
CCNE1-202ENST00000357943 GJA3Q9Y6H8 435 aa18.11■□□□□ 0.49
CCNE1-202ENST00000357943 ZC3H4Q9UPT8 1303 aaKnown RBP18.11■□□□□ 0.49
CCNE1-202ENST00000357943 GOLIM4O00461 696 aa18.1■□□□□ 0.49
CCNE1-202ENST00000357943 TNIP1Q15025 636 aa18.1■□□□□ 0.49
CCNE1-202ENST00000357943 GRIK5Q16478 980 aa18.1■□□□□ 0.49
CCNE1-202ENST00000357943 RSBN1LQ6PCB5 846 aaPredicted RBP18.1■□□□□ 0.49
CCNE1-202ENST00000357943 PAG1Q9NWQ8 432 aa18.1■□□□□ 0.49
CCNE1-202ENST00000357943 ABCF2Q9UG63 623 aa18.1■□□□□ 0.49
CCNE1-202ENST00000357943 SALL1Q9NSC2 1324 aa18.1■□□□□ 0.49
CCNE1-202ENST00000357943 DDNO94850 711 aaPredicted RBP18.09■□□□□ 0.49
CCNE1-202ENST00000357943 PRDX5P30044 214 aa18.09■□□□□ 0.49
CCNE1-202ENST00000357943 TBC1D22AQ8WUA7 517 aa18.09■□□□□ 0.49
CCNE1-202ENST00000357943 PIH1D3Q9NQM4 214 aaKnown RBP18.09■□□□□ 0.49
CCNE1-202ENST00000357943 GSPT1P15170 499 aaKnown RBP18.09■□□□□ 0.49
CCNE1-202ENST00000357943 GPC2Q8N158 579 aa18.09■□□□□ 0.49
CCNE1-202ENST00000357943 ZNF646O15015 1829 aaPredicted RBP18.08■□□□□ 0.49
CCNE1-202ENST00000357943 MYH13Q9UKX3 1938 aa18.08■□□□□ 0.48
CCNE1-202ENST00000357943 FKBP1AP62942 108 aaKnown RBP18.08■□□□□ 0.48
CCNE1-202ENST00000357943 TTC22Q5TAA0 569 aa18.08■□□□□ 0.48
CCNE1-202ENST00000357943 GMLQ99445 158 aa18.08■□□□□ 0.48
CCNE1-202ENST00000357943 F8W031 263 aaPredicted RBP18.07■□□□□ 0.48
CCNE1-202ENST00000357943 DPY19L2Q6NUT2 758 aa18.07■□□□□ 0.48
CCNE1-202ENST00000357943 KIAA0825Q8IV33 1275 aa18.07■□□□□ 0.48
CCNE1-202ENST00000357943 ZGPATQ8N5A5 531 aaKnown RBP18.07■□□□□ 0.48
CCNE1-202ENST00000357943 PSME4Q14997 1843 aa18.07■□□□□ 0.48
CCNE1-202ENST00000357943 GLTPD2A6NH11 291 aa18.06■□□□□ 0.48
CCNE1-202ENST00000357943 GMPSP49915 693 aaPredicted RBP18.06■□□□□ 0.48
CCNE1-202ENST00000357943 TTF1Q15361 905 aaPredicted RBP18.06■□□□□ 0.48
CCNE1-202ENST00000357943 AGBL3Q8NEM8 1001 aa18.06■□□□□ 0.48
CCNE1-202ENST00000357943 LRP2BPQ9P2M1 347 aa18.06■□□□□ 0.48
CCNE1-202ENST00000357943 MYO3BQ8WXR4 1341 aa18.06■□□□□ 0.48
CCNE1-202ENST00000357943 TRIM6-TRIM34B2RNG4 842 aa18.05■□□□□ 0.48
CCNE1-202ENST00000357943 IDH1O75874 414 aaKnown RBP18.05■□□□□ 0.48
CCNE1-202ENST00000357943 LDHBP07195 334 aaKnown RBP18.05■□□□□ 0.48
CCNE1-202ENST00000357943 ERICH6Q7L0X2 663 aa18.05■□□□□ 0.48
CCNE1-202ENST00000357943 RPS12P25398 132 aaKnown RBP18.05■□□□□ 0.48
CCNE1-202ENST00000357943 SCNN1DP51172 638 aa18.05■□□□□ 0.48
CCNE1-202ENST00000357943 ZNF384Q8TF68 577 aa18.05■□□□□ 0.48
CCNE1-202ENST00000357943 RILPL2Q969X0 211 aa18.05■□□□□ 0.48
CCNE1-202ENST00000357943 RAI14Q9P0K7 980 aa18.05■□□□□ 0.48
CCNE1-202ENST00000357943 TTF2Q9UNY4 1162 aaKnown RBP18.05■□□□□ 0.48
CCNE1-202ENST00000357943 SUGT1Q9Y2Z0 365 aa18.05■□□□□ 0.48
CCNE1-202ENST00000357943 SHTN1A0MZ66 631 aa18.04■□□□□ 0.48
CCNE1-202ENST00000357943 CHGBP05060 677 aa18.04■□□□□ 0.48
CCNE1-202ENST00000357943 SPTY2D1Q68D10 685 aaPredicted RBP18.04■□□□□ 0.48
CCNE1-202ENST00000357943 KBTBD3Q8NAB2 608 aa18.04■□□□□ 0.48
CCNE1-202ENST00000357943 DPF2Q92785 391 aa18.04■□□□□ 0.48
CCNE1-202ENST00000357943 EVI5LQ96CN4 794 aa18.04■□□□□ 0.48
CCNE1-202ENST00000357943 MECOMQ03112 1051 aa18.03■□□□□ 0.48
CCNE1-202ENST00000357943 CNTROBQ8N137 903 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms