RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 KIF3AQ9Y496 699 aa18.63■□□□□ 0.57
PHTF1-201ENST00000357783 PRC1O43663 620 aa18.62■□□□□ 0.57
PHTF1-201ENST00000357783 ADD2P35612 726 aa18.62■□□□□ 0.57
PHTF1-201ENST00000357783 PLCB2Q00722 1185 aa18.62■□□□□ 0.57
PHTF1-201ENST00000357783 CCDC102BQ68D86 513 aa18.62■□□□□ 0.57
PHTF1-201ENST00000357783 CKAP2LQ8IYA6 745 aa18.62■□□□□ 0.57
PHTF1-201ENST00000357783 TNMDQ9H2S6 317 aa18.62■□□□□ 0.57
PHTF1-201ENST00000357783 SALL1Q9NSC2 1324 aa18.62■□□□□ 0.57
PHTF1-201ENST00000357783 DDB1Q16531 1140 aa18.62■□□□□ 0.57
PHTF1-201ENST00000357783 SUSD4Q5VX71 490 aa18.62■□□□□ 0.57
PHTF1-201ENST00000357783 ZNF213O14771 459 aa18.61■□□□□ 0.57
PHTF1-201ENST00000357783 EIF5P55010 431 aaKnown RBP18.61■□□□□ 0.57
PHTF1-201ENST00000357783 ZSCAN25Q6NSZ9 544 aa18.61■□□□□ 0.57
PHTF1-201ENST00000357783 INTS5Q6P9B9 1019 aaKnown RBP18.61■□□□□ 0.57
PHTF1-201ENST00000357783 MB21D2Q8IYB1 491 aaPredicted RBP18.61■□□□□ 0.57
PHTF1-201ENST00000357783 FTOQ9C0B1 505 aaKnown RBP eCLIP18.61■□□□□ 0.57
PHTF1-201ENST00000357783 CFAP45Q9UL16 551 aa18.61■□□□□ 0.57
PHTF1-201ENST00000357783 KDM4AO75164 1064 aa18.61■□□□□ 0.57
PHTF1-201ENST00000357783 MCM5P33992 734 aa18.61■□□□□ 0.57
PHTF1-201ENST00000357783 ATP6V1AP38606 617 aa18.61■□□□□ 0.57
PHTF1-201ENST00000357783 TTF1Q15361 905 aaPredicted RBP18.61■□□□□ 0.57
PHTF1-201ENST00000357783 RALYLQ86SE5 291 aaKnown RBP18.61■□□□□ 0.57
PHTF1-201ENST00000357783 RAB11FIP4Q86YS3 637 aa18.61■□□□□ 0.57
PHTF1-201ENST00000357783 ZNF512BQ96KM6 892 aaPredicted RBP18.61■□□□□ 0.57
PHTF1-201ENST00000357783 CCDC87Q9NVE4 849 aa18.61■□□□□ 0.57
PHTF1-201ENST00000357783 CARMIL3Q8ND23 1372 aa18.6■□□□□ 0.57
PHTF1-201ENST00000357783 NR1I2O75469 434 aa18.6■□□□□ 0.57
PHTF1-201ENST00000357783 CRKLP46109 303 aaKnown RBP18.6■□□□□ 0.57
PHTF1-201ENST00000357783 PUM3Q15397 648 aaKnown RBP18.6■□□□□ 0.57
PHTF1-201ENST00000357783 KLHL34Q8N239 644 aa18.6■□□□□ 0.57
PHTF1-201ENST00000357783 DDX19AQ9NUU7 478 aaKnown RBP18.6■□□□□ 0.57
PHTF1-201ENST00000357783 SPATA31A1Q5TZJ5 1347 aa18.6■□□□□ 0.57
PHTF1-201ENST00000357783 ZNF500O60304 480 aaPredicted RBP18.6■□□□□ 0.57
PHTF1-201ENST00000357783 NCOA7Q8NI08 942 aa18.6■□□□□ 0.57
PHTF1-201ENST00000357783 ZNF532Q9HCE3 1301 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 KLF18A0A0U1RQI7 1052 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 GOLGA8BA8MQT2 603 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 ADD1P35611 737 aaKnown RBP18.59■□□□□ 0.57
PHTF1-201ENST00000357783 ANTXR2P58335 489 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 TYRO3Q06418 890 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 FBXL16Q8N461 479 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 WWC3Q9ULE0 1092 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 LRP5O75197 1615 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 MROH5Q6ZUA9 1318 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 SNAP23O00161 211 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 APPP05067 770 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 ARID4AP29374 1257 aaPredicted RBP18.59■□□□□ 0.57
PHTF1-201ENST00000357783 EVCP57679 992 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 LPIN2Q92539 896 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 CLSTN2Q9H4D0 955 aa18.59■□□□□ 0.57
PHTF1-201ENST00000357783 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.59■□□□□ 0.57
PHTF1-201ENST00000357783 OFD1O75665 1012 aa18.58■□□□□ 0.57
PHTF1-201ENST00000357783 PDE6AP16499 860 aa18.58■□□□□ 0.57
PHTF1-201ENST00000357783 SEC31BQ9NQW1 1179 aa18.58■□□□□ 0.57
PHTF1-201ENST00000357783 MRVI1Q9Y6F6 885 aa18.58■□□□□ 0.57
PHTF1-201ENST00000357783 UQCRFS1P1P0C7P4 283 aa18.58■□□□□ 0.56
PHTF1-201ENST00000357783 FDPSP14324 419 aaKnown RBP18.58■□□□□ 0.56
PHTF1-201ENST00000357783 CDCA7Q9BWT1 371 aaPredicted RBP18.58■□□□□ 0.56
PHTF1-201ENST00000357783 NBPF3Q9H094 633 aa18.58■□□□□ 0.56
PHTF1-201ENST00000357783 ATRNO75882 1429 aa18.58■□□□□ 0.56
PHTF1-201ENST00000357783 LOC102724428A0A0B4J2F2 783 aa18.58■□□□□ 0.56
PHTF1-201ENST00000357783 FGFR2P21802 821 aa18.58■□□□□ 0.56
PHTF1-201ENST00000357783 SIK1P57059 783 aa18.58■□□□□ 0.56
PHTF1-201ENST00000357783 MARCH10Q8NA82 808 aaPredicted RBP18.58■□□□□ 0.56
PHTF1-201ENST00000357783 UTP14AQ9BVJ6 771 aaKnown RBP18.58■□□□□ 0.56
PHTF1-201ENST00000357783 DENND2AQ9ULE3 1009 aa18.58■□□□□ 0.56
PHTF1-201ENST00000357783 AP5Z1O43299 807 aa18.57■□□□□ 0.56
PHTF1-201ENST00000357783 ITPK1Q13572 414 aa18.57■□□□□ 0.56
PHTF1-201ENST00000357783 UBE3CQ15386 1083 aa18.57■□□□□ 0.56
PHTF1-201ENST00000357783 CHMP4CQ96CF2 233 aa18.57■□□□□ 0.56
PHTF1-201ENST00000357783 USP28Q96RU2 1077 aa18.57■□□□□ 0.56
PHTF1-201ENST00000357783 MPHOSPH8Q99549 860 aa18.57■□□□□ 0.56
PHTF1-201ENST00000357783 DDX60Q8IY21 1712 aaKnown RBP18.57■□□□□ 0.56
PHTF1-201ENST00000357783 MYH14Q7Z406 1995 aaKnown RBP18.57■□□□□ 0.56
PHTF1-201ENST00000357783 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.57■□□□□ 0.56
PHTF1-201ENST00000357783 TBC1D10CQ8IV04 446 aa18.57■□□□□ 0.56
PHTF1-201ENST00000357783 ZNF830Q96NB3 372 aaPredicted RBP18.57■□□□□ 0.56
PHTF1-201ENST00000357783 HPS5Q9UPZ3 1129 aa18.57■□□□□ 0.56
PHTF1-201ENST00000357783 NRAPQ86VF7 1730 aa18.56■□□□□ 0.56
PHTF1-201ENST00000357783 ARAP2Q8WZ64 1704 aa18.56■□□□□ 0.56
PHTF1-201ENST00000357783 SLC5A1P13866 664 aa18.56■□□□□ 0.56
PHTF1-201ENST00000357783 OTUD7BQ6GQQ9 843 aa18.56■□□□□ 0.56
PHTF1-201ENST00000357783 ILDR1Q86SU0 546 aaPredicted RBP18.56■□□□□ 0.56
PHTF1-201ENST00000357783 FAM200AQ8TCP9 573 aa18.56■□□□□ 0.56
PHTF1-201ENST00000357783 AK7Q96M32 723 aa18.56■□□□□ 0.56
PHTF1-201ENST00000357783 NUTM2BA6NNL0 878 aaPredicted RBP18.56■□□□□ 0.56
PHTF1-201ENST00000357783 NUTM2EB1AL46 878 aaPredicted RBP18.56■□□□□ 0.56
PHTF1-201ENST00000357783 CAMTA2O94983 1202 aa18.56■□□□□ 0.56
PHTF1-201ENST00000357783 TRDNQ13061 729 aa18.56■□□□□ 0.56
PHTF1-201ENST00000357783 NUTM2AQ8IVF1 878 aaPredicted RBP18.56■□□□□ 0.56
PHTF1-201ENST00000357783 PHLPP1O60346 1717 aa18.55■□□□□ 0.56
PHTF1-201ENST00000357783 ANO6Q4KMQ2 910 aa18.55■□□□□ 0.56
PHTF1-201ENST00000357783 SPATA5Q8NB90 893 aa18.55■□□□□ 0.56
PHTF1-201ENST00000357783 NKX2-3Q8TAU0 364 aa18.55■□□□□ 0.56
PHTF1-201ENST00000357783 ZNF396Q96N95 335 aaPredicted RBP18.55■□□□□ 0.56
PHTF1-201ENST00000357783 RCOR1Q9UKL0 485 aa18.55■□□□□ 0.56
PHTF1-201ENST00000357783 TCRBV5S4A2TA0A5A2 114 aa18.55■□□□□ 0.56
PHTF1-201ENST00000357783 RASGRF1Q13972 1273 aa18.55■□□□□ 0.56
PHTF1-201ENST00000357783 AIDAQ96BJ3 306 aa18.55■□□□□ 0.56
PHTF1-201ENST00000357783 NIP7Q9Y221 180 aaKnown RBP eCLIP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms