RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 BIRC3Q13489 604 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 KRT222Q8N1A0 295 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 PLEKHA4Q9H4M7 779 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 SDCCAG8Q86SQ7 713 aaPredicted RBP11.88□□□□□ -0.51
FXR1-202ENST00000357559 PRPHP41219 470 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 ATP11AP98196 1134 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 GOLGA1Q92805 767 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 NUF2Q9BZD4 464 aa11.88□□□□□ -0.51
FXR1-202ENST00000357559 ZFYP08048 801 aaPredicted RBP11.87□□□□□ -0.51
FXR1-202ENST00000357559 MAN1A1P33908 653 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 CTNND2Q9UQB3 1225 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 LDHCP07864 332 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 KIAA1524Q8TCG1 905 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 NBPF7P0C2Y1 421 aaPredicted RBP11.87□□□□□ -0.51
FXR1-202ENST00000357559 CCDC152Q4G0S7 254 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 CCDC184Q52MB2 194 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 PYM1Q9BRP8 204 aaKnown RBP11.87□□□□□ -0.51
FXR1-202ENST00000357559 SEL1L2Q5TEA6 688 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 C4orf50Q6ZRC1 276 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 NME9Q86XW9 330 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 CCDC169A6NNP5 214 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 ZYXQ15942 572 aaKnown RBP11.87□□□□□ -0.51
FXR1-202ENST00000357559 KCNH5Q8NCM2 988 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 TRIM31Q9BZY9 425 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 FAM204AQ9H8W3 233 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 USTQ9Y2C2 406 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 CFAP65Q6ZU64 1925 aaKnown RBP11.87□□□□□ -0.51
FXR1-202ENST00000357559 FGD6Q6ZV73 1430 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 PSMA7O14818 248 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 SORBS3O60504 671 aa11.87□□□□□ -0.51
FXR1-202ENST00000357559 PDIA4P13667 645 aaKnown RBP11.87□□□□□ -0.51
FXR1-202ENST00000357559 EIF6P56537 245 aaKnown RBP11.87□□□□□ -0.51
FXR1-202ENST00000357559 CHRNA2Q15822 529 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 CCDC89Q8N998 374 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 GTF3C6Q969F1 213 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 RRP36Q96EU6 259 aaKnown RBP11.86□□□□□ -0.51
FXR1-202ENST00000357559 PCK1P35558 622 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 GSDMBQ8TAX9 411 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 GIPC1O14908 333 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 IVLP07476 585 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 MAGEB6Q8N7X4 407 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 BRF1Q92994 677 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 CACYBPQ9HB71 228 aaKnown RBP11.86□□□□□ -0.51
FXR1-202ENST00000357559 RTL1A6NKG5 1358 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 USP48Q86UV5 1035 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 FAM83GA6ND36 823 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 ALDH3A1P30838 453 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 KRT2P35908 639 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 PRKG1Q13976 671 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 CCDC42Q96M95 316 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 MAGEB6P1A0A0J9YX57 407 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 BSPRYQ5W0U4 402 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 LMBR1Q8WVP7 490 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 NEDD9Q14511 834 aa11.86□□□□□ -0.51
FXR1-202ENST00000357559 CASQ2O14958 399 aaPredicted RBP11.85□□□□□ -0.51
FXR1-202ENST00000357559 NAA16Q6N069 864 aaPredicted RBP11.85□□□□□ -0.51
FXR1-202ENST00000357559 KRT23Q9C075 422 aa11.85□□□□□ -0.51
FXR1-202ENST00000357559 MSANTD4Q8NCY6 345 aa11.85□□□□□ -0.51
FXR1-202ENST00000357559 RAPGEF3O95398 923 aa11.85□□□□□ -0.51
FXR1-202ENST00000357559 ABL1P00519 1130 aa11.85□□□□□ -0.51
FXR1-202ENST00000357559 SPDYE16A6NNV3 312 aaPredicted RBP11.85□□□□□ -0.51
FXR1-202ENST00000357559 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
FXR1-202ENST00000357559 PRR16Q569H4 304 aa11.85□□□□□ -0.51
FXR1-202ENST00000357559 LACTBP83111 547 aaPredicted RBP11.85□□□□□ -0.51
FXR1-202ENST00000357559 FNBP1Q96RU3 617 aa11.85□□□□□ -0.51
FXR1-202ENST00000357559 FANCD2Q9BXW9 1451 aa11.85□□□□□ -0.51
FXR1-202ENST00000357559 BUB1BO60566 1050 aaPredicted RBP11.85□□□□□ -0.51
FXR1-202ENST00000357559 MGARPQ8TDB4 240 aa11.85□□□□□ -0.51
FXR1-202ENST00000357559 RIOK3O14730 519 aaKnown RBP11.85□□□□□ -0.51
FXR1-202ENST00000357559 CLUL1Q15846 466 aa11.85□□□□□ -0.51
FXR1-202ENST00000357559 CCDC186Q7Z3E2 898 aa11.85□□□□□ -0.51
FXR1-202ENST00000357559 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.85□□□□□ -0.51
FXR1-202ENST00000357559 SPOPO43791 374 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 RSRC1Q96IZ7 334 aaKnown RBP11.84□□□□□ -0.51
FXR1-202ENST00000357559 GPCPD1Q9NPB8 672 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 MAPK8IP1Q9UQF2 711 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 MTRF1LQ9UGC7 380 aaKnown RBP11.84□□□□□ -0.51
FXR1-202ENST00000357559 KRT86O43790 486 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 LONRF3Q496Y0 759 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 UTP14CQ5TAP6 766 aaKnown RBP11.84□□□□□ -0.51
FXR1-202ENST00000357559 DNM1Q05193 864 aaKnown RBP11.84□□□□□ -0.51
FXR1-202ENST00000357559 FOXD4Q12950 439 aaPredicted RBP11.84□□□□□ -0.51
FXR1-202ENST00000357559 TSTA3Q13630 321 aaPredicted RBP11.84□□□□□ -0.51
FXR1-202ENST00000357559 KRBA2Q6ZNG9 492 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 WDR44Q5JSH3 913 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.84□□□□□ -0.51
FXR1-202ENST00000357559 ESR2Q92731 530 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 TBC1D7Q9P0N9 293 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 PI4KAP2A4QPH2 592 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 CCNT1O60563 726 aaKnown RBP11.84□□□□□ -0.51
FXR1-202ENST00000357559 IFRD2Q12894 506 aaPredicted RBP11.84□□□□□ -0.51
FXR1-202ENST00000357559 PI4KAP1Q8N8J0 262 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 EMILIN1Q9Y6C2 1016 aa11.84□□□□□ -0.51
FXR1-202ENST00000357559 EBAG9O00559 213 aa11.83□□□□□ -0.52
FXR1-202ENST00000357559 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms