RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 PROSER3Q2NL68 480 aa14.4□□□□□ -0.1
BDNF-202ENST00000356660 DEF6Q9H4E7 631 aa14.4□□□□□ -0.1
BDNF-202ENST00000356660 LRP2BPQ9P2M1 347 aa14.4□□□□□ -0.1
BDNF-202ENST00000356660 PRR36Q9H6K5 1346 aa14.4□□□□□ -0.1
BDNF-202ENST00000356660 SETBP1Q9Y6X0 1596 aa14.4□□□□□ -0.1
BDNF-202ENST00000356660 CHGBP05060 677 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 CALRP27797 417 aaKnown RBP14.39□□□□□ -0.11
BDNF-202ENST00000356660 TDO2P48775 406 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 EIF4A1P60842 406 aaKnown RBP14.39□□□□□ -0.11
BDNF-202ENST00000356660 RBM6P78332 1123 aaKnown RBP14.39□□□□□ -0.11
BDNF-202ENST00000356660 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.39□□□□□ -0.11
BDNF-202ENST00000356660 ADGRB3O60242 1522 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 REREQ9P2R6 1566 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 HOXC9P31274 260 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 STX17P56962 302 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 SLFNL1Q499Z3 407 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 MEX3CQ5U5Q3 659 aaKnown RBP14.39□□□□□ -0.11
BDNF-202ENST00000356660 SMARCE1Q969G3 411 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 CLIC4Q9Y696 253 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 IBSPP21815 317 aaPredicted RBP14.39□□□□□ -0.11
BDNF-202ENST00000356660 CCZ1BP86790 482 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 CCZ1P86791 482 aaPredicted RBP14.39□□□□□ -0.11
BDNF-202ENST00000356660 KIAA1210Q9ULL0 1709 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 TNRQ92752 1358 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 ADGRB1O14514 1584 aa14.39□□□□□ -0.11
BDNF-202ENST00000356660 ALG1Q9BT22 464 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 GJB4Q9NTQ9 266 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 RCOR1Q9UKL0 485 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 UHRF1BP1LA0JNW5 1464 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 NAA16Q6N069 864 aaPredicted RBP14.38□□□□□ -0.11
BDNF-202ENST00000356660 ANKRD13DQ6ZTN6 518 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 SASH1O94885 1247 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 ATP2B2Q01814 1243 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 COL9A3Q14050 684 aaPredicted RBP14.38□□□□□ -0.11
BDNF-202ENST00000356660 ZNF569Q5MCW4 686 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 LMBR1LQ6UX01 489 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 MINDY4BA8MYZ0 360 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 ANKRD65E5RJM6 399 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 ZNF213O14771 459 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 NLRP12P59046 1061 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 ST3GAL1Q11201 340 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 E4F1Q66K89 784 aaPredicted RBP14.38□□□□□ -0.11
BDNF-202ENST00000356660 CCDC70Q6NSX1 233 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 TRMT44Q8IYL2 757 aaKnown RBP14.38□□□□□ -0.11
BDNF-202ENST00000356660 NFATC2IPQ8NCF5 419 aa14.38□□□□□ -0.11
BDNF-202ENST00000356660 GOLGA6L9A6NEM1 432 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 PRC1O43663 620 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 PNOCQ13519 176 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 ADALQ6DHV7 355 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 SARM1Q6SZW1 724 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 BANK1Q8NDB2 785 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 NSUN7Q8NE18 718 aaKnown RBP14.37□□□□□ -0.11
BDNF-202ENST00000356660 RUFY1Q96T51 708 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 RABEP2Q9H5N1 569 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 TMOD3Q9NYL9 352 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 DACH1Q9UI36 760 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 TTC21AQ8NDW8 1320 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 PRAMEF22A3QJZ6 481 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 PSDA5PKW4 1024 aaPredicted RBP14.37□□□□□ -0.11
BDNF-202ENST00000356660 WDHD1O75717 1129 aaPredicted RBP14.37□□□□□ -0.11
BDNF-202ENST00000356660 LRRN4CLQ8ND94 238 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 FANCLQ9NW38 375 aa14.37□□□□□ -0.11
BDNF-202ENST00000356660 TUBB4AP04350 444 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 XBP1P17861 261 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 RAD51AP2Q09MP3 1159 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 ANO1Q5XXA6 986 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 LLPHQ9BRT6 129 aaKnown RBP14.36□□□□□ -0.11
BDNF-202ENST00000356660 PAG1Q9NWQ8 432 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 ZCCHC11Q5TAX3 1644 aaKnown RBP14.36□□□□□ -0.11
BDNF-202ENST00000356660 METP08581 1390 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 STARD3NLO95772 234 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 PFKFB1P16118 471 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 AFMP43652 599 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 SETQ01105 290 aaPredicted RBP14.36□□□□□ -0.11
BDNF-202ENST00000356660 IFIT5Q13325 482 aaKnown RBP14.36□□□□□ -0.11
BDNF-202ENST00000356660 TNNI3KQ59H18 835 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 AIDAQ96BJ3 306 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 CRACR2AQ9BSW2 395 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 TRMT112Q9UI30 125 aaKnown RBP14.36□□□□□ -0.11
BDNF-202ENST00000356660 FPGT-TNNI3KV9GXZ4 949 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 CCDC175P0C221 793 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 ST5P78524 1137 aa14.36□□□□□ -0.11
BDNF-202ENST00000356660 DHX40Q8IX18 779 aaKnown RBP14.36□□□□□ -0.11
BDNF-202ENST00000356660 GPHNQ9NQX3 736 aaPredicted RBP14.36□□□□□ -0.11
BDNF-202ENST00000356660 CHMP4BP1P59074 171 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 ARMCX5Q6P1M9 558 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 NACAP1Q9BZK3 213 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 PPP2R2CQ9Y2T4 447 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 EFCAB8A8MWE9 144 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 METAP2P50579 478 aaKnown RBP eCLIP14.35□□□□□ -0.11
BDNF-202ENST00000356660 LDHAL6AQ6ZMR3 332 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 TRIM22Q8IYM9 498 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 IFNL2Q8IZJ0 200 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 SMARCC1Q92922 1105 aaPredicted RBP14.35□□□□□ -0.11
BDNF-202ENST00000356660 GDAP1L1Q96MZ0 367 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 ATP7BP35670 1465 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 NRXN1Q9ULB1 1477 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 ARHGAP6O43182 974 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 ZNF827Q17R98 1081 aa14.35□□□□□ -0.11
BDNF-202ENST00000356660 NYAP1Q6ZVC0 841 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms