RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 HDAC9Q9UKV0 1011 aa16.78■□□□□ 0.28
LMX1B-201ENST00000355497 NAA16Q6N069 864 aaPredicted RBP16.78■□□□□ 0.28
LMX1B-201ENST00000355497 HS2ST1Q7LGA3 356 aa16.78■□□□□ 0.28
LMX1B-201ENST00000355497 MAK16Q9BXY0 300 aaKnown RBP16.78■□□□□ 0.28
LMX1B-201ENST00000355497 SPDYE3A6NKU9 549 aa16.78■□□□□ 0.28
LMX1B-201ENST00000355497 PDE1AP54750 535 aa16.78■□□□□ 0.28
LMX1B-201ENST00000355497 NKIRAS1Q9NYS0 192 aa16.78■□□□□ 0.28
LMX1B-201ENST00000355497 PICALMQ13492 652 aa16.78■□□□□ 0.28
LMX1B-201ENST00000355497 FMNL3Q8IVF7 1028 aa16.78■□□□□ 0.28
LMX1B-201ENST00000355497 XRCC6P12956 609 aaKnown RBP eCLIP16.77■□□□□ 0.28
LMX1B-201ENST00000355497 STX17P56962 302 aa16.77■□□□□ 0.28
LMX1B-201ENST00000355497 ARHGAP45Q92619 1136 aa16.77■□□□□ 0.28
LMX1B-201ENST00000355497 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.77■□□□□ 0.28
LMX1B-201ENST00000355497 MAGEB6P1A0A0J9YX57 407 aa16.77■□□□□ 0.28
LMX1B-201ENST00000355497 IFNKQ9P0W0 207 aa16.77■□□□□ 0.27
LMX1B-201ENST00000355497 LUC7L2Q9Y383 392 aaKnown RBP16.77■□□□□ 0.27
LMX1B-201ENST00000355497 GAS8O95995 478 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
LMX1B-201ENST00000355497 GBP6Q6ZN66 633 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 CCDC26Q8TAB7 109 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 SNX21Q969T3 373 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 VTI1AQ96AJ9 217 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 FAM83GA6ND36 823 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 KIF3CO14782 793 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 B4DLN1 442 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 GNAT2P19087 354 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 MCM7P33993 719 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 MRPL12P52815 198 aaKnown RBP16.76■□□□□ 0.27
LMX1B-201ENST00000355497 ATP11AP98196 1134 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 CNGA4Q8IV77 575 aa16.76■□□□□ 0.27
LMX1B-201ENST00000355497 SLC9C2Q5TAH2 1124 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 CEP128Q6ZU80 1094 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 GPR161Q8N6U8 529 aaKnown RBP16.75■□□□□ 0.27
LMX1B-201ENST00000355497 OGFRQ9NZT2 677 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 INF2Q27J81 1249 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 CCT6BQ92526 530 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 IFT74Q96LB3 600 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 TNNI2P48788 182 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 ZNF804AQ7Z570 1209 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 CRCPO75575 148 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 PRIM1P49642 420 aaKnown RBP16.75■□□□□ 0.27
LMX1B-201ENST00000355497 FYB2Q5VWT5 728 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 PAG1Q9NWQ8 432 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 CHPF2Q9P2E5 772 aa16.75■□□□□ 0.27
LMX1B-201ENST00000355497 F8W031 263 aaPredicted RBP16.74■□□□□ 0.27
LMX1B-201ENST00000355497 RAPGEF1Q13905 1077 aa16.74■□□□□ 0.27
LMX1B-201ENST00000355497 BRAPQ7Z569 592 aa16.74■□□□□ 0.27
LMX1B-201ENST00000355497 CEP120Q8N960 986 aa16.74■□□□□ 0.27
LMX1B-201ENST00000355497 IL15P40933 162 aaPredicted RBP16.74■□□□□ 0.27
LMX1B-201ENST00000355497 CEP85LQ5SZL2 805 aa16.74■□□□□ 0.27
LMX1B-201ENST00000355497 AKNAD1Q5T1N1 836 aa16.74■□□□□ 0.27
LMX1B-201ENST00000355497 HS1BP3Q53T59 392 aa16.74■□□□□ 0.27
LMX1B-201ENST00000355497 MIPOL1Q8TD10 442 aa16.74■□□□□ 0.27
LMX1B-201ENST00000355497 FOXO3O43524 673 aa16.74■□□□□ 0.27
LMX1B-201ENST00000355497 CCDC122Q5T0U0 273 aa16.74■□□□□ 0.27
LMX1B-201ENST00000355497 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.74■□□□□ 0.27
LMX1B-201ENST00000355497 IRX3P78415 501 aaPredicted RBP16.74■□□□□ 0.27
LMX1B-201ENST00000355497 PLS1Q14651 629 aa16.74■□□□□ 0.27
LMX1B-201ENST00000355497 UAP1Q16222 522 aaPredicted RBP16.74■□□□□ 0.27
LMX1B-201ENST00000355497 CSRNP2Q9H175 543 aa16.74■□□□□ 0.27
LMX1B-201ENST00000355497 VIMP08670 466 aaKnown RBP16.73■□□□□ 0.27
LMX1B-201ENST00000355497 NAA25Q14CX7 972 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 DTHD1Q6ZMT9 781 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 MEIS3Q99687 375 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 FAM184BQ9ULE4 1060 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 SBNO2Q9Y2G9 1366 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 AKR1B15C9JRZ8 316 aaPredicted RBP16.73■□□□□ 0.27
LMX1B-201ENST00000355497 RPL13P26373 211 aaKnown RBP16.73■□□□□ 0.27
LMX1B-201ENST00000355497 CLUL1Q15846 466 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 AMOTL2Q9Y2J4 779 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 CACNA2D3Q8IZS8 1091 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 SWAP70Q9UH65 585 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 IQSEC3Q9UPP2 1182 aaPredicted RBP16.73■□□□□ 0.27
LMX1B-201ENST00000355497 ALDH1L1O75891 902 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 ERCC6LQ2NKX8 1250 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 DCAF17Q5H9S7 520 aaPredicted RBP16.73■□□□□ 0.27
LMX1B-201ENST00000355497 VPS52Q8N1B4 723 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 AFAP1L1Q8TED9 768 aa16.73■□□□□ 0.27
LMX1B-201ENST00000355497 RNF113AO15541 343 aaKnown RBP16.72■□□□□ 0.27
LMX1B-201ENST00000355497 ATP8B2P98198 1209 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 PPP2R3AQ06190 1150 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 KRT28Q7Z3Y7 464 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 C10orf67Q8IYJ2 551 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 NGLY1Q96IV0 654 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 NAP1L4Q99733 375 aaKnown RBP16.72■□□□□ 0.27
LMX1B-201ENST00000355497 BAG1Q99933 345 aaPredicted RBP16.72■□□□□ 0.27
LMX1B-201ENST00000355497 ANKRD36BQ8N2N9 1353 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 C11orf95C9JLR9 678 aaPredicted RBP16.72■□□□□ 0.27
LMX1B-201ENST00000355497 GNA11P29992 359 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 B4GALNT4Q76KP1 1039 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 NEDD9Q14511 834 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 PLCD3Q8N3E9 789 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 ZBTB9Q96C00 473 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 ANXA1P04083 346 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 APOBRQ0VD83 1088 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 LEO1Q8WVC0 666 aaPredicted RBP16.72■□□□□ 0.27
LMX1B-201ENST00000355497 KIFAP3Q92845 792 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 RASSF4Q9H2L5 321 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 AGTPBP1Q9UPW5 1226 aa16.72■□□□□ 0.27
LMX1B-201ENST00000355497 FRMD4BQ9Y2L6 1034 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms