RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 PTGS1P23219 599 aa12.93□□□□□ -0.34
NUDCD3-202ENST00000355451 CYLC1P35663 651 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-202ENST00000355451 UBE3BQ7Z3V4 1068 aa12.93□□□□□ -0.34
NUDCD3-202ENST00000355451 SCAPERQ9BY12 1400 aa12.93□□□□□ -0.34
NUDCD3-202ENST00000355451 TMC6Q7Z403 805 aa12.93□□□□□ -0.34
NUDCD3-202ENST00000355451 POMGNT1Q8WZA1 660 aa12.93□□□□□ -0.34
NUDCD3-202ENST00000355451 MRRFQ96E11 262 aaKnown RBP12.93□□□□□ -0.34
NUDCD3-202ENST00000355451 PYGLP06737 847 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 NFKBIL1Q9UBC1 381 aaPredicted RBP12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 LDHAL6AQ6ZMR3 332 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 ZSWIM4Q9H7M6 989 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 AMOTL2Q9Y2J4 779 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 ZNF853P0CG23 659 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 NEDD9Q14511 834 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 RYBPQ8N488 228 aaPredicted RBP12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 KIF1BPQ96EK5 621 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 NOX5Q96PH1 765 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 MTUS1Q9ULD2 1270 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 CCDC169A6NNP5 214 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 PFDN6O15212 129 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 IFRD2Q12894 506 aaPredicted RBP12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 MTRF1LQ9UGC7 380 aaKnown RBP12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 BZW2Q9Y6E2 419 aaKnown RBP12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 LEO1Q8WVC0 666 aaPredicted RBP12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 TNIKQ9UKE5 1360 aa12.92□□□□□ -0.34
NUDCD3-202ENST00000355451 DNM2P50570 870 aa12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 DCAF17Q5H9S7 520 aaPredicted RBP12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 FSIP1Q8NA03 581 aa12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 INTS8Q75QN2 995 aaKnown RBP12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 ATP5J2-PTCD1G3V325 749 aa12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 SYF2O95926 243 aaKnown RBP12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 SEL1L2Q5TEA6 688 aa12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 TDRD9Q8NDG6 1382 aaKnown RBP12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 AFMP43652 599 aa12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 EXOSC9Q06265 439 aaKnown RBP12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 CDCA7Q9BWT1 371 aaPredicted RBP12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 MARCKSP29966 332 aaPredicted RBP12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 ASIC1P78348 528 aa12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 FYB2Q5VWT5 728 aa12.91□□□□□ -0.34
NUDCD3-202ENST00000355451 PRKG1Q13976 671 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 PRPF40BQ6NWY9 871 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 GSTA1P08263 222 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 GSTA2P09210 222 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 CPLX4Q7Z7G2 160 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 MCM7P33993 719 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 CEP128Q6ZU80 1094 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 RRP36Q96EU6 259 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 SH2D4AQ9H788 454 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 PTPRGP23470 1445 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 GLRX3O76003 335 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 ACSBG1Q96GR2 724 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 TRAIPQ9BWF2 469 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 ZNF277Q9NRM2 450 aaPredicted RBP12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 ABI1Q8IZP0 508 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 WTAPQ15007 396 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 CEP57Q86XR8 500 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 CACNA2D3Q8IZS8 1091 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 AZI2Q9H6S1 392 aa12.9□□□□□ -0.34
NUDCD3-202ENST00000355451 PPFIA3O75145 1194 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 KRT19P08727 400 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 PDE3AQ14432 1141 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 RRS1Q15050 365 aaKnown RBP12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 CCDC121Q6ZUS5 278 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 PRPF38AQ8NAV1 312 aaKnown RBP12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 RAB11FIP3O75154 756 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 ATP6V1AP38606 617 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 ELMSAN1Q6PJG2 1045 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 SCAND2PQ9GZW5 306 aaPredicted RBP12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 RTEL1Q9NZ71 1219 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 RRAGBQ5VZM2 374 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 IFT81Q8WYA0 676 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 CALCOCO1Q9P1Z2 691 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 PRPF6O94906 941 aaKnown RBP12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 PDCD2Q16342 344 aaPredicted RBP12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 SND1Q7KZF4 910 aaKnown RBP eCLIP12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 NR1H4Q96RI1 486 aaPredicted RBP12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 TOM1O60784 492 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 NLRP3Q96P20 1036 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 VCX3AQ9NNX9 186 aa12.89□□□□□ -0.35
NUDCD3-202ENST00000355451 TLDC2A0PJX2 215 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 ATP5DP30049 168 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 CCDC68Q9H2F9 335 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 NKIRAS1Q9NYS0 192 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 SAMD15Q9P1V8 674 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 SYCE3A1L190 88 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 GOLGA8CPA6NN73 597 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 RAP1GDS1P52306 607 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 NEK11Q8NG66 645 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 ATP11AP98196 1134 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 LCA5Q86VQ0 697 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 ZBTB3Q9H5J0 574 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 LRPPRCP42704 1394 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 IVLP07476 585 aa12.88□□□□□ -0.35
NUDCD3-202ENST00000355451 GNAQP50148 359 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms