RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 TNNI3KQ59H18 835 aa18.61■□□□□ 0.57
SHTN1-202ENST00000355371 FPGT-TNNI3KV9GXZ4 949 aa18.61■□□□□ 0.57
SHTN1-202ENST00000355371 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
SHTN1-202ENST00000355371 RPS6KB1P23443 525 aa18.61■□□□□ 0.57
SHTN1-202ENST00000355371 MICALCLQ6ZW33 695 aa18.61■□□□□ 0.57
SHTN1-202ENST00000355371 ZKSCAN5Q9Y2L8 839 aa18.61■□□□□ 0.57
SHTN1-202ENST00000355371 PTPRTO14522 1441 aa18.61■□□□□ 0.57
SHTN1-202ENST00000355371 PICALMQ13492 652 aa18.61■□□□□ 0.57
SHTN1-202ENST00000355371 SMC1AQ14683 1233 aaKnown RBP18.61■□□□□ 0.57
SHTN1-202ENST00000355371 ARHGEF10O15013 1369 aa18.61■□□□□ 0.57
SHTN1-202ENST00000355371 BICDL2A1A5D9 508 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 LDHBP07195 334 aaKnown RBP18.6■□□□□ 0.57
SHTN1-202ENST00000355371 SMARCC2Q8TAQ2 1214 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 KDM2BQ8NHM5 1336 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 MACROD2A1Z1Q3 448 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 SPECC1Q5M775 1068 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 KRT79Q5XKE5 535 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 MIGA1Q8NAN2 632 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 HELBQ8NG08 1087 aaPredicted RBP18.6■□□□□ 0.57
SHTN1-202ENST00000355371 ZC3H12CQ9C0D7 883 aaKnown RBP18.6■□□□□ 0.57
SHTN1-202ENST00000355371 SYT1P21579 422 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 CHST3Q7LGC8 479 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 FAM107BQ9H098 131 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 SAMD9Q5K651 1589 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 SEC24BO95487 1268 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 KRT13P13646 458 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 PLVAPQ9BX97 442 aa18.6■□□□□ 0.57
SHTN1-202ENST00000355371 SRRTQ9BXP5 876 aaKnown RBP18.6■□□□□ 0.57
SHTN1-202ENST00000355371 CHMP4BP1P59074 171 aa18.59■□□□□ 0.57
SHTN1-202ENST00000355371 CTR9Q6PD62 1173 aa18.59■□□□□ 0.57
SHTN1-202ENST00000355371 F8W031 263 aaPredicted RBP18.59■□□□□ 0.57
SHTN1-202ENST00000355371 PRPF4BQ13523 1007 aaKnown RBP18.59■□□□□ 0.57
SHTN1-202ENST00000355371 TMEM87BQ96K49 555 aa18.59■□□□□ 0.57
SHTN1-202ENST00000355371 LLPHQ9BRT6 129 aaKnown RBP18.59■□□□□ 0.57
SHTN1-202ENST00000355371 KIAA0232Q92628 1395 aa18.59■□□□□ 0.57
SHTN1-202ENST00000355371 SBNO2Q9Y2G9 1366 aa18.59■□□□□ 0.57
SHTN1-202ENST00000355371 A0A1B0GUL7 405 aa18.59■□□□□ 0.57
SHTN1-202ENST00000355371 UBAP1LF5GYI3 381 aa18.59■□□□□ 0.57
SHTN1-202ENST00000355371 BICD1Q96G01 975 aa18.59■□□□□ 0.57
SHTN1-202ENST00000355371 C8orf37Q96NL8 207 aa18.59■□□□□ 0.57
SHTN1-202ENST00000355371 EYA3Q99504 573 aa18.58■□□□□ 0.57
SHTN1-202ENST00000355371 NAP1L4Q99733 375 aaKnown RBP18.58■□□□□ 0.57
SHTN1-202ENST00000355371 GOLGA6L10A0A0M3HER8 536 aa18.58■□□□□ 0.56
SHTN1-202ENST00000355371 CTAGE15A4D2H0 777 aa18.58■□□□□ 0.56
SHTN1-202ENST00000355371 POLR3GO15318 223 aaPredicted RBP18.58■□□□□ 0.56
SHTN1-202ENST00000355371 CCDC175P0C221 793 aa18.58■□□□□ 0.56
SHTN1-202ENST00000355371 CTAGE8P0CG41 777 aa18.58■□□□□ 0.56
SHTN1-202ENST00000355371 KRT83P78385 493 aa18.58■□□□□ 0.56
SHTN1-202ENST00000355371 PUM3Q15397 648 aaKnown RBP18.58■□□□□ 0.56
SHTN1-202ENST00000355371 CTAGE6Q86UF2 777 aa18.58■□□□□ 0.56
SHTN1-202ENST00000355371 CTAGE4Q8IX94 777 aa18.58■□□□□ 0.56
SHTN1-202ENST00000355371 SLC52A2Q9HAB3 445 aa18.58■□□□□ 0.56
SHTN1-202ENST00000355371 MBD4O95243 580 aa18.57■□□□□ 0.56
SHTN1-202ENST00000355371 SLC27A2O14975 620 aa18.57■□□□□ 0.56
SHTN1-202ENST00000355371 INCENPQ9NQS7 918 aa18.57■□□□□ 0.56
SHTN1-202ENST00000355371 BCCIPQ9P287 314 aaKnown RBP eCLIP18.57■□□□□ 0.56
SHTN1-202ENST00000355371 SPDYE3A6NKU9 549 aa18.57■□□□□ 0.56
SHTN1-202ENST00000355371 PRPHP41219 470 aa18.57■□□□□ 0.56
SHTN1-202ENST00000355371 IQUBQ8NA54 791 aa18.57■□□□□ 0.56
SHTN1-202ENST00000355371 DDX12PQ92771 950 aa18.57■□□□□ 0.56
SHTN1-202ENST00000355371 ZNF830Q96NB3 372 aaPredicted RBP18.57■□□□□ 0.56
SHTN1-202ENST00000355371 NSFL1CQ9UNZ2 370 aaKnown RBP18.57■□□□□ 0.56
SHTN1-202ENST00000355371 USP19O94966 1318 aa18.57■□□□□ 0.56
SHTN1-202ENST00000355371 IBSPP21815 317 aaPredicted RBP18.57■□□□□ 0.56
SHTN1-202ENST00000355371 DNAI1Q9UI46 699 aa18.57■□□□□ 0.56
SHTN1-202ENST00000355371 SH3TC1Q8TE82 1336 aa18.56■□□□□ 0.56
SHTN1-202ENST00000355371 ITGA6P23229 1130 aa18.56■□□□□ 0.56
SHTN1-202ENST00000355371 CALRP27797 417 aaKnown RBP18.56■□□□□ 0.56
SHTN1-202ENST00000355371 ELP1O95163 1332 aa18.56■□□□□ 0.56
SHTN1-202ENST00000355371 TACC1O75410 805 aa18.56■□□□□ 0.56
SHTN1-202ENST00000355371 LMOD1P29536 600 aaPredicted RBP18.56■□□□□ 0.56
SHTN1-202ENST00000355371 TUBB4BP68371 445 aa18.56■□□□□ 0.56
SHTN1-202ENST00000355371 DTHD1Q6ZMT9 781 aa18.56■□□□□ 0.56
SHTN1-202ENST00000355371 PLEKHG3A1L390 1219 aa18.56■□□□□ 0.56
SHTN1-202ENST00000355371 PDE8AO60658 829 aa18.56■□□□□ 0.56
SHTN1-202ENST00000355371 CALCOCO1Q9P1Z2 691 aa18.56■□□□□ 0.56
SHTN1-202ENST00000355371 KIAA0753Q2KHM9 967 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 TRMT1LQ7Z2T5 733 aaKnown RBP18.55■□□□□ 0.56
SHTN1-202ENST00000355371 TTC6Q86TZ1 520 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 SGSM2O43147 1006 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 APPBP2Q92624 585 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 SELENOOQ9BVL4 669 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 FAM160A1Q05DH4 1040 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 RILPL1Q5EBL4 403 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 CEP112Q8N8E3 955 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 BBXQ8WY36 941 aaPredicted RBP18.55■□□□□ 0.56
SHTN1-202ENST00000355371 FAM89AQ96GI7 184 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 PLCD4Q9BRC7 762 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 ADGBQ8N7X0 1667 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 RBM17Q96I25 401 aaKnown RBP18.55■□□□□ 0.56
SHTN1-202ENST00000355371 BTG4Q9NY30 223 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 SNX14Q9Y5W7 946 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 PARP3Q9Y6F1 533 aa18.55■□□□□ 0.56
SHTN1-202ENST00000355371 HSP90AA4PQ58FG1 418 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 OTUD7AQ8TE49 926 aaPredicted RBP18.54■□□□□ 0.56
SHTN1-202ENST00000355371 MAATS1Q7Z4T9 603 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 FERMT1Q9BQL6 677 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 PUF60Q9UHX1 559 aaKnown RBP18.54■□□□□ 0.56
SHTN1-202ENST00000355371 ARHGEF5Q12774 1597 aa18.54■□□□□ 0.56
SHTN1-202ENST00000355371 MCM7P33993 719 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms