RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 FAM200AQ8TCP9 573 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 ZBTB9Q96C00 473 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 SLAIN2Q9P270 581 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 ZBTB1Q9Y2K1 713 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 C5P01031 1676 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 CPLX1O14810 134 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 PRC1O43663 620 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 ADAMTS2O95450 1211 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 FDPSP14324 419 aaKnown RBP16.14■□□□□ 0.17
EBF3-201ENST00000355311 KRT32Q14532 448 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 ZMYM1Q5SVZ6 1142 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 MCAMP43121 646 aa16.14■□□□□ 0.17
EBF3-201ENST00000355311 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.14■□□□□ 0.17
EBF3-201ENST00000355311 V9GYY5 206 aaPredicted RBP16.14■□□□□ 0.17
EBF3-201ENST00000355311 FOXP2O15409 715 aa16.13■□□□□ 0.17
EBF3-201ENST00000355311 GPAA1O43292 621 aa16.13■□□□□ 0.17
EBF3-201ENST00000355311 EPB41L2O43491 1005 aaKnown RBP16.13■□□□□ 0.17
EBF3-201ENST00000355311 KIF20AO95235 890 aa16.13■□□□□ 0.17
EBF3-201ENST00000355311 PHKA1P46020 1223 aa16.13■□□□□ 0.17
EBF3-201ENST00000355311 SEC31BQ9NQW1 1179 aa16.13■□□□□ 0.17
EBF3-201ENST00000355311 hCG_1642624A0A1W2PR95 340 aa16.13■□□□□ 0.17
EBF3-201ENST00000355311 B4E1Z4 1266 aa16.13■□□□□ 0.17
EBF3-201ENST00000355311 ILDR1Q86SU0 546 aaPredicted RBP16.13■□□□□ 0.17
EBF3-201ENST00000355311 JAG2Q9Y219 1238 aa16.13■□□□□ 0.17
EBF3-201ENST00000355311 NCAPD2Q15021 1401 aa16.12■□□□□ 0.17
EBF3-201ENST00000355311 LETM1O95202 739 aaPredicted RBP16.12■□□□□ 0.17
EBF3-201ENST00000355311 CTDSPL2Q05D32 466 aa16.12■□□□□ 0.17
EBF3-201ENST00000355311 TCIRG1Q13488 830 aa16.12■□□□□ 0.17
EBF3-201ENST00000355311 MIGA1Q8NAN2 632 aa16.12■□□□□ 0.17
EBF3-201ENST00000355311 TRERF1Q96PN7 1200 aa16.12■□□□□ 0.17
EBF3-201ENST00000355311 SLC4A9Q96Q91 983 aa16.12■□□□□ 0.17
EBF3-201ENST00000355311 ORC3Q9UBD5 711 aaPredicted RBP16.12■□□□□ 0.17
EBF3-201ENST00000355311 BECN2A8MW95 431 aa16.12■□□□□ 0.17
EBF3-201ENST00000355311 GTF2F1P35269 517 aaKnown RBP eCLIP16.12■□□□□ 0.17
EBF3-201ENST00000355311 CCDC191Q8NCU4 936 aa16.12■□□□□ 0.17
EBF3-201ENST00000355311 MST1RQ04912 1400 aa16.12■□□□□ 0.17
EBF3-201ENST00000355311 KIF6Q6ZMV9 814 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 BICDL1Q6ZP65 573 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 RALYLQ86SE5 291 aaKnown RBP16.11■□□□□ 0.17
EBF3-201ENST00000355311 CLIP2Q9UDT6 1046 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 WWC3Q9ULE0 1092 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 WDR17Q8IZU2 1322 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 PCDH11XQ9BZA7 1347 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 PCDH11YQ9BZA8 1340 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 PRKAB2O43741 272 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 PALLDQ8WX93 1383 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 KIF28PB7ZC32 967 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 ZNF213O14771 459 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 PFKFB2O60825 505 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 CLSTN2Q9H4D0 955 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 PIH1D3Q9NQM4 214 aaKnown RBP16.11■□□□□ 0.17
EBF3-201ENST00000355311 PCDHA7Q9UN72 937 aa16.11■□□□□ 0.17
EBF3-201ENST00000355311 GOLGA6L19H0YKK7 550 aa16.1■□□□□ 0.17
EBF3-201ENST00000355311 IRS4O14654 1257 aaPredicted RBP16.1■□□□□ 0.17
EBF3-201ENST00000355311 NDUFA8P51970 172 aa16.1■□□□□ 0.17
EBF3-201ENST00000355311 EXOSC10Q01780 885 aaKnown RBP16.1■□□□□ 0.17
EBF3-201ENST00000355311 UVSSAQ2YD98 709 aa16.1■□□□□ 0.17
EBF3-201ENST00000355311 ATG3Q9NT62 314 aa16.1■□□□□ 0.17
EBF3-201ENST00000355311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.1■□□□□ 0.17
EBF3-201ENST00000355311 BAZ2BQ9UIF8 2168 aaKnown RBP16.1■□□□□ 0.17
EBF3-201ENST00000355311 ERICH4A6NGS2 130 aa16.1■□□□□ 0.17
EBF3-201ENST00000355311 GOLGA8FQ08AF8 430 aa16.1■□□□□ 0.17
EBF3-201ENST00000355311 GOLGA8DPQ0D2H9 430 aa16.1■□□□□ 0.17
EBF3-201ENST00000355311 STK38Q15208 465 aa16.1■□□□□ 0.17
EBF3-201ENST00000355311 NFXL1Q6ZNB6 911 aa16.1■□□□□ 0.17
EBF3-201ENST00000355311 AOPEPQ8N6M6 819 aa16.1■□□□□ 0.17
EBF3-201ENST00000355311 CACTINQ8WUQ7 758 aaKnown RBP16.1■□□□□ 0.17
EBF3-201ENST00000355311 C8orf76Q96K31 380 aa16.1■□□□□ 0.17
EBF3-201ENST00000355311 EP400Q96L91 3159 aa16.09■□□□□ 0.17
EBF3-201ENST00000355311 USP27XA6NNY8 438 aa16.09■□□□□ 0.17
EBF3-201ENST00000355311 GNL2Q13823 731 aaKnown RBP16.09■□□□□ 0.17
EBF3-201ENST00000355311 IMMTQ16891 758 aaKnown RBP16.09■□□□□ 0.17
EBF3-201ENST00000355311 CCDC73Q6ZRK6 1079 aa16.09■□□□□ 0.17
EBF3-201ENST00000355311 KINO60870 393 aaKnown RBP16.09■□□□□ 0.17
EBF3-201ENST00000355311 ANTXR2P58335 489 aa16.09■□□□□ 0.17
EBF3-201ENST00000355311 CYB5R4Q7L1T6 521 aa16.09■□□□□ 0.17
EBF3-201ENST00000355311 KIAA1524Q8TCG1 905 aa16.09■□□□□ 0.17
EBF3-201ENST00000355311 CLIC6Q96NY7 704 aa16.09■□□□□ 0.17
EBF3-201ENST00000355311 NUTM2BA6NNL0 878 aaPredicted RBP16.08■□□□□ 0.17
EBF3-201ENST00000355311 NUTM2EB1AL46 878 aaPredicted RBP16.08■□□□□ 0.17
EBF3-201ENST00000355311 NUTM2AQ8IVF1 878 aaPredicted RBP16.08■□□□□ 0.17
EBF3-201ENST00000355311 CFAP45Q9UL16 551 aa16.08■□□□□ 0.17
EBF3-201ENST00000355311 NCBP1Q09161 790 aaKnown RBP16.08■□□□□ 0.16
EBF3-201ENST00000355311 TBC1D10CQ8IV04 446 aa16.08■□□□□ 0.16
EBF3-201ENST00000355311 HELLSQ9NRZ9 838 aa16.08■□□□□ 0.16
EBF3-201ENST00000355311 TSGA10IPQ3SY00 556 aa16.08■□□□□ 0.16
EBF3-201ENST00000355311 TTLL11Q8NHH1 800 aa16.08■□□□□ 0.16
EBF3-201ENST00000355311 ARMT1Q9H993 441 aa16.08■□□□□ 0.16
EBF3-201ENST00000355311 ABCF2Q9UG63 623 aa16.08■□□□□ 0.16
EBF3-201ENST00000355311 CHAF1AQ13111 956 aaPredicted RBP16.07■□□□□ 0.16
EBF3-201ENST00000355311 ST7Q9NRC1 585 aa16.07■□□□□ 0.16
EBF3-201ENST00000355311 SPTLC3Q9NUV7 552 aa16.07■□□□□ 0.16
EBF3-201ENST00000355311 ZNF532Q9HCE3 1301 aa16.07■□□□□ 0.16
EBF3-201ENST00000355311 SNW1Q13573 536 aaKnown RBP16.07■□□□□ 0.16
EBF3-201ENST00000355311 TMX1Q9H3N1 280 aa16.07■□□□□ 0.16
EBF3-201ENST00000355311 MTMR7Q9Y216 660 aa16.07■□□□□ 0.16
EBF3-201ENST00000355311 SLIT3O75094 1523 aa16.07■□□□□ 0.16
EBF3-201ENST00000355311 CAMTA1Q9Y6Y1 1673 aa16.06■□□□□ 0.16
EBF3-201ENST00000355311 CARMIL3Q8ND23 1372 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms